MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-109N11
Chromosome	X (Build37)
Map Location	95,017,392 - 95,018,417
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC675824, LOC668234, EG668236, LOC668238, Pgr15l, Eda2r
Downstream gene	LOC668244, Ar, LOC100042324, Ophn1
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC675824 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675824
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC668234 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668234
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG668236 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668236 MGI:3648922
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein pseudo : _no_value

name	LOC668238 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668238
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Pgr15l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245526 MGI:2676330
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eda2r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245527 MGI:2442860
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668244 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668244
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Ar (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11835 MGI:88064
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042324 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042324
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Ophn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94190 MGI:2151070
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pgr15l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802340 GeneID:245526 MGI:2676330
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 15-like transcript_id : NM_001033361.2

name	Eda2r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353600 GeneID:245527 MGI:2442860
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ectodysplasin A2 isoform receptor transcript_id : NM_175540.4

name	Ar (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129906 GeneID:11835 MGI:88064
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : androgen receptor transcript_id : NM_013476.3

name	Ophn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345123 GeneID:94190 MGI:2151070
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oligophrenin 1 transcript_id : NM_052976.3

name	Pgr15l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84781789 CCDS:CCDS30292.1 GeneID:245526 MGI:2676330
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004983 - neuropeptide Y receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : G protein-coupled receptor PGR15L product : G protein-coupled receptor 15-like protein_id : NP_001028533.1

name	Eda2r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982201 CCDS:CCDS30293.1 GeneID:245527 MGI:2442860
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0004872 - receptor activity [Evidence ISS]; GO:0005031 - tumor necrosis factor receptor activity [Evidence ISS] GO_process : GO:0051092 - activation of NF-kappaB transcription factor [Evidence ISS]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0009790 - embryonic development [Evidence ISS]; GO:0008544 - epidermis development [Evidence ISS]; GO:0046330 - positive regulation of JNK cascade [Evidence ISS] codon_start : 1 exception : mismatches in translation product : X linked ectodysplasin receptor protein_id : NP_780749.2

name	Ar (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7304901 CCDS:CCDS30294.1 GeneID:11835 MGI:88064
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] [Evidence IDA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IPI] [Evidence IDA] GO_function : GO:0004882 - androgen receptor activity [Evidence ISS] [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0005496 - steroid binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS] [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030521 - androgen receptor signaling pathway [Evidence IDA]; GO:0016049 - cell growth [Evidence ISS]; GO:0050875 - cellular physiological process [Evidence IDA]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IMP]; GO:0008584 - male gonad development [Evidence IMP]; GO:0019102 - male somatic sex determination [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : testicular feminization product : androgen receptor protein_id : NP_038504.1

name	Ophn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16418475 CCDS:CCDS30295.1 GeneID:94190 MGI:2151070
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IDA]; GO:0005096 - GTPase activator activity [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : oligophrenin 1 protein_id : NP_443208.1

name	LOC675824 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675824
definition	number : 5 pseudo : _no_value

name	LOC675824 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675824
definition	number : 4 pseudo : _no_value

name	LOC675824 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675824
definition	number : 3 pseudo : _no_value

name	LOC675824 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675824
definition	number : 2 pseudo : _no_value

name	LOC675824 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675824
definition	number : 1 pseudo : _no_value

name	LOC668234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668234
definition	number : 5 pseudo : _no_value

name	LOC668234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668234
definition	number : 4 pseudo : _no_value

name	LOC668234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668234
definition	number : 3 pseudo : _no_value

name	LOC668234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668234
definition	number : 2 pseudo : _no_value

name	LOC668234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668234
definition	number : 1 pseudo : _no_value

name	LOC668238 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668238
definition	number : 3 pseudo : _no_value

name	LOC668238 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668238
definition	number : 2 pseudo : _no_value

name	LOC668238 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668238
definition	number : 1 pseudo : _no_value

name	LOC668244 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668244
definition	number : 1 pseudo : _no_value

name	LOC100042324 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042324
definition	number : 2 pseudo : _no_value

name	LOC100042324 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042324
definition	number : 1 pseudo : _no_value

name	EG668236 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149271831 GeneID:668236 MGI:3648922
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein product : predicted gene, EG668236 pseudo : _no_value transcript_id : XR_033838.1

