MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-110I06
Chromosome	X (Build37)
Map Location	44,684,009 - 44,685,182
singlet/doublet	singlet
Overlap gene	none
Upstream gene	EG245405, LOC665632
Downstream gene	EG434775, LOC236775, LOC100040133, LOC100040145, EG624187, Smarca1, LOC676253, Ocrl, LOC270596, LOC665672, Apln, Xpnpep2, 1200013B08Rik, Zdhhc9, Utp14a, LOC637576
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG245405 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245405 MGI:3647751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 130 ESTs, 8 Proteins

name	LOC665632 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665632
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 13 Proteins pseudo : _no_value

name	EG434775 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434775 MGI:3645717
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC236775 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:236775
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 Proteins pseudo : _no_value

name	LOC100040133 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040133
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100040145 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040145
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG624187 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624187 MGI:3647765
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Smarca1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93761 MGI:1935127
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC676253 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676253
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 1137 ESTs, 10 Proteins

name	Ocrl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320634 MGI:109589
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC270596 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:270596
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC665672 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665672
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 608 ESTs, 74 Proteins pseudo : _no_value

name	Apln (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30878 MGI:1353624
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Xpnpep2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170745 MGI:2180001
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1200013B08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74131 MGI:1921381
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zdhhc9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208884 MGI:2444393
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Utp14a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72554 MGI:1919804
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC637576 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:637576
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG245405 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271556 GeneID:245405 MGI:3647751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 130 ESTs, 7 Proteins product : predicted gene, EG245405 transcript_id : XM_141727.9

name	EG624187 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83000999 GeneID:624187 MGI:3647765
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG624187, transcript variant 2 transcript_id : XM_897035.1

name	Smarca1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31340953 GeneID:93761 MGI:1935127
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 transcript_id : NM_053123.3

name	LOC676253 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271557 GeneID:676253
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 1137 ESTs, 10 Proteins product : similar to ribosomal protein L21 transcript_id : XM_001476333.1

name	Ocrl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46195806 GeneID:320634 MGI:109589
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oculocerebrorenal syndrome of Lowe transcript_id : NM_177215.3

name	Apln (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123702126 GeneID:30878 MGI:1353624
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apelin transcript_id : NM_013912.3

name	Xpnpep2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778993 GeneID:170745 MGI:2180001
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound transcript_id : NM_133213.2

name	1200013B08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142379896 GeneID:74131 MGI:1921381
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1200013B08 gene transcript_id : NM_028773.3

name	Zdhhc9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363721 GeneID:208884 MGI:2444393
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, DHHC domain containing 9 transcript_id : NM_172465.2

name	Utp14a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51889715 GeneID:72554 MGI:1919804
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast) transcript_id : NM_028276.1

name	EG245405 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63744454 GeneID:245405 MGI:3647751
definition	codon_start : 1 product : hypothetical protein protein_id : XP_141727.3

name	EG624187 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83001000 GeneID:624187 MGI:3647765
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_902128.1

name	Smarca1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30578398 CCDS:CCDS30104.1 GeneID:93761 MGI:1935127
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence TAS] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 protein_id : NP_444353.2

name	LOC676253 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271558 GeneID:676253
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476383.1

name	Ocrl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46195807 GeneID:320634 MGI:109589
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0004437 - inositol or phosphatidylinositol phosphatase activity [Evidence IDA]; GO:0004439 - phosphoinositide 5-phosphatase activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : phosphatidylinositol polyphosphate 5-phosphatase protein_id : NP_796189.2

name	Apln (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7304895 GeneID:30878 MGI:1353624
definition	GO_function : GO:0005179 - hormone activity [Evidence IEA]; GO:0005102 - receptor binding [Evidence ISS] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] codon_start : 1 note : preproapelin product : apelin protein_id : NP_038940.1

name	Xpnpep2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133778994 CCDS:CCDS30106.1 GeneID:170745 MGI:2180001
definition	GO_function : GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008235 - metalloexopeptidase activity [Evidence IEA]; GO:0008451 - X-Pro aminopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; membrane-bound aminopeptidase P product : X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound isoform 1 protein_id : NP_573476.2

name	1200013B08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311907 GeneID:74131 MGI:1921381
definition	codon_start : 1 note : Novel SH3 and SAM domain containing protein product : hypothetical protein LOC74131 protein_id : NP_083049.1

name	Zdhhc9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369636 GeneID:208884 MGI:2444393
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger, DHHC domain containing 9 protein_id : NP_766053.1

