BAC Information

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BAC

Clone NameB6Ng01-107N07
ChromosomeX (Build37)
Map Location 76,271,172 - 76,272,332
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC628976, Obp1a, EG546335, EG628991, LOC236874, EG667658, 4930480E11Rik, EG667672, Prrg1, LOC667679, LOC667684, 4921509A18Rik, LOC667700, EG546337
Downstream geneEG629116, LOC636082, EG667736, LOC100041373, EG636104, 2410003J06Rik, LOC667749, LOC211702, LOC667755
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107N07.bB6Ng01-107N07.g
ACCDH915180DH915181
length1,2591,146
definitionDH915180|Mus musculus domesticus DNA, BAC clone: B6Ng01-107N07, 5' end.DH915181|Mus musculus domesticus DNA, BAC clone: B6Ng01-107N07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatgccgaatggctgagaagcacctgaaaaaatg
ttccgcatccttaatcatcagggaaatgcaaatcaaaagaaccctgagat
tcacttcacatcagtcacaatggctaagatcaaaaattcaggtgacatca
gatgctggggaggatgtggagaaaaagggacactcctccattgttggtgg
gattgcaagcttgtacaaccactatggaaatcagtctggcagtcctcaga
aaattggacagagtactactggaagatccagtgattcctctcctgggcat
atacccagaagatgttccaacttgtaataaggacacatgctccactatgt
tcttagcagccttatttataatagccagaagctggaaacaacccagatgt
ccctcaacagaggaatggatacagaaattgtggtatatttatacaatgga
gtactactcagcaattaaaaacaatgaattaatgaaattcctaggcaaat
ggatgcatctggaggatatcatcctgagtgaggtaacccaatcacaaaat
aacaaacatggtatgcactcactgttaagcagatattagcctaaaaactt
agcagatccaagatacaatttgcaaaacactttaaactcaagaagtagga
agaccaaattgtggatacttcgttctttcttagaatggggaacaaagtac
ccttgtcagtccttctttaggcagtgtagggggaagatcataggaagaga
aatttatgagaaatttagagttgctgtataataaaaagtttacttatcta
agtctaagttactatgctattgtagctgacctgcattctgtgatcctctg
aggccagaggctgtagtcacaggcacttagcaccttatcctaaacagagg
gagattaagtaaaaattttgctaggggagattaagtaacagagggagatt
aagtaaaaaaaattgctagatccttttctctattgtcagatgcctcttgc
ttgtcaggctaggggggagtttagagcaataaattctattgaactagaga
gagattacattcacaaacgaaaattttttcatagtgaatatgcacaatct
tcacataatccattacagatcataatgctcatatcatttaaacaccattt
caaagcagtggcatttgcatctttccattcaacttacacattccatcttc
tatgtgtattgaggaaaacagcacttgtggagaaaggagaaccactctat
atctgtgga
gaattctctgtaagaggaaaaatgtgcccttattctgtgcatgagctgga
tgtgttaaacacaatcctttgggcaaaatcgcctgaaacctcctcctaat
ttgtcatctagacatttccctatgtattaaaatcacttcacttgctctaa
gagctgtaacctactcctgtttcccctgaggatgagccaggtcagggaga
aataagctgggctagtaacaagaggtagaaacaagatcctgatccagcat
gggctggaccacactttcaggctgcaatggctgtttatcactcatcactg
tgtatatttttgttccattttcattgtccaaataatggcatccttctaaa
agccacttctcttttgctctgtgatgttgaagagctgctgtgtcgtaaca
tgggtcttaagtcatttgaaaggtggagaataccggtgttatcacataat
aaaggaaacatattaaatttttaaaatgctattataaatgagtgtgtcac
cttttgcagtgctacccaaatggagattgagtataaatggccttcagttc
agtatgtaaataattcattatgcaggcaatgagattgacaattttatatg
gggagttcctttttcctttatctagaaagtttttcatgacagataaaaat
caatcatctggtcaaatttcttgattttgatatgacatagtggtaatgca
ttttccctttttacaagataaatatgaatttctgttgcatgtgttttatt
gttgggataaaacaatcgaggccctgtcccagagtgtgaagcaccttacc
agatgcccttagaaatacagtactatggtgttctcagtccttccctacca
caatttctgtcttctgcaccaatattttgaattttaattttaacatttct
aggacaagattttttggccatataaaagaatgactgttatgaggtagaga
agctcaagtgtattgatgaataaatggatgcataaaatttgtcatatgca
tatagaggccatcatttaatctttaatctgaggaattctgaccactacta
tatatggatgactcctgaagactatctatttaataaaggataattctagt
gattcatctaaaaatatatcttaagcccaaaatccagaatcaataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_76271172_76272332
seq2: B6Ng01-107N07.g_70_1215

seq1  GAATTCTCTGTAAGAGGAAAAATGTGCCCTTATTCTGTGCATGAGCTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTAAGAGGAAAAATGTGCCCTTATTCTGTGCATGAGCTGGA  50

seq1  TGTGTTAAACACAATCCTTTGGGCAAAATCGCCTGAAACCTCCTCCTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTAAACACAATCCTTTGGGCAAAATCGCCTGAAACCTCCTCCTAAT  100