clone name	MSMg01-353K05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-070J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213E20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-291D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345I20
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-109N11.b	B6Ng01-109N11.g
ACC	DH916635	DH916636
length	1,037	1,167
definition	DH916635\|Mus musculus domesticus DNA, BAC clone: B6Ng01-109N11, 5' end.	DH916636\|Mus musculus domesticus DNA, BAC clone: B6Ng01-109N11, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcaatcagactaaagaaaaaacaatctctaaccatggaaagctcat ttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaaattttatttaaca ttttttaatcatagaaaattataaatcaggcagggttttatttctaaact tttcaaagattattataaacccaaatgtagctttcttttaaactggttcc aacttaaatcaaaggcacagcacacaactaaaacactttgatacgaatta ttttaggttctaatatttttacattatttgaaaatttttggagaaacgtt atttagaaattcaaataaccccattaaaaatggggtacagagctaaacaa agaattctcaactgaggaataccaaagggctgagaagcacctgaaaaaat gttcaacatccttagtcatcagggaaatacaaattaaaaaccctgagatt ctacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagcc aaaaaagctcatttttggaaggctgagacccactttgggctctgtgtttt gggccactccaccttttaggctcttccatctgtaatacataattcttgtc tactaagctcatgctagttgtacctgctgatattcttggcaatttatcca acatttctggcctcttcaatgtgatggcatcaccactgtaactaaggcta cacctagaaccaatatttatatgtaggatcttttcaggaattgtgactct ttcatcattctaaacctcagattgtctttatgagccattcaaatcttgag accaactaaatctgagaccactccttcctatgatggcctttttcatggag tccaaattttgctacatgggtgccaactctcggattctcctcagtaacct ttttaatactgtgttattatactgcaatggtttctcctgatttctcattg caaagtcaactgctctccagaattctttcatctctgatctctcatgctac caaaatagtacatgggagacttcttacaatttcagtt	gaattccttaatccacttagatttgaccttagtacaaggagataggaatg gatcaattcgcattcttctacatgataactaccagttgtgccagcaccat ttgttgaaaatgctgtcttttttccactggatggttttagctcccttgtc aaagatcaagtgaccataggcttgtgggttcatttctgggtcttcagttc tactccattggtctatttgtctgtccctatagcagtgccatgcagttttt tatcacaattgatctgtagtacagctttaggtcaggcatggtgattccaa cagatattcttttatccttgagcagagtttttgctatcctaggttttttg ttactccagatgaatttggagattgccctttctaattcattgaagaattg aattggaattttgatggggatttcattgaatctgtagattgcttttggca agatagccatttttactatattgatcctgccaatccatgagcatggaaga tctttccatcttctgagatcttctttaatttctttcttcagagacttgaa gtttttaccatagaggtctttcactaccttagagtcacaccaaggtattt tatattatttgtgtattgagaagggtgttgtttccctaatttctttctca gcctgttcatcctgtgtgtacagaaaggccattgacttttttgagttata ttatatccagctgcttcattgaagctgtttatcacgcttagaagttctct ggtgctatttttagggtcacttatatatactatcacatcatctgcaaaaa gtgataatttgacttcttcttttccaatttttttaaagattttatttatt tattatatgtaagtacactgtagctgttttcaaacacacagagaggagtc agatctcattacgatggttgtgagccaccatgtgttgctgggatttgaac tcaagacctttggaagagcagtcagtgctcatactgctgagcatctcatc ggcctgcctttccaattttattccttgatctcatctgttgttgaattgct tactcagggacttcaagtctatggtgaaatggaggagaaatgtggcagtc ttgtccatacccgagattatatgggaagtgctctccacctcccacattaa cttttatgtgcccactg
quality values	Open. Hide. 61 47 33 38 61 38 18 61 61 47 38 61 61 61 61 61 61 61 61 61 61 59 61 61 23 19 13 19 22 26 26 23 24 24 59 61 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 55 61 61 61 61 59 59 59 55 37 37 44 44 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 55 59 61 61 61 61 59 59 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 59 59 59 59 59 59 59 59 61 59 59 59 61 59 59 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 52 59 59 50 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 61 61 61 61 61 55 61 61 61 52 61 61 61 55 55 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 43 61 61 61 61 47 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 53 50 61 61 61 61 45 47 61 61 61 61 53 50 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 47 61 61 61 53 61 61 61 61 61 61 61 