BAC Information

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BAC

Clone NameB6Ng01-112L23
ChromosomeX (Build37)
Map Location 39,797,306 - 39,797,841
singlet/doubletsinglet
Overlap genenone
Upstream geneGria3, LOC100039802, LOC676077, Thoc2, LOC665488, EG333830, LOC100039838, Birc4, Stag2
Downstream geneLOC100039899, Sh2d1a, Odz1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112L23.bB6Ng01-112L23.g
ACCDH918730DH918731
length9581,193
definitionDH918730|Mus musculus domesticus DNA, BAC clone: B6Ng01-112L23, 5' end.DH918731|Mus musculus domesticus DNA, BAC clone: B6Ng01-112L23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcctatcacataataatcaaaacaccaaatacactaaagaaag
aaaaaaattaaaatcagtaagggaaaaaggtcaagtaacatataaaggca
gacctttcagaattacaccagatttctcaccagggattatgaaagctaga
agatcctggtcagatttcatactgaccataagaaacacaaatgccagccc
aggctactctagccagcaaaactctcaatcctcatagacagagaaacaag
atattatatgagaaaaccaaatttatgaaatctttccacaaatcaacccc
tacaaaggatattagatggaaaacactaacacaaggattgaaactacacc
ctagaagaagcaagaaattaatctttcaacaaacctagacaaacataatt
ccacctttaacaagaaaattaaaaggaagttacagtcacttttccttaat
atctcttaatatgaaaattattattaccaacataacctagtcgattgaaa
ttcaaaaatatgaggaattagaaatttatctgctatcgggcctggtgaga
tgtctcagagggtaagcgcactgactgctcttcccgaaggttctgagttc
aaatcccagcaaccacatggtggctcactaccatctgtactgagttctga
tgccctcttctggtgtggctgaagacagctacagtgtacttacatataag
aaaaaaagaaaggaagaaagaaagaaagaaagaaaggaaggaaggaagga
aggaaggaaggaaggaaggaaggaaggaagaagtttgtcttctatcatcc
tgtggtatcttctgattttggttaatgggagaaaaaggtccaatactgta
cagcccatatacacttttctgcttgtttgtatgttgacaggattcttgct
tctgtgcccacatagtggtcttgaaatcaagcttctcctatctcagcctt
ctctattt
gaattcaataactcacttaaagaaatacaggagaacactgctaaagagtt
acaagtccttaaagaaaaacaggaaaacactgctaaagagttacaagtcc
ttaaagaaaaacaggaaaacacaaccaaacaggtagaagtccttatagaa
aaacaggaaaacacatccaaacaggtgatggaaatgaacaaaaccatact
agacctaaaaagggaagtagacacaataaagaaaacccaaagtgaggcaa
cgctggagatagaaaccctaggaaagaaatctggaaccatagatgccagc
atcagcaacagaatacaagagatggaagagagaatctcaggtgcagaaga
ctccatagagaacatcggcacaacaatcaaagaaaatggaaaatgcaaaa
agatcctaactcaaaacatccaggaaatccaggacacaatgagaagacaa
aacctaaggataataggagtggatgagaatgaagattttcaactcaaagg
accagcaaacatcttcaacaaaattattgaagaaaacttcccaaatctaa
agaaagagatgcccatgaacataaaagaagcctacagaactccaaataga
ctggaccagaaaagaaattccacccgacacataataatcagaacaccaaa
tgcactaaataaagatagaatactaaaagcagtaagggaaaaaggtcaag
taacatataaaggcaagcctatcagaattacaccagatttttcaccagag
actatgaaagccagaagagcctggacagatgttatacagacactaagaga
acacaatgccagcccaggctactatacccggccaaactctcaattaccat
agatggagaaaccaaagtattccacgacaaaactaaattcacccattatc
tctccacgaatccagcccttcaaaggataataacagaaaaaaaccaatac
aaggacgggaaccacgccctagaaaaaacaaggagatattccctcacaaa
cctaaagaagacagccacaagaacagaatgccaacttacaacaaaaataa
caggagcaacattacctttccttatatctcttaatatcatggaactcatc
cccaataaaagactgaattacgactggctaacaaaggaccacatctgctg
cttacgtatccatcctagcaaagaccgaacacttccctctgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_39797306_39797841
seq2: B6Ng01-112L23.b_49_566

