BAC Information

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BAC

Clone NameB6Ng01-108B11
ChromosomeX (Build37)
Map Location 155,685,804 - 155,687,005
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667487, LOC436243, LOC100040371
Downstream geneRps6ka3, Eif1ay, Mtap7d2, A830080D01Rik, LOC100041359, Sh3kbp1, LOC667524, Pdha1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108B11.bB6Ng01-108B11.g
ACCDH915366DH915367
length1,175843
definitionDH915366|Mus musculus domesticus DNA, BAC clone: B6Ng01-108B11, 5' end.DH915367|Mus musculus domesticus DNA, BAC clone: B6Ng01-108B11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtgtcattctatgaggtggcataattcaacccttaagttgtct
aatgacctataggaacattttttattactatgatttcaaaatacctgttt
tttttaacattttattgggaagggagcccaggaaaacattctaccattga
ccattatcaccagtcatcaacaagctattatattgccctttggaaacagt
aaatactttgtgtttttctaaaaagcatttcataaattttcttgtaaaaa
caaacaatttaaatgtacacaattttattaggttgggttaattacatttt
caaataaaggtacttataaaattcactccttatttagtaagaaattttaa
gttatgttcaggtttttaaaagaatgtttttggtattcatacctcaaaga
tattttttattaccagttatctgtttaaataagttgctgaaatcataatc
aatgtggttacttggtgaacatgtactccattcataaatagcatacttaa
atcaatcaccagattttctagcaacagacctgacctaacactgcttcact
tacacagttttgtgattaaagttgcatatttctgaaacatagatatttgg
gatttggttagtagccacagagtagaattccatttaattccatggtatca
cttctgattgagcactggttatgggatgagttaaaatccaaatctctttt
taaaataaaaagaaaagaaaagcctagagtttttcttaaagttatcttcc
taaatgcaaactcaaatttacattcaaaagaacacaaactttaaaataac
cacaatagcagtcacattttaaaaccatagtttcacaatgtttaggtgtt
tctttttctttgctttgcttttttttttaatttcttttttttttttaaca
gtgatgaatagaaaccagtggtccttggggtttttgcttcaaatggtttg
tgaactggaaaaaaaatgagacactgttctaaccaagcacagtaaatgat
agtttcaaaacagaaatgctggctctgaagaacacttatactgtggattt
tgctaatgttaagcagcgttttaaatatggttgaaatgaaatttgatgta
tatctcctctatgaatatggttatagacagaccttcaggacttttcctgc
tctagtcaaacctgaaggaacagta

gaattccaagtacagaacaatttggagataccagaggggtcaagaacacc
aggagatttaacttaggtacatgctatctgtctaaaagttgttcatttca
tctagattttccagttatgttcagtataggcttttgtagtaaggtctaat
gatttttttgaatttcctcagtttctgttgttatgtctcccttttcattt
ctgattttgttaatttggatactgtctctgagccagttactctggctaag
agtttatctatcttgttgattctttaaagaaccagattttagttttgttg
attctttgtatagttatctttgtttctaattgattgatttctgccctgag
tttgattatttcttgccatctactcctcttgggtgtgtttgatttttttt
tgttgttgttctagagctctcaggtgtgctgttaagttgatagtgtagga
tctcttcagtttctttatcagggcacttagtactatgaattttcctctta
gaaatgctttcattgtgtcccataagtttggatatgctgtgtcttctgaa
tactattcagctattaaaaatgacaacttcatgaattttgcaggcaaatg
gatggaactagataatattatcctgagtgaggtaacccagactccaaagg
acatgcatggtatgtactcactgataagtggatattagccaaaaagtaca
gaatacctaggatatagcccacagaatttaataagtttaacaagcataaa
ggccaaattaggatggttccttccctcttagaagggagaagaaaatgatc
acaggtggcagagggaggtagggtcttgggtgggagaagggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_155685804_155687005
seq2: B6Ng01-108B11.b_48_1222

seq1  GAATTCAGTGTCATTCTATGAGGTGGCATAATTCAACCCTTAAGTTGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTCATTCTATGAGGTGGCATAATTCAACCCTTAAGTTGTCT  50

seq1  AATGACCTATAGGAACATTTTTTATTACTATGATTTCAAAATACCTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACCTATAGGAACATTTTTTATTACTATGATTTCAAAATACCTGTTT  100

seq1  TTTTTAACATTTTATTGGGAAGGGAGCCCAGGAAAACATTCTACCATTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAACATTTTATTGGGAAGGGAGCCCAGGAAAACATTCTACCATTGA  150

seq1  CCATTATCACCAGTCATCAACAAGCTATTATATTGCCCTTTGGAAACAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTATCACCAGTCATCAACAAGCTATTATATTGCCCTTTGGAAACAGT  200

seq1  AAATACTTTGTGTTTTTCTAAAAAGCATTTCATAAATTTTCTTGTAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTTTGTGTTTTTCTAAAAAGCATTTCATAAATTTTCTTGTAAAAA  250

