BAC Information

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BAC

Clone NameB6Ng01-108O24
ChromosomeX (Build37)
Map Location 46,678,738 - 46,679,923
singlet/doubletsinglet
Overlap genenone
Upstream geneBcorl1, Elf4, Aifm1, Rab33a, Suhw3, Slc25a14, Gpr119, Rbmx2, LOC665752, Gm595, EG637758, LOC100040295, Enox2
Downstream gene1100001E04Rik, LOC100041697, Olfr1320, Olfr1321, Igsf1, Olfr1322, LOC100040344, Olfr1323, EG665816
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108O24.bB6Ng01-108O24.g
ACCDH915989DH915990
length9431,193
definitionDH915989|Mus musculus domesticus DNA, BAC clone: B6Ng01-108O24, 5' end.DH915990|Mus musculus domesticus DNA, BAC clone: B6Ng01-108O24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatatgcttcctttatgttcatgggcatctctttctttaggtta
gagaaggattcttctataattttgttcaagatatttactggccctttgac
ttgggaatcttcactcttttctatacccaatagccttaggtttggtcttc
tcattgtgtcatgaatttcctggatattttgagtaaggatctttttgcat
tttgcattttctttgattgttgtgtcaatgttttctatggaatcttctac
acctgagattctttcttctatctcttatattctgttggtaatgcttgcat
atatggctgttgatctctttcctgggatttatgtcttctgagttgtctcc
ctttatgatttctttattgtttctacttccatttttagatcctgaatggt
tttcttcaattcattcacctgtttcgatgtgttctcctctgattctctaa
ggaatttttgtgtctcctctttaagggcttttacctgtttgcctgtgttc
tcctgtaattctttaaggaactttttggttttcctctttaagggcttcta
cctgtttacctgtgtccctctgtatttctttaagggagttatttatgtcc
tttttaaagtcctccatcatcagcatgagaagtgactttagataactaaa
gtgactttatcttgctttttctggtgtgatagtgtatccaggacttgcta
tggtagaaaaaaaatggcttttgataatgccaagtaacctcagtttctgt
tgcttctattcgtaagctagcctcttgccatctgattatctcaagtgttc
cctgccctcgatacatctgattggaacctgtcctcctgtaccctggtgag
tcagagctcctcagagtctatctttctctgtgatctgtgatacaggatct
gtgatcctgagattctggtgtgtcagtgttcttggaatcaacc
gaattcaaagggaacatcctgcttcagcatagaaagatgctgtgtgagtt
ggatagcttataagtctcttctcaggtatacagacagagccatttgtgac
atcttgagacaataaaatagacttcaagccagcttaaggatggttataag
acatatattttgcatgccatggctgatttttcttcctgtctacttctcta
ttgatccagactattaatgatggcaacttttatttttcctacccaacctt
ggttttggttctcagtcatcaagcctcaactgtgattttgatctcaaggc
ttagcgaaaacagtttgcagtttcttccttggtgtgagcaattcaaataa
tctattcccccagagagaaaactgtgaaaccggttaaagttaccaaagaa
aacatttttcaagtctttggggatgaaccaaaattcagggatatctattc
catagcatctaagtcagagatggtacccaccacaaccccaagtggatggg
ctctctcagccaactgaacagctctgcgtgcacagctgcagctaagaaga
cagctgttgtatttccctgatttgagcgatcaattagcatattggaaagg
taatggtcttcattaaaccctcttgatcctatctccatactgcagacact
tcactgatgagtagcaacagtcccaaacatacaacactcaaaccataaaa
aggacccaggtcaagaactagttgaagtgtcccgaaagtgagattattcc
agagagaagtagaaataatgcaaaactgatgtgtaagacttttttggaat
agagactagaggaactcatgtcctggaatgcttttgaatgaacacacaca
caaacacacacatacacaaagtgaacagtatctggatgagaacagcttca
tgatattgatagagacaaatcagctataagtttaaaagatcaggggaaag
acagcttaagagggcctttgctaagttccaacctcacctcaaatgagtag
caggaaatcccatgtcatagaatacatttactcagaaaataaagttactt
tagaaaaacatatagttccttgaaatgaaacagttttcccaattgatctt
gtgaaagagagtgtccagctacacacctcatccaagtaaagatgaatgcc
ttggaagatggatgaaacagttagatctaaacactatactatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_46678738_46679923
seq2: B6Ng01-108O24.g_67_1259

seq1  GAATTCAAAGGGAACATCCTGCTTCAGCATAGAAAGATGCTGTGTGAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGGGAACATCCTGCTTCAGCATAGAAAGATGCTGTGTGAGTT  50

seq1  GGATAGCTTATAAGTCTCTTCTCAGGTATACAGACAGAGCCATTTGTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGCTTATAAGTCTCTTCTCAGGTATACAGACAGAGCCATTTGTGAC  100

seq1  ATCTTGAGACAATAAAATAGACTTCAAGCCAGCTTAAGGATGGTTATAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGAGACAATAAAATAGACTTCAAGCCAGCTTAAGGATGGTTATAAG  150

