BAC Information

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BAC

Clone NameB6Ng01-104P22
ChromosomeX (Build37)2 (Build37)
Map Location 122,841,862 - 122,842,864101,657,638 - 101,657,691
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG665522, LOC100038969, LOC100038978, EG665579, EG665611, EG626048, LOC100040410
Downstream geneLOC100039903, LOC665679, 4932411N23Rik, Gm381, LOC100040472, Gm382
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104P22.bB6Ng01-104P22.g
ACCDH913134DH913135
length1,005922
definitionDH913134|Mus musculus domesticus DNA, BAC clone: B6Ng01-104P22, 5' end.DH913135|Mus musculus domesticus DNA, BAC clone: B6Ng01-104P22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(122,841,862 - 122,842,864)(101,657,638 - 101,657,691)
sequence
gaattcaaagatatataaaaatatcaccccaaagatgaagtagagttcat
tttacatatgcagggatggatcaacatacaaaactctttcactgtaatct
accatgtaagcaaactaaaaggaaaaaataccacacgattatcatattca
atgttgaagaagactccaacaaaatccaacactccttgatgataaattct
taaagaaatgagggatacatgtcacatgcttgaacataataaagccaata
cattgaaagctgacttccaatatcaaattaaatggagagaaaaaatattc
cctaaaaagcaataatatggtaaaagtatatattctctgtatctattctg
tatagcacctgaagtttgaacaacaacaataaggaaaggaagaagatcaa
ggtatacaaattgaaaaggaaaaagtcaaactattgctattcagatacag
tagtatacataagtgacatgatgcaaaattaactgaaaataaacagtaga
cttcctataaacagtcagtctctcttcctattgatgccagataaggccat
cctctgctacatgtgcagctggagccatgggtccctccatgtgttttctt
tggttggagctttagttcctgggagctatgaggagtctggttggttgata
ttgttgttttttctatgatattgcaaacctcttcagctccttctgtcctt
cccctaacttctacattggggtcccaaagctcattctgatggttgactgc
aagcatccacatctgtatcagtaaggatttgggcaaagcctctcaggaaa
catctatatcaggctcctctcagcaagcatttgttggcatcagcaatagt
gcctgggcttggtggctgcatatgggattatatccccatgttggggcagt
ctctggatgtctttttccttcagtctctgtccactctttgtccctgtatt
tccctttcaacatgaacaatttctgggtcaaaatttttgaaaattgttag
tggac
gaattccagaaatatcaaataaccctattgaaaatggggtacagagctaa
acaaattctcaaatgaggaatacagaatgtaagagaaacaaaaagatgtt
caacatccttaatcatcagggagatacaaatcaaaacaaccctgagattc
cacctcacaccagtcagaatggctgagatcaaaaattcaggtgacagtag
atgctggcggggatgtggagaaagaggaacactcctccattattggtgag
atttcaagctggtacaaccactctggaaatcagtctcgtggttcctcaga
aaattggacatagtactacaggaagatccagcaatacctctcctgggcat
atacccagaagatgatccaacttgtaataaggacacacactccactatgt
tcatagcagcctaatttataatagccagaagctggaatctttcacctccc
aggtctctggttcattctagggcatttttgaaacatcctatttcctgagt
ttgcctatttccattctttctgctggccctcaagacttcagtcttttttc
ccttatccaataccagatcagaatccatcccccactctacccctttccac
tttccctcccatgttctttcttccctcacaacttgtggttgctttcttct
ccctcccaattgggactgaggcgtcttcacttgggaacttcagcttgttg
agctcttttagttctgtggactgtatcctgtgtattctgtattttttttt
ttgttgtttgtttggtttggtttggggtttttggctactatccatttgtt
agtgtatacataccatgaatgttctttgtgtctgagttacctcaataacc
atggtatttttccagttccatctgtttgcctataaagctcagatgtcctc
attgtttttgttgttgttgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_122841862_122842864
seq2: B6Ng01-104P22.b_46_1050

seq1  GAATTCAAAGATATATAAAAAATATCATGCCTATGATGAAGTAGACTTCA  50
      |||||||||||||||| ||||||||||  || | ||||||||||| ||||
seq2  GAATTCAAAGATATAT-AAAAATATCACCCCAAAGATGAAGTAGAGTTCA  49

seq1  TTTTACATATGCAGGGATGGATCAACATACAAAACTCTTTCACTGTAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACATATGCAGGGATGGATCAACATACAAAACTCTTTCACTGTAATC  99

seq1  TACCATGTAAGCAAACTAAAAGGAAAAAAATACCACAAGATTATCATATT  150
      ||||||||||||||||||||||| ||||||||||||| ||||||||||||
seq2  TACCATGTAAGCAAACTAAAAGG-AAAAAATACCACACGATTATCATATT  148

seq1  TAATGTTGAAGAAGACTCCAACAAAATCCAACACTCCTTGGTGACAAATT  200
       ||||||||||||||||||||||||||||||||||||||| ||| |||||
seq2  CAATGTTGAAGAAGACTCCAACAAAATCCAACACTCCTTGATGATAAATT  198

seq1  CTTAAAGAGATGAGGGATACATGTCACATGCTTGAACATAATAAAGCCAA  250
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGAAATGAGGGATACATGTCACATGCTTGAACATAATAAAGCCAA  248