seq1  CAAACAATTTAAATGTACACAATTTTATTAGGTTGGGTTAATTACATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAATTTAAATGTACACAATTTTATTAGGTTGGGTTAATTACATTTT  300

seq1  CAAATAAAGGTACTTATAAAATTCACTCCTTATTTAGTAAGAAATTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAAGGTACTTATAAAATTCACTCCTTATTTAGTAAGAAATTTTAA  350

seq1  GTTATGTTCAGGTTTTTAAAAGAATGTTTTTGGTATTCATACCTCAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTTCAGGTTTTTAAAAGAATGTTTTTGGTATTCATACCTCAAAGA  400

seq1  TATTTTTTATTACCAGTTATCTGTTTAAATAAGTTGCTGAAATCATAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTATTACCAGTTATCTGTTTAAATAAGTTGCTGAAATCATAATC  450

seq1  AATGTGGTTACTTGGTGAACATGTACTCCATTCATAAATAGCATACTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGTTACTTGGTGAACATGTACTCCATTCATAAATAGCATACTTAA  500

seq1  ATCAATCACCAGATTTTCTAGCAACAGACCTGACCTAACACTGCTTCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCACCAGATTTTCTAGCAACAGACCTGACCTAACACTGCTTCACT  550

seq1  TACACAGTTTTGTGATTAAAGTTGCATATTTCTGAAACATAGATATTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGTTTTGTGATTAAAGTTGCATATTTCTGAAACATAGATATTTGG  600

seq1  GATTTGGTTAGTAGCCACAGAGTAGAATTCCATTTAATTCCATGGTATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGGTTAGTAGCCACAGAGTAGAATTCCATTTAATTCCATGGTATCA  650

seq1  CTTCTGATTGAGCACTGGTTATGGGATGAGTTAAAATCCAAATCTCTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGATTGAGCACTGGTTATGGGATGAGTTAAAATCCAAATCTCTTTT  700

seq1  TAAAATAAAAAGAAAAGAAAAGCCTAGAGTTTTTCTTAAAGTTATCTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAAAAGAAAAGAAAAGCCTAGAGTTTTTCTTAAAGTTATCTTCC  750

seq1  TAAATGCAAACTCAAATTTACATTCAAAAGAACACAAACTTTAAAATAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCAAACTCAAATTTACATTCAAAAGAACACAAACTTTAAAATAAC  800

seq1  CACAATAGCAGTCACATTTTAAAACCATAGTTTCACAATGTTTAGGTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATAGCAGTCACATTTTAAAACCATAGTTTCACAATGTTTAGGTGTT  850

seq1  TCTTTTTCTTTGCTTTGCTTTTTTTTTTAATTTCTTTTTTTTTTTTAACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTCTTTGCTTTGCTTTTTTTTTTAATTTCTTTTTTTTTTTTAACA  900

seq1  GTGATGAATAGAAACCAGTGGTCCTTGGGGTTTTTGCTTCAAAATGGTTT  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GTGATGAATAGAAACCAGTGGTCCTTGGGGTTTTTGCTTC-AAATGGTTT  949

seq1  GTGAACTGGAAAAAAAAATGAGAACCACTGTTCTAACCAAGCACAGTAAA  1000
      ||||||||| |||||||||||||  |||||||||||||||||||||||||
seq2  GTGAACTGG-AAAAAAAATGAGA--CACTGTTCTAACCAAGCACAGTAAA  996

seq1  TTGATAGTTTCAAAACAGAAATGCTGGCCTCTGAAGGAACACTTTATACT  1050
       |||||||||||||||||||||||||| ||||||| |||||| |||||||
seq2  -TGATAGTTTCAAAACAGAAATGCTGG-CTCTGAA-GAACAC-TTATACT  1042

seq1  GTGATTTTTGCTTAATGTTAAAGCAGCCGTTTTAAATATTGGTTTGAAAA  1100
      |||  |||||| ||||||| |||||| ||||||||||| |||||   |||
seq2  GTGGATTTTGC-TAATGTT-AAGCAG-CGTTTTAAATA-TGGTT--GAAA  1086

seq1  TGAAATTTGAGTGTATTATCTCCCTCTTATGAATTAGTGTTTATAGACAA  1150
      |||||||||| |||| ||||| |||| |||||||   || |||||||| |
seq2  TGAAATTTGA-TGTA-TATCT-CCTC-TATGAAT--ATGGTTATAGAC-A  1129

seq1  GAACATTTCAAGGAGCTTTTCTGCTCTAGTCAAAAACTGAAGGGGAACAG  1200
      || |  ||| ||||  ||| ||||||||||| ||| |||||  |||||||
seq2  GACC--TTC-AGGACTTTTCCTGCTCTAGTC-AAACCTGAA--GGAACAG  1173

seq1  TA  1202
      ||
seq2  TA  1175


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