BAC Information

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BAC

Clone NameB6Ng01-107A21
ChromosomeX (Build37)
Map Location 28,868,020 - 28,982,770
singlet/doubletdoublet
Overlap geneLOC664964, LOC100042087, LOC100039171
Upstream geneLOC100039324, LOC100039334, LOC100039096, EG664923, LOC100039364, LOC100039377, LOC100039386, LOC100039127, EG664944, LOC100039423, LOC100039145, LOC664951, LOC100042071, LOC664958
Downstream geneLOC100042103, LOC100042109, LOC100042115, LOC100042122, LOC100042135, LOC100042144, LOC664982, LOC100039212, EG664989, LOC664996, LOC100039467
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107A21.bB6Ng01-107A21.g
ACCDH914627DH914628
length2941,133
definitionDH914627|Mus musculus domesticus DNA, BAC clone: B6Ng01-107A21, 5' end.DH914628|Mus musculus domesticus DNA, BAC clone: B6Ng01-107A21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,868,020 - 28,868,313)(28,981,638 - 28,982,770)
sequence
gaattctctcttgctcttcagttagggttaggctgcagcatctgctgaaa
atcatcccaagtaggctgatgagagaacataagggactccaccaacactg
tgaggcattggggatcctctgagaagagggggtggttagtttctcagtta
taaaggtcaacagaggaaaatgaacagtactgaaggggtttaaggttggg
tgggtccacttgagtccattcggattctgcactttccagctcagtgtact
cggagcaggtacgtagacctggacacttgggtggggggggttgg
gaattcagcagtttctccagaagcagtacagatcatagtcatcaccatga
tctccatcagaaatattaaaaaatagactctatcttgttactggtgacag
catccagctggtatgaccatgactgaaacctcttatctagtgacagaatg
aaaatggacataaaaaagtttataaatggcagaacacttatcatgaatgt
ggcagaattatacataattgacatcagtaattattctaattcagtacaag
actgtcatattaatttggtccaataatgctgcagggatcactgacatgat
tgctgctaaaggcctaaagtatcatggccatacattgtctcttgccagta
tatatgtgacctcaacaaaacatatctcagaacatttaactcaacatgac
ctgagggaacagtactgactgtgaagttcactgtaaattctgatggtttc
tgggatccttgacattaacaatatcttcagaagcaacatgaaatgtgggt
ttcaatatgctactgatggcagcatggataattgtgattgtcataatttc
tggagacactttggagagtcaggttctaatgagaaagattaatgtagaag
gaatagggaagaaggtaagataaactaagaatatctgcaaaagtcataaa
aatctcactactaacttcataaaatcctatacctcacataagctataagt
aaatgagcatgcacagtttaattagaactttacagtttcaatttacttat
taaaccaatgtatgcaattgtttatgtatcttttatttcaaattatataa
cattttctatttatatatgttttgcttcaaataataaaattaggttcata
ttagtgctaaatattacccaaatatgcacgatgctttttgatgtggggat
ttattgatactgtatacatatagctaaaataataacagtagttctcccct
atgtcctatcacaccctgagctattgcttttggtcaattttgcattaatg
agcatggttcctcctcctgtgtagtgagtcttgatctaataagaagcttt
attttctattgacttaaggttacttattttcttatttctgaggtcagggt
gttttaggttcacttcctgtgttttatccttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_28868020_28868313
seq2: B6Ng01-107A21.b_43_336

seq1  GAATTCTCTCTTGCTCTTCAGTTAGGGTTAGGCTGCAGCATCTGCTGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTTGCTCTTCAGTTAGGGTTAGGCTGCAGCATCTGCTGAAA  50

seq1  ATCATCCCAAGTAGGCTGATGAGAGAACATAAGGGACTCCACCAACACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCCCAAGTAGGCTGATGAGAGAACATAAGGGACTCCACCAACACTG  100

seq1  TGAGGCATTGGGGATCCTCTGAGAAGAGGGGGTGGTTAGTTTCTCAGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCATTGGGGATCCTCTGAGAAGAGGGGGTGGTTAGTTTCTCAGTTA  150

seq1  TAAAGGTCAACAGAGGAAAATGAACAGTACTGAAGGGGTTTAAGGTTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTCAACAGAGGAAAATGAACAGTACTGAAGGGGTTTAAGGTTGGG  200

seq1  TGGGTCCACTTGAGTCCATTCGGATTCTGCACTTTCCAGCTCAGTGTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCCACTTGAGTCCATTCGGATTCTGCACTTTCCAGCTCAGTGTACT  250

seq1  CGGAGCAGGTACGTAGACCTGGACACTTGGGTGGGGGGGGTTGG  294
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGCAGGTACGTAGACCTGGACACTTGGGTGGGGGGGGTTGG  294

seq1: chrX_28981638_28982770
seq2: B6Ng01-107A21.g_65_1197 (reverse)

seq1  GTAAGGATAAA--ACAGGGAGTGGAACCT-AAACACCCTTGACCTCAG-A  46
      |||||||||||  ||||| ||| |||||| |||||||| ||||||||| |
seq2  GTAAGGATAAAACACAGGAAGT-GAACCTAAAACACCC-TGACCTCAGAA  48