name	Utp14a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51889716 CCDS:CCDS30107.1 GeneID:72554 MGI:1919804
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0007046 - ribosome biogenesis [Evidence IEA] codon_start : 1 note : Jsd-like X-linked product : UTP14, U3 small nucleolar ribonucleoprotein, homolog A protein_id : NP_082552.1

name	LOC236775 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:236775
definition	number : 1 pseudo : _no_value

name	LOC100040133 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040133
definition	number : 1 pseudo : _no_value

name	LOC100040145 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040145
definition	number : 1 pseudo : _no_value

name	LOC100040145 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040145
definition	number : 2 pseudo : _no_value

name	LOC270596 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:270596
definition	number : 1 pseudo : _no_value

name	LOC637576 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:637576
definition	number : 4 pseudo : _no_value

name	LOC637576 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:637576
definition	number : 3 pseudo : _no_value

name	LOC637576 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:637576
definition	number : 2 pseudo : _no_value

name	LOC637576 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:637576
definition	number : 1 pseudo : _no_value

name	LOC665632 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271529 GeneID:665632
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 13 Proteins product : similar to laminin receptor pseudo : _no_value transcript_id : XR_031534.1

name	EG434775 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94407352 GeneID:434775 MGI:3645717
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, EG434775 transcript_id : XR_001556.1

name	LOC665672 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271559 GeneID:665672
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 608 ESTs, 74 Proteins product : similar to ENSANGP00000012700 pseudo : _no_value transcript_id : XR_032688.1

