BAC Information

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BAC

Clone NameB6Ng01-113J02
ChromosomeX (Build37)
Map Location 4,789,968 - 4,791,082
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC627187, LOC100042185, OTTMUSG00000016407, OTTMUSG00000016437, OTTMUSG00000016420, LOC547057, EG546327, EG668965, LOC546185, LOC100043933, LOC670673, LOC100042254, LOC100043934, LOC100042267, LOC100042275, LOC668967, LOC434724, LOC100043935
Downstream geneLOC668968, LOC546182, Mycs, LOC668969, LOC668970, OTTMUSG00000016453, LOC627412, LOC436185, LOC668971, LOC100043936, LOC668972, Nudt11, LOC208428, AU022751, Nudt10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113J02.bB6Ng01-113J02.g
ACCDH919330DH919331
length1,1141,188
definitionDH919330|Mus musculus domesticus DNA, BAC clone: B6Ng01-113J02, 5' end.DH919331|Mus musculus domesticus DNA, BAC clone: B6Ng01-113J02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttgtagaatagcaactctcaactctcgaagtgtttgctcaaa
ttccattgtccaattctgtaacataacgagacaaagtttttgacaaattt
gctgctcttgtagaattttcaaactaaacagaagtaacacaaaggccagg
catcttgtattcacagcccaactgagccaactgccaaagaatatccactt
gctcttggactaggtcgatgcattgatttatcaacatcaaccctccttgt
atctgtgagttggctgtggcctgtttatctaaggccattgtgactgtcat
agaaagctcattaatagtttgtattgtttgaacagtagtagatagagcaa
gtgccgaggccgtgatagaggcttcaaccaccgatgtggccaccagtcca
actatgatagcagaaataccaaaatctcttttccctcgaaacaaattcaa
tctattaggggcatctacaagaacaggaacaaatctaggcatgtgggtaa
ccaaagcaaaaggatatttcttagcatcccagcataaggcataaaaacat
tttttcttgtgagcaatctatctctatctgattctgatttaagcttctgt
tacttaccacccacaaaaacggggaccatacacatactggggtggtggta
aaatttacctctttctgttttttatatctaacattggaggtggtccattt
aaaagaatttggactcttcttatcagaccaaccggtcttcaaggtacttt
tccaatcaaagttcaattctcctttctcactagaacctcctccaatcatt
gccatgggggcgagatcagtacagcttccattaaccccacaaagcaccca
ctgatcaaagggtttagtattagttcggaggggtccatagtactaaaatc
attatccagcaaagtatcatttatacttctcttactatatatggggaaaa
gggaaaatatttctcctactgcccaagtataatttttagcttgggcacct
gtccaggtacattacattcttccatggaccctttctgcaaaagggtgcaa
tcctggtttgtgaagcggcttattttcagatctcaatctttcgggctggg
ccaccatcctctta
gaattctcacctgaggcataaaaatggcagagaagcacctgaaaaaatgt
tcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagatc
caactcacaccagtcagaatggctaagatcaaaaattcaggtgacagcag
atgctggcgtggatgtggagaaagaggaacactcctccattgttggtggg
attgcaggcttgtacaaccactctggaaatcagtctggcggttcctcaga
aaattggacatagtactaccggaggatccagcaatacctctcctgggcat
atatccagaagatgccccaactggtaagaaggacaaatgctccactatgt
tcatagcagccttatttataatagccagaagctggaaagaacccagatgc
ccctcaacagaggaatggataaggaaaatgtggtacatctacacaatgga
gtactactcagctattaaaaagaatgaatttatgaaattcctagccaaat
ggatggacctggagggcatcatcctgagtgaggtaacacattcacaaagg
aactcacacaatatgtactcactgataagtggatattagcccaaaaccta
ggatacccaagatataagatacaatttgctaaacacatgaaactcaagaa
aaaatgaagactgaagtgtggacactatgcccctccttaaaagtgggaac
aaaacacccttggaaggagttacagagacaaagtttggagctgagatgaa
aggatggtccatgtagagacttcccatatccagggatccaccccataatc
agcatcaaaacgctgacaccattgcatacaccagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccgggcctacaacaca
gaagtggatgctcccagtcgctaaggatggatcacaggctcccaatggag
gagctagagaagtagccaggacctaaagggatctgcacctctataggcag
aacacattatgaacctaaccagttccccggagcctcttgtatatagctgc
atattgtatcaatagatggccctagtcgcatcccttgcaaagagaaggtc
catcttgtaccgcaaactttaatttgccctgtcagggtatcgctcatggc
ccaaaaatagtgggaagtgttggcgtagatggatttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_4789968_4791082
seq2: B6Ng01-113J02.b_47_1160 (reverse)

seq1  TAAGAGGATGGTGGCCCAGCCGAAAAGGTGGAAGATCTAGAAATAAGCCG  50
      |||||||||||||||||||||  |||| | | ||||||  ||||||||||
seq2  TAAGAGGATGGTGGCCCAGCCCGAAAGATTG-AGATCTGAAAATAAGCCG  49

seq1  CCTTCACAACCAAGAATGGCACCCTTTTGCAAGGAAGGGTCCATGGAAG-  99
       |||||||| | || || |||||||||||| || ||||||||||||||| 
seq2  -CTTCACAAACCAGGATTGCACCCTTTTGC-AGAAAGGGTCCATGGAAGA  97

seq1  ATGTAATGTTACCTTGGACAGGTTGCCAAGCTAAAAAATATACTTGGGCA  149
      |||||||| |||| |||||||||  |||||||||||| ||||||||||||
seq2  ATGTAATG-TACC-TGGACAGGTGCCCAAGCTAAAAATTATACTTGGGCA  145