seq1  ATAAGAAAATTAAGTAA-CTTTAGTCAATAG-ATATTAAGCTTCTTATTA  94
      ||||||||| ||||||| ||| ||||||||| | || |||||||||||||
seq2  ATAAGAAAA-TAAGTAACCTTAAGTCAATAGAAAATAAAGCTTCTTATTA  97

seq1  GATTCAAGACTCACTACACAGGA-GAGGAACCATGCTCATTAATGCAAAA  143
      || |||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GA-TCAAGACTCACTACACAGGAGGAGGAACCATGCTCATTAATGCAAAA  146

seq1  TTGACCAAAAAGCAATAGCTCAGGGTGTGATAGGACATAGGGGAGAACCT  193
      |||||| |||||||||||||||||||||||||||||||||||||||| ||
seq2  TTGACC-AAAAGCAATAGCTCAGGGTGTGATAGGACATAGGGGAGAA-CT  194

seq1  ACTGTTATTATTTTTAGCTATATGTATACAGTATCAATAAATCCCCACAT  243
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTATTA-TTTTAGCTATATGTATACAGTATCAATAAATCCCCACAT  243

seq1  CAAAAAGCATCGTGCATATTTGGGTAATATTTAGCACTAATATGAACCTA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGCATCGTGCATATTTGGGTAATATTTAGCACTAATATGAACCTA  293

seq1  ATTTTATTATTTGAAGCAAAACATATATAAATAGAAAATGTTATATAATT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTATTTGAAGCAAAACATATATAAATAGAAAATGTTATATAATT  343

seq1  TGAAATAAAAGATACATAAACAATTGCATACATTGGTTTAATAAGTAAAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAAAAGATACATAAACAATTGCATACATTGGTTTAATAAGTAAAT  393

seq1  TGAAACTGTAAAGTTCTAATTAAACTGTGCATGCTCATTTACTTATAGCT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTGTAAAGTTCTAATTAAACTGTGCATGCTCATTTACTTATAGCT  443

seq1  TATGTGAGGTATAGGATTTTATGAAGTTAGTAGTGAGATTTTTATGACTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGAGGTATAGGATTTTATGAAGTTAGTAGTGAGATTTTTATGACTT  493

seq1  TTGCAGATATTCTTAGTTTATCTTACCTTCTTCCCTATTCCTTCTACATT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGATATTCTTAGTTTATCTTACCTTCTTCCCTATTCCTTCTACATT  543

seq1  AATCTTTCTCATTAGAACCTGACTCTCCAAAGTGTCTCCAGAAATTATGA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTCTCATTAGAACCTGACTCTCCAAAGTGTCTCCAGAAATTATGA  593

seq1  CAATCACAATTATCCATGCTGCCATCAGTAGCATATTGAAACCCACATTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCACAATTATCCATGCTGCCATCAGTAGCATATTGAAACCCACATTT  643

seq1  CATGTTGCTTCTGAAGATATTGTTAATGTCAAGGATCCCAGAAACCATCA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGCTTCTGAAGATATTGTTAATGTCAAGGATCCCAGAAACCATCA  693

seq1  GAATTTACAGTGAACTTCACAGTCAGTACTGTTCCCTCAGGTCATGTTGA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTACAGTGAACTTCACAGTCAGTACTGTTCCCTCAGGTCATGTTGA  743

seq1  GTTAAATGTTCTGAGATATGTTTTGTTGAGGTCACATATATACTGGCAAG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATGTTCTGAGATATGTTTTGTTGAGGTCACATATATACTGGCAAG  793

seq1  AGACAATGTATGGCCATGATACTTTAGGCCTTTAGCAGCAATCATGTCAG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATGTATGGCCATGATACTTTAGGCCTTTAGCAGCAATCATGTCAG  843

seq1  TGATCCCTGCAGCATTATTGGACCAAATTAATATGACAGTCTTGTACTGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCCTGCAGCATTATTGGACCAAATTAATATGACAGTCTTGTACTGA  893

seq1  ATTAGAATAATTACTGATGTCAATTATGTATAATTCTGCCACATTCATGA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAATAATTACTGATGTCAATTATGTATAATTCTGCCACATTCATGA  943

seq1  TAAGTGTTCTGCCATTTATAAACTTTTTTATGTCCATTTTCATTCTGTCA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTTCTGCCATTTATAAACTTTTTTATGTCCATTTTCATTCTGTCA  993

seq1  CTAGATAAGAGGTTTCAGTCATGGTCATACCAGCTGGATGCTGTCACCAG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATAAGAGGTTTCAGTCATGGTCATACCAGCTGGATGCTGTCACCAG  1043

seq1  TAACAAGATAGAGTCTATTTTTTAATATTTCTGATGGAGATCATGGTGAT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAGATAGAGTCTATTTTTTAATATTTCTGATGGAGATCATGGTGAT  1093

seq1  GACTATGATCTGTACTGCTTCTGGAGAAACTGCTGAATTC  1133
      ||||||||||||||||||||||||||||||||||||||||
seq2  GACTATGATCTGTACTGCTTCTGGAGAAACTGCTGAATTC  1133