clone name	MSMg01-517H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296C07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-163L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375C15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-379E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249E17
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-110I06.b	B6Ng01-110I06.g
ACC	DH917115	DH917116
length	1,173	1,145
definition	DH917115\|Mus musculus domesticus DNA, BAC clone: B6Ng01-110I06, 5' end.	DH917116\|Mus musculus domesticus DNA, BAC clone: B6Ng01-110I06, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcgatcttttcaagacttttatcatgattgggtgttggatcttg ttgaatgctttttccatttctaacgagatgatcatgtggtttttgtcttt gagtttgtttatatactggattacattgatggatttctgtatattgaacc atccctgcatctctgggatgaaacctacttggtcaggatggatgattgtt ttgatgtgttcttggattcggttagcgagaactttattgaggatttttgc atcgatattcataaaggaaattggtctgaaattctctatctttgttgggt ctttttgtggtttaggtatcagagtaattgtggcttcatagaatgagttg ggtagagtaccttatgtttctattttgtgttacagtttgtgaagaactgg gattagatcttctttgaaggcctgatagaactctgcactaaacccatctg gtcctgggctttttttggttggaagactattaatgactgcttctatttct ttaggggatataggactgtttagatcattaacctgatcttgatttaactt tggtacctggtatatgtctagaaacttgtccatttcatccaggttctcca gttttgttcagtatagccttttgtagaaggatctgatggtgttttggatt tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat tagaatgctttccctgtgccctctagtgagtctggctaagggtttatcta tctttttgattttctcaaagaaacagctcctcaattggttgattctttga atagttctttttgtttccacttggttgatttcgcccctgagattgaatat ttcctaccatctactcctcttgggtgaatttgcttccttttttctagagc ttttagatgtgtgtcaagctgctagtgtgtgctctctctagtttcttctt tagcactcagagctatgagtttccctcttagaatgctttcattgtgtccc ataaggttgggtatgttgtggctcattcataactcttaaaagtctttatt ctttcttatactctgacaaggatcatgagaaaagttgtcagttccgtgaa tgttggctccttattatgtgtgtatgagatacagctaagcattggtctga aaggatcatggacaatttcaata	gaattcatcctgttagtggcacccttataagtatgattgaatatgtgtaa ttaatttggagttataaattcatgtgaaattttatgaacttattttcaat acagagaaagtaagacctttagatttatcatttttatacattcatttgat ttttaagaaatctttcattctcaagcagatagatatctttgtcagattac taaagctcttcagagggacatgctcaaagtgacacacactgctcacgctg ttcctcatataggcatccagattgttgccttatatatgatagtctgctct tctttcactaagccccagctgctatatgcacaccatagagcctcaataga aagactgctcacacaccaacagtatgcttcctctgttctgtgtcccagac cttaacaggaatcctatagactctgaggactcacaccctcttttagctaa tgtgatgaatctaaagtaaacataggtaaatgggagaggtggtgaaataa atcaaaaggcctaatttacactggaaatttccatgagagtgttttctcat tgtatataagctacttgctttgtcctgcttataaagcaggcaagctgctc caaatgtgatattggacatgactggaattgattgcccatcacccaccggc aaattgatcttattaactgtttcctggtagtgggaaccacctatctctct ctctttgtgggaatgtgccttttttttcagcatggcccaaggcattcctc tgctgtcaggacaatgctattgctgttgcttttaacaaatgctcctggaa cacagtcttccctgggggaattcctcttaccatgaaatcagaccatgctt ttactttatgggaacatttttcaacatgcacctaaagctgtaaaaaaaaa aaaatacaaatttcaaatacatattctttaccaccctccactgctggcaa tgtgggaatcaaagtaaaatacaacaacatgagcagactaggcatctgcc atgaaacagtctaagtgctatgcctcattatgatgaagctgtggagtaaa tcctgcgctgtactcagaatacatgaaatgtctctcagctactccagcca gtactctaatggaagaatccctgtaaccttgaagtcaagaattat
quality values	Open. Hide. 61 47 31 38 61 61 47 61 47 61 47 61 61 61 61 61 49 13 40 61 61 61 61 61 52 49 43 49 23 13 36 36 26 24 35 55 59 59 59 59 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 59 44 61 61 61 61 61 59 55 59 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 37 55 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 22 55 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 53 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 57 57 57 57 57 53 57 57 53 53 57 57 57 57 57 57 46 45 53 57 57 53 47 41 53 57 53 50 53 57 57 57 53 57 53 57 57 53 52 57 57 57 53 57 42 47 53 57 53 53 45 53 53 47 33 53 46 53 53 50 53 53 53 40 53 53 57 57 57 52 45 53 53 32 45 53 52 53 53 38 52 57 45 57 57 53 53 38 47 42 57 53 36 57 38 38 53 50 57 52 39 