seq1  AATTCCTCTGGTCACATAATAATC-AAACACTGAATGCACTAAGCAAAGA  49
      ||||||||   ||||||||||||| ||||||  ||| ||||||  |||||
seq2  AATTCCTCCTATCACATAATAATCAAAACACCAAATACACTAAAGAAAGA  50

seq1  AAGAATTTTAAAAGCAGTAAGGGGAAAAGGTCAAGTAACATATAAAGGCA  99
      || ||  |||||| ||||||||| ||||||||||||||||||||||||||
seq2  AA-AAAATTAAAATCAGTAAGGGAAAAAGGTCAAGTAACATATAAAGGCA  99

seq1  GACCTATCAGAATTACACCAGACTTCTCACCAGAGACTATGAAAGCTAGA  149
      ||||| |||||||||||||||| |||||||||| || |||||||||||||
seq2  GACCTTTCAGAATTACACCAGATTTCTCACCAGGGATTATGAAAGCTAGA  149

seq1  AGATGTCTAGCTTTCATGTCTAGGCAGATGTCATACAGACCCAAAGGGAA  199
      ||||               || | ||||| |||||| || ||| | | ||
seq2  AGAT--------------CCTGGTCAGATTTCATACTGA-CCATAAGAAA  184

seq1  CACAAATGCCAGCCCAGGCTACTATACACAGCAAAACTCTCAATCACCAT  249
      ||||||||||||||||||||||| ||  |||||||||||||||||  |||
seq2  CACAAATGCCAGCCCAGGCTACTCTAGCCAGCAAAACTCTCAATCCTCAT  234

seq1  GGACGGAGAAAACAAGATATTCCATGACAAAACCAAATTTACACAATATC  299
       ||| ||| ||||||||||||  |||| ||||||||||||  |  | |||
seq2  AGACAGAG-AAACAAGATATTATATGAGAAAACCAAATTT--ATGAAATC  281

seq1  TTTCCACAAATCCAGCCCTACAAAGGATAATAGATGGAAAACACCAACAC  349
      |||||||||||| | |||||||||||||| |||||||||||||| |||||
seq2  TTTCCACAAATCAACCCCTACAAAGGATATTAGATGGAAAACACTAACAC  331

seq1  AAGGAGTGAAACTACACCCTAGAAGATGCAAGAAAGTAATCTTTCAACAA  399
      ||||| |||||||||||||||||||| |||||||| ||||||||||||||
seq2  AAGGATTGAAACTACACCCTAGAAGAAGCAAGAAATTAATCTTTCAACAA  381

seq1  GCCCACACAAACATAATTCCACCTCTAACAAGAAAATTAACAGGAAGTAG  449
       || | |||||||||||||||||| ||||||||||||||| |||||||  
seq2  ACCTAGACAAACATAATTCCACCTTTAACAAGAAAATTAAAAGGAAGTTA  431

seq1  CAATCACTTTTCCTTAATATCTTTTAATATGAAAATTAATATTACCAACA  499
      || ||||||||||||||||||| ||||||||||||||| |||||||||||
seq2  CAGTCACTTTTCCTTAATATCTCTTAATATGAAAATTATTATTACCAACA  481

seq1  TATCCTAATCAATTGAAATTCAAAAATATGAGGAATT  536
      || |||| || ||||||||||||||||||||||||||
seq2  TAACCTAGTCGATTGAAATTCAAAAATATGAGGAATT  518