53 53 61 53 61 61 53 61 61 53 61 61 61 61 57 53 52 53 57 53 47 53 47 47 53 57 57 57 57 53 50 53 53 53 52 45 57 57 40 42 38 53 52 57 57 52 52 50 47 33 47 41 47 52 57 52 50 53 57 53 25 57 50 53 53 57 50 40 53 50 57 45 53 52 43 57 57 45 40 53 50 23 27 47 50 52 53 57 32 52 52 52 33 33 53 33 52 28 41 39 52 24 44 43 52 52 35 34 52 39 53 27 57 41 50 24 57 11 17 30 42 47 50 40 40 45 57 36 38 50 42 57 57 50 27 14 23 31 39 17 13 57 52 36 53 38 31 34 42 50 57 36 40 28 40 33 29 38 53 50 42 43 52 47 18 53 34 33 24 20 34 20 41 53 27 52 40 53 36 36 33 29 53 29 18 37 30 34 43 25 14 53 52 33 37 36 41 41 37 35 37 23 35 37 24 23 17 10 57 31 35 37 40 30 40 20 31 24 48 24 40 29 29 57 31 40 29 34 21 37 30 33 31 20 31 46 22 41 30 46 46 46 21 27 19 29 29 30 29 16 27 24 45 5 45 14 43 46 48 28 28 21 15 23 18 11 10 7 23 13 16 48 28 15 8 30 28 28 25 32 25 23 6 30 13 30 29 22 34 39 18 19 37 35 13 12 24 14 17 5 31 33 27 16 18 22 16 13 18 23 43 14 36 27 14 28 6 12 21 23 29 28 28 41 24 32 26 19 29 9 5 5 7 6 15 7 33 21 19 29 20 51 36 29 28 29 24 21 19 29 18 21 22 31 24 12 23 21 27 25 21 28 13 23 28 26 9 31 21 8 12 33 15 27 26 28 51 31 31 25 17 11 20 29 29 20 27 7 8 8 11 10 21 21 28 29 22 11 16 28 31 19 36 36 19 24 27 31 21 36 9 12 28 29 38 16 17 15 33 9 14 6 16 17 16 13 9 8 28 6 28 27 20 36 22 20 20	Open. Hide. 55 55 55 49 61 43 30 27 18 22 18 26 26 14 20 28 43 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 55 61 59 61 59 59 59 59 35 36 59 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 55 59 61 59 55 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 52 61 55 55 61 55 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 40 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 43 35 36 27 43 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 45 61 61 61 50 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 47 43 61 61 61 61 61 53 61 61 42 47 52 61 61 61 61 61 61 61 61 61 47 61 46 47 47 47 57 53 53 57 47 38 38 57 42 57 53 53 57 57 53 57 45 53 53 57 57 47 47 53 52 50 53 57 45 53 34 57 50 53 47 57 57 53 45 47 40 50 53 57 47 57 53 42 57 53 52 53 50 53 43 53 43 39 40 47 57 33 42 41 57 57 52 50 50 52 37 36 45 47 57 57 41 53 52 42 42 38 53 53 53 40 53 38 16 47 52 39 57 34 50 57 34 57 53 35 53 41 30 38 57 52 57 50 35 21 57 52 50 50 45 38 23 50 53 30 52 22 50 37 30 42 47 43 45 52 30 53 53 53 34 35 41 50 50 53 57 34 29 34 14 34 17 22 37 47 41 28 42 57 57 57 57 52 28 52 30 33 32 42 36 42 40 32 52 40 42 40 31 39 36 35 37 37 40 44 42 40 37 36 27 34 39 29 36 31 48 33 52 27 52 35 37 37 36 10 4 28 36 53 27 42 25 53 41 20 40 34 41 37 41 24 29 57 17 33 30 40 33 30 57 57 57 20 29 31 57 48 22 33 19 21 40 25 37 27 33 28 29 32 29 39 29 34 28 32 32 35 27 32 30 32 15 29 29 33 36 27 51 51 51 33 31 25 39 39 23 11 31 6 46 45 15 24 32 23 20 31 30 24 32 30 12 11 10 8 20 15 47 26 51 46 45 45 45 30 18 45 30 23 22 5 45 51 9 13 22 51 37 15 7 46 29 21 12 29 23 29 24 29 29 26 46 38 34 30 24 25 12 24 28 31 16 29 12 29 34 41 34 51 46 9 25 13 43 33 22 22 29 20 51 23 14 32 8 9 12 21 23 18 26 34 22 9 29 19 29 29 34 25 33 21 21 7 8 8 15 33 39 20 12 10 10 10 16 17 29 19 13 35 27 11 14 41 12 36 6 19 34 31 24 22 36 10 23 23 43 14 19 21 27 16 21 16 6 5 22 28 15 22 18 51 18 17 15 31 28 8 38 8 14 14 20 15 35 15 30 9 29 10 12 12 13 17 13 36 9 19 15 17 17 9 5 15 9 10 8 4 12 23 21 22 13 28 13 17 26 33 14 23 17 30 20 17 12 17 15 26 18 35 25 7 15 6 9 10 4 7 22 19 6 4 4 8 3 8 3 8 6 12 8 4 8 21 9 21 18 11 9 13 12 7 6 7 7 5 6 6 5 9 9 13 5 5 5 9 17 11 6 6 13 9 19 11 21 6 3 3 6 12 5 3 6 4 4 8 16 4 4 16 5 5 3 5 7 10 16 11 14 8 9 16 6 5 6 12 14 19 5 3 2 4 23 21 4 5 9 5 3 6 7 4 3 6 25 27 20 15 17 9 5 4 3 7 3 5 6 22 4 6 9 11 8 12 5 3 5 3 9 15 4 4 10 16 27 21 8 8 7 10 14 4 1 1 1 3 5 5 6