57 47 33 57 30 57 57 53 57 52 50 45 57 52 42 42 53 52 30 33 52 50 42 52 52 41 21 50 57 30 53 45 52 52 50 52 35 31 57 53 50 57 57 53 34 38 34 57 42 41 50 38 52 24 57 57 53 57 37 37 33 52 36 42 42 28 41 52 30 46 36 46 41 39 44 57 53 44 57 35 37 27 57 53 37 33 37 40 40 44 53 41 37 35 37 40 53 53 23 41 25 22 6 33 40 25 57 53 37 33 47 40 36 37 41 48 57 57 57 53 34 37 15 57 57 48 37 36 30 31 57 46 31 48 51 27 30 28 38 34 41 36 48 33 32 27 48 30 26 29 32 29 41 35 39 26 35 35 30 46 32 30 34 38 29 37 35 33 23 29 22 51 51 51 30 15 13 51 36 35 29 22 34 27 24 51 30 28 29 29 31 24 51 41 29 28 31 51 43 41 30 35 41 23 41 21 38 29 29 39 32 23 27 51 36 22 33 25 35 34 29 28 28 30 28 28 32 29 26 31 27 29 23 30 38 39 26 14 31 29 27 29 46 26 21 23 23 31 23 31 41 51 51 51 51 51 26 26 26 19 35 23 26 16 51 51 41 29 19 28 18 35 28 23 26 6 16 31 25 27 31 34 28 29 23 33 28 20 19 29 13 33 21 34 26 31 26 22 28 27 34 29 34 27 26 51 27 31 20 20 31 19 51 20 23 12 6 11 23 31 19 12 15 35 21 25 25 26 28 19 24 9 21 35 17 13 44 13 29 32 15 18 25 13 35 30 20 33 17 19 42 21 30 14 20 13 19 9 22 23 19 44 26 11 18 18 29 10 10 34 28 19 44 28 5 7 4 12 17 13 30 11 29 23 14 29 9 12 16 4 3 3 4 4 3 8 11 6 4 4 25 37 31 26 12 16 25 8 21 14 6 4 6 17 10 32 15 4 6 7 10 24 5 7 22 13 9 6 9 20 6 14 11 15 5 7 5 3 4 9 9 7 24 8 4 3 3 3 3 4 14 5 4 9 17 8 5 4 3 4 4 6 13 7 12 6 8 14 16 5 14 7 13 6 12 4 12 9 4 3 4 16 4 7 4 14 9 20 9 7 3 12 5 7 6 7 5 27 21 5 5 17 17 6 18 10 12 17 7 12 3 4 9 4 4 4 4 12 9 4 7 6 18 7 3 2 9 13 7 23 11 4 11 5 5 3	Open. Hide. 61 61 61 59 49 38 33 49 43 28 28 30 27 26 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 59 61 61 61 59 59 61 61 61 59 61 59 59 43 37 59 59 61 61 59 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 59 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 61 59 61 59 59 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 38 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 35 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 42 38 61 61 53 61 61 61 61 61 61 52 57 57 57 57 57 57 47 53 57 53 53 53 37 53 57 57 45 57 53 52 53 33 57 57 53 57 53 53 38 53 57 57 50 53 53 53 50 47 57 53 57 57 53 53 57 57 57 57 57 57 57 57 53 53 57 53 57 50 57 47 53 50 52 57 57 53 45 53 32 46 38 53 43 38 53 57 57 50 53 50 53 39 52 53 52 52 39 57 53 45 37 39 53 57 37 43 45 38 52 53 53 52 50 57 53 57 45 32 57 53 42 36 57 47 35 57 46 34 52 50 33 37 41 44 30 38 52 53 53 47 37 57 50 43 42 50 42 50 52 50 37 37 44 39 24 44 37 37 52 26 53 36 47 40 40 53 52 27 52 40 37 40 53 40 33 42 36 37 35 36 34 34 40 52 40 53 37 52 37 48 39 48 40 40 57 40 53 37 53 53 37 40 47 33 40 29 31 19 22 20 53 57 57 57 57 57 33 29 39 36 40 32 39 48 46 23 45 25 23 48 30 33 21 27 30 31 21 40 43 32 29 30 35 30 32 30 35 18 25 15 26 20 29 31 24 29 28 29 29 36 29 36 18 29 36 25 37 39 31 33 51 51 39 22 31 29 27 51 29 28 31 25 39 28 29 28 37 29 29 30 29 16 32 28 35 29 34 38 35 29 46 30 28 29 39 39 39 29 29 32 23 30 20 27 28 33 27 33 24 22 24 21 28 29 31 51 29 29 27 20 19 38 21 30 27 25 35 12 5 46 51 28 25 29 29 51 30 28 25 29 51 26 21 27 21 17 31 51 51 51 29 28 22 21 30 18 25 33 29 23 26 33 30 28 51 27 27 28 35 34 24 20 51 46 51 46 51 41 46 51 51 51 51 28 22 17 34 21 51 29 23 51 33 25 23 51 26 23 7 16 6 28 13 17 6 32 13 38 31 9 19 5 6 8 44 13 25 24 8 17 25 31 14 8 9 24 16 19 30 24 19 30 6 13 42 13 17 26 8 19 11 34 22 20 25 26 44 44 22 15 19 17 8 6 6 20 14 26 22 20 21 31 12 14 12 4 4 16 17 6 4 4 13 14 29 12 13 25 12 20 11 15 12 17 29 15 22 18 16 15 17 9 4 17 11 6 6 4 6 6 3 5 12 12 16 6 9 3 4 6 6 7 23 7 23 19 23 15 19 5 4 2 4 7 12 9 14 4 3 3 3 2 2 4 3 3 3 3 3 15 4 7 9 5 8 9 9 20 7 5 5 6 6 5 5 7 20 13 13 7 4 9 6 3 4 11 5 5 13 13 7 5 9 16 18 5 5 11 4 4 3 3 8 8 3 4 6 17 18 4 10 17 10 3 3 6 10 10 9 8 3 3 13 5 10 3 3 5 10 7 16 3 14 12 13 10 13 4 6 13 3 3 12 9 19