seq1  TTGTCATCTAGACATTTCCCTATGTATTAAAATCACTTCACTTGCTCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATCTAGACATTTCCCTATGTATTAAAATCACTTCACTTGCTCTAA  150

seq1  GAGCTGTAACCTACTCCTGTTTCCCCTGAGGATGAGCCAGGTCAGGGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGTAACCTACTCCTGTTTCCCCTGAGGATGAGCCAGGTCAGGGAGA  200

seq1  AATAAGCTGGGCTAGTAACAAGAGGTAGAAACAAGATCCTGATCCAGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGCTGGGCTAGTAACAAGAGGTAGAAACAAGATCCTGATCCAGCAT  250

seq1  GGGCTGGACCACACTTTCAGGCTGCAATGGCTGTTTATCACTCATCACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGACCACACTTTCAGGCTGCAATGGCTGTTTATCACTCATCACTG  300

seq1  TGTATATTTTTGTTCCATTTTCATTGTCCAAATAATGGCATCCTTCTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATTTTTGTTCCATTTTCATTGTCCAAATAATGGCATCCTTCTAAA  350

seq1  AGCCACTTCTCTTTTGCTCTGTGATGTTGAAGAGCTGCTGTGTCGTAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACTTCTCTTTTGCTCTGTGATGTTGAAGAGCTGCTGTGTCGTAACA  400

seq1  TGGGTCTTAAGTCATTTGAAAGGTGGAGAATACCGGTGTTATCACATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTTAAGTCATTTGAAAGGTGGAGAATACCGGTGTTATCACATAAT  450

seq1  AAAGGAAACATATTAAATTTTTAAAATGCTATTATAAATGAGTGTGTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAACATATTAAATTTTTAAAATGCTATTATAAATGAGTGTGTCAC  500

seq1  CTTTTGCAGTGCTACCCAAATGGAGATTGAGTATAAATGGCCTTCAGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCAGTGCTACCCAAATGGAGATTGAGTATAAATGGCCTTCAGTTC  550

seq1  AGTATGTAAATAATTCATTATGCAGGCAATGAGATTGACAATTTTATATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTAAATAATTCATTATGCAGGCAATGAGATTGACAATTTTATATG  600

seq1  GGGAGTTCCTTTTTCCTTTATCTAGAAAGTTTTTCATGACAGATAAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTTCCTTTTTCCTTTATCTAGAAAGTTTTTCATGACAGATAAAAAT  650

seq1  CAATCATCTGGTCAAATTTCTTGATTTTGATATGACATAGTGGTAATGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATCTGGTCAAATTTCTTGATTTTGATATGACATAGTGGTAATGCA  700

seq1  TTTTCCCTTTTTACAAGATAAATATGAATTTCTGTTGCATGTGTTTTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCTTTTTACAAGATAAATATGAATTTCTGTTGCATGTGTTTTATT  750

seq1  GTTGGGATAAAACAATCGAGGCCCTGTCCCAGAGTGTGAAGCACCTTACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGATAAAACAATCGAGGCCCTGTCCCAGAGTGTGAAGCACCTTACC  800

seq1  AGATGCCCTTAGAAATACAGTACTATGGTGTTCTCAGTCCTTCCCTACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCCCTTAGAAATACAGTACTATGGTGTTCTCAGTCCTTCCCTACCA  850

seq1  CAA-TTCTGTCTTCTGCACCAATATTTTGAAATTTTAATTTTAACATTTC  899
      ||| ||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CAATTTCTGTCTTCTGCACCAATATTTTG-AATTTTAATTTTAACATTTC  899

seq1  TAGGACAAGA-TTTTTGGCCATTATAAAAGAATGACTGTTATGAGGTAGA  948
      |||||||||| |||||||||| ||||||||||||||||||||||||||||
seq2  TAGGACAAGATTTTTTGGCCA-TATAAAAGAATGACTGTTATGAGGTAGA  948

seq1  GAAGCTCAAGTGTAATTGATGAATAAATGGATGCATAAAATTTGTCATAT  998
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAAGCTCAAGTGT-ATTGATGAATAAATGGATGCATAAAATTTGTCATAT  997

seq1  GCATATAGAGGCCATCATTTAATCTTTAATCTGAAGGAAATTCTGAACAC  1048
      ||||||||||||||||||||||||||||||||||  | |||||||| |||
seq2  GCATATAGAGGCCATCATTTAATCTTTAATCTGA--GGAATTCTGACCAC  1045

seq1  ATACTATAATATGGATGAACTCTGAAGACATTATCTATTTAATAAAAGGA  1098
       |||||| ||||||||||   ||||||||  |||||||||||| ||||||
seq2  -TACTAT-ATATGGATGACTCCTGAAGAC--TATCTATTTAAT-AAAGGA  1090

seq1  TAATTCTAGTGATTCCATCTATAAAATATATCTAAAGCCCATAAATTCAC  1148
      |||||||||||||| |||||| ||||||||||| ||||||| ||||   |
seq2  TAATTCTAGTGATT-CATCTA-AAAATATATCTTAAGCCCA-AAAT--CC  1135

seq1  AGAATCCAAATAA  1161
      ||||||  |||||
seq2  AGAATC--AATAA  1146