seq1  ACATATATTTTGCATGCCATGGCTGATTTTTCTTCCTGTCTACTTCTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATTTTGCATGCCATGGCTGATTTTTCTTCCTGTCTACTTCTCTA  200

seq1  TTGATCCAGACTATTAATGATGGCAACTTTTATTTTTCCTACCCAACCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCCAGACTATTAATGATGGCAACTTTTATTTTTCCTACCCAACCTT  250

seq1  GGTTTTGGTTCTCAGTCATCAAGCCTCAACTGTGATTTTGATCTCAAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGGTTCTCAGTCATCAAGCCTCAACTGTGATTTTGATCTCAAGGC  300

seq1  TTAGCGAAAACAGTTTGCAGTTTCTTCCTTGGTGTGAGCAATTCAAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCGAAAACAGTTTGCAGTTTCTTCCTTGGTGTGAGCAATTCAAATAA  350

seq1  TCTATTCCCCCAGAGAGAAAACTGTGAAACCGGTTAAAGTTACCAAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCCCCCAGAGAGAAAACTGTGAAACCGGTTAAAGTTACCAAAGAA  400

seq1  AACATTTTTCAAGTCTTTGGGGATGAACCAAAATTCAGGGATATCTATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTTCAAGTCTTTGGGGATGAACCAAAATTCAGGGATATCTATTC  450

seq1  CATAGCATCTAAGTCAGAGATGGTACCCACCACAACCCCAAGTGGATGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCATCTAAGTCAGAGATGGTACCCACCACAACCCCAAGTGGATGGG  500

seq1  CTCTCTCAGCCAACTGAACAGCTCTGCGTGCACAGCTGCAGCTAAGAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCAGCCAACTGAACAGCTCTGCGTGCACAGCTGCAGCTAAGAAGA  550

seq1  CAGCTGTTGTATTTCCCTGATTTGAGCGATCAATTAGCATATTGGAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTTGTATTTCCCTGATTTGAGCGATCAATTAGCATATTGGAAAGG  600

seq1  TAATGGTCTTCATTAAACCCTCTTGATCCTATCTCCATACTGCAGACACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGTCTTCATTAAACCCTCTTGATCCTATCTCCATACTGCAGACACT  650

seq1  TCACTGATGAGTAGCAACAGTCCCAAACATACAACACTCAAACCATAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGATGAGTAGCAACAGTCCCAAACATACAACACTCAAACCATAAAA  700

seq1  AGGACCCAGGTCAAGAACTAGTTGAAGTGTCCCGAAAGTGAGATTATTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCCAGGTCAAGAACTAGTTGAAGTGTCCCGAAAGTGAGATTATTCC  750

seq1  AGAGAGAAGTAGAAATAATGCAAAACTGATGTGTAAGACTTTTTTGGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAAGTAGAAATAATGCAAAACTGATGTGTAAGACTTTTTTGGAAT  800

seq1  AGAGACTAGAGGAACTCATGTCCTGGAATGCTTTTGAATGAACACACACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTAGAGGAACTCATGTCCTGGAATGCTTTTGAATGAACACACACA  850

seq1  CAAACACACACATACACAAAGTGAACAGTATCTGGATGAGAACAGCTCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CAAACACACACATACACAAAGTGAACAGTATCTGGATGAGAACAGCTTCA  900

seq1  TGATATTGATAGAGACAAATCAGCTATAAGTTTAAAAGATCAGGGGAAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTGATAGAGACAAATCAGCTATAAGTTTAAAAGATCAGGGGAAAG  950

seq1  ACAGCTTAAGAGGG-CTTTGCTAAGTT-CACACTCACCTCAGATGAGTAG  998
      |||||||||||||| |||||||||||| ||  ||||||||| ||||||||
seq2  ACAGCTTAAGAGGGCCTTTGCTAAGTTCCAACCTCACCTCAAATGAGTAG  1000

seq1  CAGG-AATTCCATGTCATAGAATACATTTACTCAG-AAATAAAG-TAC-T  1044
      |||| ||| |||||||||||||||||||||||||| |||||||| ||| |
seq2  CAGGAAATCCCATGTCATAGAATACATTTACTCAGAAAATAAAGTTACTT  1050

seq1  TAG-AAAACATATAGTTCCT--GAATG-AACAGTTT--CCCATTGATC-T  1087
      ||| ||||||||||||||||   |||| ||||||||  || ||||||| |
seq2  TAGAAAAACATATAGTTCCTTGAAATGAAACAGTTTTCCCAATTGATCTT  1100

seq1  GTGAAAG-CAGTGTCCCAGCTACACA-CTCATTCAAAGGTAAGGATGAAT  1135
      |||||||  ||||| ||||||||||| ||||| |||  |||| |||||||
seq2  GTGAAAGAGAGTGT-CCAGCTACACACCTCATCCAA--GTAAAGATGAAT  1147

seq1  GCTTTGAAAGATGGAATTTAGAACCAGTTAGTATCTAACCATCATACTAT  1185
      || ||| ||||||||     ||| ||||||| |||||| ||  |||||||
seq2  GCCTTGGAAGATGGA----TGAAACAGTTAG-ATCTAAACACTATACTAT  1192

seq1  T  1186
      |
seq2  T  1193