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_44684009_44685182
seq2: B6Ng01-110I06.g_70_1214

seq1  GAATTCATCCTGTTAGTGGCACCCTTATAAGTATGATTGAATATGTGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCTGTTAGTGGCACCCTTATAAGTATGATTGAATATGTGTAA  50

seq1  TTAATTTGGAGTTATAAATTCATGTGAAATTTTATGAACTTATTTTCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTGGAGTTATAAATTCATGTGAAATTTTATGAACTTATTTTCAAT  100

seq1  ACAGAGAAAGTAAGACCTTTAGATTTATCATTTTTATACATTCATTTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAAAGTAAGACCTTTAGATTTATCATTTTTATACATTCATTTGAT  150

seq1  TTTTAAGAAATCTTTCATTCTCAAGCAGATAGATATCTTTGTCAGATTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGAAATCTTTCATTCTCAAGCAGATAGATATCTTTGTCAGATTAC  200

seq1  TAAAGCTCTTCAGAGGGACATGCTCAAAGTGACACACACTGCTCACGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTCTTCAGAGGGACATGCTCAAAGTGACACACACTGCTCACGCTG  250

seq1  TTCCTCATATAGGCATCCAGATTGTTGCCTTATATATGATAGTCTGCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCATATAGGCATCCAGATTGTTGCCTTATATATGATAGTCTGCTCT  300

seq1  TCTTTCACTAAGCCCCAGCTGCTATATGCACACCATAGAGCCTCAATAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCACTAAGCCCCAGCTGCTATATGCACACCATAGAGCCTCAATAGA  350

seq1  AAGACTGCTCACACACCAACAGTATGCTTCCTCTGTTCTGTGTCCCAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGCTCACACACCAACAGTATGCTTCCTCTGTTCTGTGTCCCAGAC  400

seq1  CTTAACAGGAATCCTATAGACTCTGAGGACTCACACCCTCTTTTAGCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACAGGAATCCTATAGACTCTGAGGACTCACACCCTCTTTTAGCTAA  450

seq1  TGTGATGAATCTAAAGTAAACATAGGTAAATGGGAGAGGTGGTGAAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGAATCTAAAGTAAACATAGGTAAATGGGAGAGGTGGTGAAATAA  500

seq1  ATCAAAAGGCCTAATTTACACTGGAAATTTCCATGAGAGTGTTTTCTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAAGGCCTAATTTACACTGGAAATTTCCATGAGAGTGTTTTCTCAT  550

seq1  TGTATATAAGCTACTTGCTTTGTCCTGCTTATAAAGCAGGCAAGCTGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATAAGCTACTTGCTTTGTCCTGCTTATAAAGCAGGCAAGCTGCTC  600

seq1  CAAATGTGATATTGGACATGACTGGAATTGATTGCCCATCACCCACCGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTGATATTGGACATGACTGGAATTGATTGCCCATCACCCACCGGC  650

seq1  AAATTGATCTTATTAACTGTTTCCTGGTAGTGGGAACCACCTATCTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGATCTTATTAACTGTTTCCTGGTAGTGGGAACCACCTATCTCTCT  700

seq1  CTCTTTGTGGGAATGTGCCTTTTTTTTCAGCATGGCCCAAGGCATTCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGTGGGAATGTGCCTTTTTTTTCAGCATGGCCCAAGGCATTCCTC  750

seq1  TGCTGTCAGGACAATGCTATTGCTGTTGCTTTTAACAAATGCTCCTGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCAGGACAATGCTATTGCTGTTGCTTTTAACAAATGCTCCTGGAA  800

seq1  CACAGTCTTCCCTGGGGGAATTCCTCTTACCATGAAATCAGACCATGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCTTCCCTGGGGGAATTCCTCTTACCATGAAATCAGACCATGCTT  850

seq1  TTACTTTATGGGAAACATTTTTCAACATGCACCTAAAGCTGTAAAAAAAA  900
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTACTTTATGGG-AACATTTTTCAACATGCACCTAAAGCTGTAAAAAAAA  899

seq1  AAAAATACAAATTTCAAATACATATTCTTTACCACCCTCCACTGCCTGGC  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAAAATACAAATTTCAAATACATATTCTTTACCACCCTCCACTG-CTGGC  948

seq1  AATGTGGGAACCAAAGTAAAATAC-ACAACATGAAGCAAGGACTAAGGGC  999
      |||||||||| ||||||||||||| |||||||| ||||  |||||  |||
seq2  AATGTGGGAATCAAAGTAAAATACAACAACATG-AGCA--GACTA--GGC  993

seq1  ATTCTGCCATGAAACAGTCCTTAAGTGGCCTAGTGCCCTTCAAATTATGA  1049
      | |||||||||||||||||  ||||||  ||| ||||  ||  |||||| 
seq2  A-TCTGCCATGAAACAGTC--TAAGTG--CTA-TGCC--TC--ATTATG-  1032

seq1  ATGAAGCTGT-GAGTTACAATTCACTGGTGTCTGGTACTCAGAATACATG  1098
      |||||||||| ||||   || || |||   |   ||||||||||||||||
seq2  ATGAAGCTGTGGAGT---AAATC-CTGCGCT---GTACTCAGAATACATG  1075

seq1  AAATTGTCCTCCAGCTATACTCCAGCAGTTACTCTAAAATGGGAAGAATC  1148
      ||| ||||   ||||  |||||||||   ||||||||    |||||||||
seq2  AAA-TGTCTCTCAGC--TACTCCAGCCAGTACTCTAA---TGGAAGAATC  1119

seq1  ACTGTAGTCTTGGAGTCAAGGATTAT  1174
       |||||  |||| ||||||| |||||
seq2  CCTGTAACCTTGAAGTCAAGAATTAT  1145

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information