BAC Information

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BAC

Clone NameB6Ng01-106I03
ChromosomeX (Build37)
Map Location 109,815,431 - 109,816,143
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100038989, Tex16, LOC622570, 4933403O08Rik, EG385407, Apool, Satl1, EG623341, 2010106E10Rik, Zfp711, Pof1b
Downstream geneLOC623412, EG623428, LOC100039112, Chm, EG664918, Dach2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106I03.bB6Ng01-106I03.g
ACCDH914227DH914228
length7131,200
definitionDH914227|Mus musculus domesticus DNA, BAC clone: B6Ng01-106I03, 5' end.DH914228|Mus musculus domesticus DNA, BAC clone: B6Ng01-106I03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgattatattttcagcagtcttttttctctgtaatatagatat
tttatatttggcaccaaaaaaactaatttagaatgtttgatttgggggaa
tagaacagatattcccttagacggtaatttaattgcaatagagctaaaaa
ttttattcactgttcctagctataaaaacaattcatttatcaagaatgta
actgaaggagttgggctgatggctcagcagttcacagcacttgctgttcc
tgcggtagactgggttcaattcccagcacctacatggtggctcacagcca
tcagtaactgaagtacagggtaattgatgctgtcctctatcctctgagga
caccagccatgcacatgtacacatccatacatttaggcaaaatattcaga
cacactaaataaaatggtttaaatctcaaaaaagagaaaaaatgttcaaa
attcaagagagtatgggtaaaaaatagaaaacaaaactccaatattaatg
ataagcataaggatcgaaacatcagctaaatacattaaaaacaataaaaa
taatttccattttagatgagctgttttgagggtcattttaaaagtactca
attgctctacaaaggatttgggataaacaaactcagaaaactcagaatat
tttatggtctcaaaacacttttgtcactactggtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtg
gaattcattggttataggttcttttaaagctatatgttctaaaatttctt
cagtcagtttcctaagcagcaaagaaaagaaaggtgaagggaagagtgaa
tgaagagagggaagggggatagaaagaacaaagtagagggaagaaagtat
ttagtactaagcagtaggtgttttacatacacgttgttgtaagtactcac
aataaattcaacacagagaattttattcctttatttggagaaaaaaggaa
cacggttgtggaagttgatttaactttcccaaagcacttacgtatactaa
ttggcttagttttccagaaagtgtaagatctttataagaacttcaagtct
ctgaagaaagaaattgaagatctcctaagatggaaagatctcccatgctc
atggataggcaggattaatatagtcaaaatggctatcttgccgaaagcat
tctacagattcaattctacagattcaatgcccatcaaaattccaactcaa
ttcttcgtagagttagaaagagcaatttgaaaatttatttgaaataacca
aaaaacccaggattgtgaaaactattctcaacaataagagaacttctggg
ggagtcaccattcctgacctcaagctgtactacagagcaattgtgataaa
aactgcatggtactggtacagtgacagacaggtagatcaagggaatagaa
ttgaagatctagaaatgaacccatacacctatggtcacttgatctttgac
aaagtagctaaaatcatccagtaggaaaaagacagtattttcaacaaatg
gtgccagctcaactgggcagttagcaggtagaagaattcaaaatcaatcc
atttttatcttcttataaaaagctcaagtccattggatcaaggacctcca
cataaaacagagacactggaacttaatagaggaagaaggggggaggggct
caaagatatgggcacaggctgaaatttcctgaatagacgcatggcttttg
cttaagatcaagaattgacaatgggactcttaaatgtcaataagacaaaa
aggcaaccagagattgggaagagattctaccagcctaaatcctatagatg
gctagtatccgttataacaataactcaagaagttgatctcgaaacgatac
cttttaatgggtacgagactaaaacaaagaaattcccacctggaggatac

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_109815431_109816143
seq2: B6Ng01-106I03.b_48_760

seq1  GAATTCTTGATTATATTTTCAGCAGTCTTTTTTCTCTGTAATATAGATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGATTATATTTTCAGCAGTCTTTTTTCTCTGTAATATAGATAT  50

seq1  TTTATATTTGGCACCAAAAAAACTAATTTAGAATGTTTGATTTGGGGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATTTGGCACCAAAAAAACTAATTTAGAATGTTTGATTTGGGGGAA  100

seq1  TAGAACAGATATTCCCTTAGACGGTAATTTAATTGCAATAGAGCTAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACAGATATTCCCTTAGACGGTAATTTAATTGCAATAGAGCTAAAAA  150

seq1  TTTTATTCACTGTTCCTAGCTATAAAAACAATTCATTTATCAAGAATGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTCACTGTTCCTAGCTATAAAAACAATTCATTTATCAAGAATGTA  200

seq1  ACTGAAGGAGTTGGGCTGATGGCTCAGCAGTTCACAGCACTTGCTGTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGGAGTTGGGCTGATGGCTCAGCAGTTCACAGCACTTGCTGTTCC  250

seq1  TGCGGTAGACTGGGTTCAATTCCCAGCACCTACATGGTGGCTCACAGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGTAGACTGGGTTCAATTCCCAGCACCTACATGGTGGCTCACAGCCA  300

seq1  TCAGTAACTGAAGTACAGGGTAATTGATGCTGTCCTCTATCCTCTGAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAACTGAAGTACAGGGTAATTGATGCTGTCCTCTATCCTCTGAGGA  350

seq1  CACCAGCCATGCACATGTACACATCCATACATTTAGGCAAAATATTCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGCCATGCACATGTACACATCCATACATTTAGGCAAAATATTCAGA  400

seq1  CACACTAAATAAAATGGTTTAAATCTCAAAAAAGAGAAAAAATGTTCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTAAATAAAATGGTTTAAATCTCAAAAAAGAGAAAAAATGTTCAAA  450

seq1  ATTCAAGAGAGTATGGGTAAAAAATAGAAAACAAAACTCCAATATTAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGAGAGTATGGGTAAAAAATAGAAAACAAAACTCCAATATTAATG  500

seq1  ATAAGCATAAGGATCGAAACATCAGCTAAATACATTAAAAACAATAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCATAAGGATCGAAACATCAGCTAAATACATTAAAAACAATAAAAA  550

seq1  TAATTTCCATTTTAGATGAGCTGTTTTGAGGGTCATTTTAAAAGTACTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCCATTTTAGATGAGCTGTTTTGAGGGTCATTTTAAAAGTACTCA  600

seq1  ATTGCTCTACAAAGGATTTGGGATAAACAAACTCAGAAAACTCAGAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTCTACAAAGGATTTGGGATAAACAAACTCAGAAAACTCAGAATAT  650

seq1  TTTATGGTCTCAAAACACTTTTGTCACTACTGGTGTGTGTGTGTGTGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGTCTCAAAACACTTTTGTCACTACTGGTGTGTGTGTGTGTGTGT  700

seq1  GTGTGTGTGTGTG  713
      |||||||||||||
seq2  GTGTGTGTGTGTG  713