BAC Information

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BAC

Clone NameB6Ng01-111F01
ChromosomeX (Build37)
Map Location 95,750,000 - 95,751,132
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668244, Ar, LOC100042324
Downstream geneOphn1, Yipf6, LOC100042932, Stard8, LOC436219, Efnb1, Pja1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111F01.bB6Ng01-111F01.g
ACCDH917690DH917691
length3711,120
definitionDH917690|Mus musculus domesticus DNA, BAC clone: B6Ng01-111F01, 5' end.DH917691|Mus musculus domesticus DNA, BAC clone: B6Ng01-111F01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
catagaaatggggctttgatttttgagtttttgtcttttctaggataggc
aataactgctctaacaacttcaagatataagaagagacaatactaatagt
tgtatgtagtgagactttttgtttctttaaaaatcacagaaatattataa
gaatgttttaattttaatcccatgtgtgggatatggggctgcttcagagt
ttccaaagcagctgagtatgatttgcctcgtgctctcgcaggggtgtgat
tttgccagctacagataatttctgggattgtataatgtttggaattctgg
ggatattttagtgggtatataaacacaagggctctgagagaagtggtgtg
ttgatggttggttgttggttg

gaattctttgccttagtcatttctttgaaagacaaagagtttttctaggt
gttgctgtgctttctgagtatgccctggtttcatccagaaggctggtgac
atccaaacatgcagattgaagaggaaagttctctgtgcttctgtggaatt
agatgccctgcggtcatatccctacaatgtttttctgcggtgaaagcaaa
aaccaggtcatttaataaaagaaatttcactgggttttttcatttcaagt
tgaaaatgaaaaggaggtggtatggagtatccagccaccacggggcaaaa
ctaagcattcaatttaaatagtaaaactctgtcatgtagggtacttctga
aataatgggctacaatagagaaacatctttccatgttcaagatgttcctt
tattctgtaagaactacaaaaagtaaaggaattagttcaacaacttgtaa
gataattgcttttgagagaacatagatcagtgaagctgttattaaagtag
cagcagacaagtggccttgacatattacaagcctacaaaagctttagaaa
caacagcaacagaaaatccagacagaagtaaagtaacttgacaagatatt
ttcaatgaagaaaatccttcattttcatagggagatgcagtactttatgt
caaggacactaatagagggccttaaaagattgcctatgtgtaccgtgtgt
atgaaaccagagaaaagatgagatccctgcgcccattcatgtgcttctcc
gttaagtgtgcagaatctcttgtatgaatgtcctccctctgcagtctcat
catggaagtagtctttcaacatatcaggaaggatggtccacccactacct
accacttctgctgccttgtaagactctaaagagacccagcacaaattctt
ttggacctaagagtcttaatttagtctccactttgcaacataggcttgtc
attctctaggcctccacagcatcatacatgatagctggcaattctgtctt
gtacataaggaaatgtgaagccatgagctgaaatgagctgtccatggcag
attagaagttgataaaaaattcaggggtgagaacttatcaacagtccaaa
gcagtaggtgaaatgaatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_95750000_95751132
seq2: B6Ng01-111F01.g_68_1187 (reverse)

seq1  GGATTCATTTTCACTACTGCTTTGTGACTGTTTGATAAAGTTCTCAACCC  50
      ||||||||||   ||||||||||| ||||| ||||| ||||||||| |||
seq2  GGATTCATTTCACCTACTGCTTTG-GACTG-TTGAT-AAGTTCTCACCCC  47

seq1  TGGATTTTTTTATCAACTTCTAGATTCTGCTCATGGACAACTCATTTTCA  100
      | || ||||||||||||||||  | ||||| |||||||| |||| |||||
seq2  T-GAATTTTTTATCAACTTCT--AATCTGC-CATGGACAGCTCA-TTTCA  92

seq1  GCTCCTTGGGCTTCACATTTCCTTATGTACAAGACAGAATTGCCAGCTAT  150
      |||| |  ||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAT--GGCTTCACATTTCCTTATGTACAAGACAGAATTGCCAGCTAT  140

seq1  CATGTACTGATGCTGT-GAGGCCTAAGAGAATGACAAGGCTATGTTGCAA  199
      |||||| ||||||||| ||||||| ||||||||||||| |||||||||||
seq2  CATGTA-TGATGCTGTGGAGGCCT-AGAGAATGACAAGCCTATGTTGCAA  188