seq1  GTA-GAGAAATATTTTTCCTTTTCCCCATATATTAGT-AGAG-AGTAT-A  195
      ||| |||||||||||| ||||||||||||||| |||| |||| ||||| |
seq2  GTAGGAGAAATATTTTCCCTTTTCCCCATATA-TAGTAAGAGAAGTATAA  194

seq1  ATGATACTTTTGCTGGAT-ATGATTTTAGTACTATGGACCCCCTCCGAAC  244
      ||||||| |||||||||| ||||||||||||||||||| |||||||||||
seq2  ATGATAC-TTTGCTGGATAATGATTTTAGTACTATGGA-CCCCTCCGAAC  242

seq1  TAATACTAACCCTTTTGATCAGTGGTTGCTTTGTGGGGTTAATGGAAGCT  294
      ||||||||| || |||||||||||| ||||||||||||||||||||||||
seq2  TAATACTAAACCCTTTGATCAGTGGGTGCTTTGTGGGGTTAATGGAAGCT  292

seq1  GTACTGATCTCGCCCCCATGGCAATGATTGGAGGAGGTTCTAGTGAGAAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGATCTCGCCCCCATGGCAATGATTGGAGGAGGTTCTAGTGAGAAA  342

seq1  GGAGAATTGACCTTTGATTGGAAAAGTACCTTGAAGACCGGTTGGTCTGA  394
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATTGAACTTTGATTGGAAAAGTACCTTGAAGACCGGTTGGTCTGA  392

seq1  TAAGAAGAGTCCAAATTCTTTTAAAAGGACCACCTCCAATGTTAGATATA  444
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAAGAAGAGTCCAAATTCTTTTAAATGGACCACCTCCAATGTTAGATATA  442

seq1  AAAAACAGAAAGAGGTAAATTTTACCACCACCCCGGTATGTGTATGGTTC  494
      |||||||||||||||||||||||||||||||||| ||||||||||||| |
seq2  AAAAACAGAAAGAGGTAAATTTTACCACCACCCCAGTATGTGTATGGTCC  492

seq1  CCTTTTTTGTGGGTGGTAAGTAACAGAAGCTTAAATCAGAATCAGATAGA  544
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTTTTGTGGGTGGTAAGTAACAGAAGCTTAAATCAGAATCAGATAGA  542

seq1  GATAGATTGCTCACAAG-AAAAATGTTTTTATGCCTTATGTTGGGATGCT  593
      ||||||||||||||||| |||||||||||||||||||||| |||||||||
seq2  GATAGATTGCTCACAAGAAAAAATGTTTTTATGCCTTATGCTGGGATGCT  592

seq1  AAGAAATATCCTTTTGCTTTGGTTACCCACATGCCTAGATTTGTTCCTGT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATATCCTTTTGCTTTGGTTACCCACATGCCTAGATTTGTTCCTGT  642

seq1  TCCTGTAGATGCCCCCAATAGATTGAATTTGTTTCAAGGGAAAAGAGATT  693
      || |||||||||||| ||||||||||||||||||| ||||||||||||||
seq2  TCTTGTAGATGCCCCTAATAGATTGAATTTGTTTCGAGGGAAAAGAGATT  692

seq1  TTGGTATTTCTGCTATCATAGTTGGACTGGTGTCCACATCGGTGGTTGCA  743
      |||||||||||||||||||||||||||||||| ||||||||||||||| |
seq2  TTGGTATTTCTGCTATCATAGTTGGACTGGTGGCCACATCGGTGGTTGAA  742

seq1  GCCTCTATCACGGCCTCGGCACTCACTCTATCTACTACTGTTCAAACAAT  793
      |||||||||||||||||||||||  |||||||||||||||||||||||||
seq2  GCCTCTATCACGGCCTCGGCACTTGCTCTATCTACTACTGTTCAAACAAT  792

seq1  ACAAACTATTAATGAGCTTTCTATGACAGTCACAATGGCCTTAGATAAAC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTATTAATGAGCTTTCTATGACAGTCACAATGGCCTTAGATAAAC  842

seq1  AGGCCACAGCCAACTCACAGATACAAGGAGGGTTGATGTTGATAAATCAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCACAGCCAACTCACAGATACAAGGAGGGTTGATGTTGATAAATCAA  892

seq1  TGCATCGACCTAGTCCAAGAGCAAGTGGATATTCTTTGGCAGTTGGCTCA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCGACCTAGTCCAAGAGCAAGTGGATATTCTTTGGCAGTTGGCTCA  942

seq1  ATTCGGCTGTGAATACAAGATACCTGGCCTTTGTGTTACTTCTGTTCAGT  993
       || ||||||||||||||||| |||||||||||||||||||||||| |||
seq2  GTTGGGCTGTGAATACAAGATGCCTGGCCTTTGTGTTACTTCTGTTTAGT  992

seq1  TTGAAAATTCTACAAGAGCAGCAAATTTGTCAAAATCTTTGTCTCGTTAT  1043
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTGAAAATTCTACAAGAGCAGCAAATTTGTCAAAAACTTTGTCTCGTTAT  1042

seq1  GTTACAGAATTGGACAATGGAATTTGAGCAAACGCTTCAAGAGTTGAGAG  1093
      ||||||||||||||||||||||||||||||||| |||| |||||||||||
seq2  GTTACAGAATTGGACAATGGAATTTGAGCAAACACTTCGAGAGTTGAGAG  1092

seq1  TTGCTATTCTACAAGTGAATTC  1115
      ||||||||||||||||||||||
seq2  TTGCTATTCTACAAGTGAATTC  1114