seq1  TACATTGAAAGCTGACATCCAATATCAAATTAAATGGAGAGAAAAGAAAA  300
      |||||||||||||||| ||||||||||||||||||||||||||   ||||
seq2  TACATTGAAAGCTGACTTCCAATATCAAATTAAATGGAGAGAA---AAAA  295

seq1  TATTCCCTAAAAAGC---AATATGGTAAAAGTATATATTCCCTGTATCTA  347
      |||||||||||||||   |||||||||||||||||||||| |||||||||
seq2  TATTCCCTAAAAAGCAATAATATGGTAAAAGTATATATTCTCTGTATCTA  345

seq1  TTCTGTATAGGACCTGAAGTTTTAGCAACAACGATAAGGAAAGGAAGAAG  397
      |||||||||| ||||||||||| | ||||||| |||||||||||||||||
seq2  TTCTGTATAGCACCTGAAGTTTGAACAACAACAATAAGGAAAGGAAGAAG  395

seq1  ATCAAGGTATACAAATTGAAAAGGAAAAAGTCAAACTATTTCTATTCAGA  447
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATCAAGGTATACAAATTGAAAAGGAAAAAGTCAAACTATTGCTATTCAGA  445

seq1  TACAGTAGTATACATAAGTGACATGATGCAAAATTAACTGAAAATAAACA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTAGTATACATAAGTGACATGATGCAAAATTAACTGAAAATAAACA  495

seq1  GTAGACTTCCTATAAA----CAGTCTCCCTTCCTATTGATTCCAGATAAG  543
      ||||||||||||||||    ||||||| |||||||||||| |||||||||
seq2  GTAGACTTCCTATAAACAGTCAGTCTCTCTTCCTATTGATGCCAGATAAG  545

seq1  GCCATCCTCTGCTACATGTGTAGCTGGAGCCATGGGTCCCTCCATGTGTT  593
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GCCATCCTCTGCTACATGTGCAGCTGGAGCCATGGGTCCCTCCATGTGTT  595

seq1  TTCTTTGGTTGGAGCTTTAGTTCCTGGGAGCTCTGATGAGTCTGGTTGTT  643
      |||||||||||||||||||||||||||||||| ||| ||||||||||| |
seq2  TTCTTTGGTTGGAGCTTTAGTTCCTGGGAGCTATGAGGAGTCTGGTTGGT  645

seq1  TGATATTGTTGTTTTTCCTATGATATTGCAAACCTCTTCAGCTCCTTCAG  693
      |||||||||||||||| ||||||||||||||||||||||||||||||| |
seq2  TGATATTGTTGTTTTTTCTATGATATTGCAAACCTCTTCAGCTCCTTCTG  695

seq1  TCCTTCCCCTAACTTCTACATTGGGGTCCCAAAGCTCATTCTGATGGTTG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCCCTAACTTCTACATTGGGGTCCCAAAGCTCATTCTGATGGTTG  745

seq1  ACTGCAAGCATCCACATCTGTATCAGTAAGGATTT-GGCAAAGCCTCTCA  792
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACTGCAAGCATCCACATCTGTATCAGTAAGGATTTGGGCAAAGCCTCTCA  795

seq1  GGAAACATCTATATCAGGCTCCTCTCAGCAAGCATTTGTTGGCATCAGCA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACATCTATATCAGGCTCCTCTCAGCAAGCATTTGTTGGCATCAGCA  845

seq1  ATAGTGCCTGGCCTTGGTGGCTCCATATGGGA-TATATCCCCATG-TGGG  890
      ||||||||||| |||||||||| ||||||||| |||||||||||| ||||
seq2  ATAGTGCCTGGGCTTGGTGGCTGCATATGGGATTATATCCCCATGTTGGG  895

seq1  GCAGTCTCTGGA-CTCTGGACGGCTTTTCCTTCAGTCTCTGCTCCACTCT  939
      ||||||||||||  |||       ||||||||||||||||| ||||||||
seq2  GCAGTCTCTGGATGTCT-------TTTTCCTTCAGTCTCTG-TCCACTCT  937

seq1  TTGTCCCTGTATTTCC--TTTAACATGAACAA-TTCTGGATCAATATTTT  986
      ||||||||||||||||  || ||||||||||| |||||| |||| |||||
seq2  TTGTCCCTGTATTTCCCTTTCAACATGAACAATTTCTGGGTCAAAATTTT  987

seq1  TGAAAA-TGGTAGTGGAC  1003
      |||||| || ||||||||
seq2  TGAAAATTGTTAGTGGAC  1005

seq1: chr2_101657638_101657691
seq2: B6Ng01-104P22.g_809_987 (reverse)

seq1  --------------------------------------------------  0
                                                        
seq2  CAACAACAACAACAAAAACAATGAGGACATCTGAGCTTTATAGGCAAACA  50

seq1  --------------------------------------------------  0
                                                        
seq2  GATGGAACTGGAAAAATACCATGGTTATTGAGGTAACTCAGACACAAAGA  100

seq1  ---------------CAACAACAACAA------------CAAAAACCCAA  23
                       |||  |||||            ||||||||| |
seq2  ACATTCATGGTATGTATACACTAACAAATGGATAGTAGCCAAAAACCCCA  150

seq1  AAAAACAACCAAACAAACAAACAAAAAAAAA  54
      ||  | |||||||||||| ||||||||||||
seq2  AACCA-AACCAAACAAAC-AACAAAAAAAAA  179