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_95017392_95018417
seq2: B6Ng01-109N11.b_51_1079

seq1  GAATTCAATCAGACTAAAGAAAAAACAATCTCTAACCATGGAAAGCTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCAGACTAAAGAAAAAACAATCTCTAACCATGGAAAGCTCAT  50

seq1  TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAATTTTATTTAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAATTTTATTTAACA  100

seq1  TTTTTTAATCATAGAAAATTATAAATCAGGCAGGGTTTTATTTCTAAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAATCATAGAAAATTATAAATCAGGCAGGGTTTTATTTCTAAACT  150

seq1  TTTCAAAGATTATTATAAACCCAAATGTAGCTTTCTTTTAAACTGGTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGATTATTATAAACCCAAATGTAGCTTTCTTTTAAACTGGTTCC  200

seq1  AACTTAAATCAAAGGCACAGCACACAACTAAAACACTTTGATACGAATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAATCAAAGGCACAGCACACAACTAAAACACTTTGATACGAATTA  250

seq1  TTTTAGGTTCTAATATTTTTACATTATTTGAAAATTTTTGGAGAAACGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGTTCTAATATTTTTACATTATTTGAAAATTTTTGGAGAAACGTT  300

seq1  ATTTAGAAATTCAAATAACCCCATTAAAAATGGGGTACAGAGCTAAACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAAATTCAAATAACCCCATTAAAAATGGGGTACAGAGCTAAACAA  350

seq1  AGAATTCTCAACTGAGGAATACCAAAGGGCTGAGAAGCACCTGAAAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCTCAACTGAGGAATACCAAAGGGCTGAGAAGCACCTGAAAAAAT  400

seq1  GTTCAACATCCTTAGTCATCAGGGAAATACAAATTAAAAACCCTGAGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAACATCCTTAGTCATCAGGGAAATACAAATTAAAAACCCTGAGATT  450

seq1  CTACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCC  500

seq1  AAAAAAGCTCATTTTTGGAAGGCTGAGACCCACTTTGGGCTCTGTGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGCTCATTTTTGGAAGGCTGAGACCCACTTTGGGCTCTGTGTTTT  550

seq1  GGGCCACTCCACCTTTTAGGCTCTTCCATCTGTAATACATAATTCTTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCACTCCACCTTTTAGGCTCTTCCATCTGTAATACATAATTCTTGTC  600

seq1  TACTAAGCTCATGCTAGTTGTACCTGCTGATATTCTTGGCAATTTATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGCTCATGCTAGTTGTACCTGCTGATATTCTTGGCAATTTATCCA  650

seq1  ACATTTCTGGCCTCTTCAATGTGATGGCATCACCACTGTAACTAAGGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCTGGCCTCTTCAATGTGATGGCATCACCACTGTAACTAAGGCTA  700

seq1  CACCTAGAACCAATATTTATATGTAGGATCTTTTCAGGAATTGTGACTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAGAACCAATATTTATATGTAGGATCTTTTCAGGAATTGTGACTCT  750

seq1  TTCATCATTCTAAACCTCAGATTGTCTTTATGAGCCATTCAAATCTTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCATTCTAAACCTCAGATTGTCTTTATGAGCCATTCAAATCTTGAG  800

seq1  ACCAACTAAATCTGAGACCACTCCTTCCTATGATGGCCTTTTTCATGGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACTAAATCTGAGACCACTCCTTCCTATGATGGCCTTTTTCATGGAG  850

seq1  TCC-AATTTTGCTACAT-GGTGCCAACTCTCGGATTCTCCTCAGTAACC-  897
      ||| ||||||||||||| ||||||||||||||||||||||||||||||| 
seq2  TCCAAATTTTGCTACATGGGTGCCAACTCTCGGATTCTCCTCAGTAACCT  900

seq1  TTTTAATACTGTGTTA-TATACTGCAATGGTCTCTCCTGATTTCTCATTG  946
      |||||||||||||||| |||||||||||||| ||||||||||||||||||
seq2  TTTTAATACTGTGTTATTATACTGCAATGGTTTCTCCTGATTTCTCATTG  950

seq1  CAAAGTCAACTGCTCTCCAGAATTCTTTCATCTCTGAATCTCTCATGCTA  996
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CAAAGTCAACTGCTCTCCAGAATTCTTTCATCTCTG-ATCTCTCATGCTA  999

seq1  CCAAAATAGTAACATGGGAGAC-TCTTACAA  1026
      |||||||||| ||||||||||| ||||||||
seq2  CCAAAATAGT-ACATGGGAGACTTCTTACAA  1029

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information