seq1  AGTGGAGACTAAATTAAGACTCTTAGGTCCAAAAGAATTTTGTGCTGGGT  249
      ||||||||||||||||||||||||||||||||||||| ||||||||||| 
seq2  AGTGGAGACTAAATTAAGACTCTTAGGTCCAAAAGAA-TTTGTGCTGGG-  236

seq1  TCTCTTTAGAGTCTTACAAGGCAGCAGAAGTGGTAGGTAGTGGGTGGACC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTAGAGTCTTACAAGGCAGCAGAAGTGGTAGGTAGTGGGTGGACC  286

seq1  ATCCTTCCTGATATGTTGAAAGACTACTTCCATGATGAGACTGCAGAGGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTCCTGATATGTTGAAAGACTACTTCCATGATGAGACTGCAGAGGG  336

seq1  AGGACATTCATACAAGAGATTCTGCACACTTAACGGAGAAGCACATGAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATTCATACAAGAGATTCTGCACACTTAACGGAGAAGCACATGAAT  386

seq1  GGGCGCAGGGATCTCATTCTTTTCTCTGGTTTCATACACACGGTACACAT  449
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGGCGCAGGGATCTCA-TCTTTTCTCTGGTTTCATACACACGGTACACAT  435

seq1  AGGCAATCTTTTAAGG-CCTCTATTAGTGTCCTTGACATAAAGTACTGCA  498
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGGCAATCTTTTAAGGCCCTCTATTAGTGTCCTTGACATAAAGTACTGCA  485

seq1  TCTCCCTATGAAAATGAAGGATTTTCTTCATTGAAAATATCTTGTCAAGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTATGAAAATGAAGGATTTTCTTCATTGAAAATATCTTGTCAAGT  535

seq1  TACTTTACTTCTGTCTGGATTTTCTGTTGCTGTTGTTTCTAAAGCTTTTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTACTTCTGTCTGGATTTTCTGTTGCTGTTGTTTCTAAAGCTTTTG  585

seq1  TAGGCTTGTAATATGTCAAGGCCACTTGTCTGCTGCTACTTTAATAACAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTTGTAATATGTCAAGGCCACTTGTCTGCTGCTACTTTAATAACAG  635

seq1  CTTCACTGATCTATGTTCTCTCAAAAGCAATTATCTTACAAGTTGTTGAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTGATCTATGTTCTCTCAAAAGCAATTATCTTACAAGTTGTTGAA  685

seq1  CTAATTCCTTTACTTTTTGTAGTTCTTACAGAATAAAGGAACATCTTGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTCCTTTACTTTTTGTAGTTCTTACAGAATAAAGGAACATCTTGAA  735

seq1  CATGGAAAGATGTTTCTCTATTGTAGCCCATTATTTCAGAAGTACCCTAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAAAGATGTTTCTCTATTGTAGCCCATTATTTCAGAAGTACCCTAC  785

seq1  ATGACAGAGTTTTACTATTTAAATTGAATGCTTAGTTTTGCCCCGTGGTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGAGTTTTACTATTTAAATTGAATGCTTAGTTTTGCCCCGTGGTG  835

seq1  GCTGGATACTCCATACCACCTCCTTTTCATTTTCAACTTGAAATGAAAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGATACTCCATACCACCTCCTTTTCATTTTCAACTTGAAATGAAAAA  885

seq1  ACCCAGTGAAATTTCTTTTATTAAATGACCTGGTTTTTGCTTTCACCGCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGTGAAATTTCTTTTATTAAATGACCTGGTTTTTGCTTTCACCGCA  935

seq1  GAAAAACATTGTAGGGATATGACCGCAGGGCATCTAATTCCACAGAAGCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACATTGTAGGGATATGACCGCAGGGCATCTAATTCCACAGAAGCA  985

seq1  CAGAGAACTTTCCTCTTCAATCTGCATGTTTGGATGTCACCAGCCTTCTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAACTTTCCTCTTCAATCTGCATGTTTGGATGTCACCAGCCTTCTG  1035

seq1  GATGAAACCAGGGCATACTCAGAAAGCACAGCAACACCTAGAAAAACTCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAACCAGGGCATACTCAGAAAGCACAGCAACACCTAGAAAAACTCT  1085

seq1  TTGTCTTTCAAAGAAATGACTAAGGCAAAGAATTC  1133
      |||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTCAAAGAAATGACTAAGGCAAAGAATTC  1120


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