BAC Information

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BAC

Clone NameB6Ng01-115F21
ChromosomeX (Build37)
Map Location 145,477,241 - 145,626,481
singlet/doubletdoublet
Overlap geneOtt
Upstream geneLOC100039511, LOC666812, LOC100039519, LOC434864, EG624096, LOC100039545, LOC666837, LOC100039553, LOC100034729, LOC666861, EG666864, LOC434866, EG666868, EG624260, LOC434865, EG624310
Downstream geneLOC666888, LOC100039598, LOC100039890, LOC100039612, EG666923, EG624378, LOC100039934, LOC100039629, LOC382243, EG666961, EG666968, OTTMUSG00000018988, LOC100039651, EG624568, LOC382244, LOC100039669, EG666982, EG624631
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115F21.bB6Ng01-115F21.g
ACCDH920651DH920652
length1,1091,109
definitionDH920651|Mus musculus domesticus DNA, BAC clone: B6Ng01-115F21, 5' end.DH920652|Mus musculus domesticus DNA, BAC clone: B6Ng01-115F21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(145,625,370 - 145,626,481)(145,477,241 - 145,478,108)
sequence
gaattcctgatgaacaagagtcagaggtaacagtgagcatatacatggag
gtagacaaacctaacagcacaactacacacacatgtgcacctgttcgcat
actaacagaagcacacagagatgtagccacatcttcatcatcatgcacac
acacacaagagattctggcagagaagaaaagaaaaagtccagagaattac
tttttctttgagtgcttgactagattgaacaaagcactgaatttgatacc
cagggcagcatctgatccagaaagattgtgccagtcttgaattaggggca
tcctattcttcatgacccaagggatgatgacctgtagtgagacattgttt
aaaaatgatactatggtaactaaaaaatttaaaattttacttcaggcaca
tggcttttcagagaagatttcctgctgtttgtcagactctagccagacct
tgttttctcatgcctctcctggttctgtattctataatctgaatcctcta
taccttttcttttctaatcattgtttttgttttagtagaaagggtctctg
tgtatgatagctcagtctggtctcacatttacaaccatgtacttgcctct
gcctcaccactgctaagattcaagtcatgtgttaccatgccctacaactt
ctccccatttctttcactcctgtgttttcctgtttccagctcctggtcta
actctattcttaattctgtgcttccagtcacttactcccttctcaccagt
gtgcagaccctcctgttcctgcagcctatgtaacttgttaaacattttat
cccatattcacattcatactcccacagacagactcacacagacacaaaca
cacccaaatacacagtcgcacacattcacagaaacatacacacacagaat
acagagacactcagacacacacacacacacacacacacacacacacacac
acacacacacacacagaggcacacacagatacacacacagacccccacag
acccacacagacccccacgcacaccactttcgcttttcttgtgccctgta
atgctaacaatgggctgcttaatggatgccagggaatgttcaagagtgaa
agaccgaaa
gaattcagtgagaatattatctattcattaacattcaaatttacttcaag
tagagatggtgaaactaattaggcattacaaaaaacagagctagaatacc
tcagggctagtctgcagggtgatttcttaggacagtagccagtcttaccc
aaacaagggaatgtacaatggcctagctaataggtaggtttaccatgtga
gagttagggaatcccactgagacaggaaacttcactacagccaggtataa
caggcaacattgcatattagaagcaagttggtgaattcttctgacaactg
gagattctccacagatatttaagagaaaatccaatttcactcatacaaga
atttatcaaggcctaggaaataggatgtttgtggtattgcattattcatg
agaaggtctgctagagcagaactccctggtgctagctttcacaaggctca
aaggagtagcacaaattgtaattagggtgtgaaatccttacctgtgatta
gctgaccctaagcagagctgttttatctttactgaaatatgacatggttc
ctgtaaatccttttgaagtcattcctttgttttgtgtcaggtaacttcaa
tgtactttgcctgctgtgacattctacctctttgttttctatattatatt
ctacacaacctctcctgttgattttgtctgtcattccctgactccttgtc
accctgtaactagagacccattctatgcagacagggaacaaaaagggtct
gcggcaggggactagtttaagaacttaggacaaaagctggtgtgaggtat
agggagggaaacacaactgtcagtccagtagggcacccaatatgaggtgt
ctggcacatcctcacactctcaagtcatttcttcctgcagagcttccagg
caggactaagagatactaagaaccaggaatataatctcttctgatgtcct
tggtctccagaagaaacatctcagactttggagctagcatattagacaca
tgctcaagatcatgatgtatcatatgttaaataccaaaacaaaatgctgt
taatgtctctagatggaaatttagtacataataaaaaatgtctcggattc
actgaagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_145625370_145626481
seq2: B6Ng01-115F21.b_45_1153 (reverse)

seq1  TTTCTGTCTTTCACTCCTTGAACATTCCCTGGCAATCCACTAAGCAGCAC  50
      |||| |||||||||| ||||||||||||||||| ||||| |||||||| |
seq2  TTTCGGTCTTTCACT-CTTGAACATTCCCTGGC-ATCCATTAAGCAGCCC  48

seq1  ATTGTTAGCATTAACAAGGGCCACAAAGAAAAGCGAAAGTGGTTGTGCGT  100
      |||||||||||| |||  || ||| ||||||||||||||||| |||||||
seq2  ATTGTTAGCATT-ACA--GGGCAC-AAGAAAAGCGAAAGTGG-TGTGCGT  93

seq1  GTGTGTCTGTGTGTGTCTGTGTGTGTCTGTGTGTGTATCTGTGTGTGCCT  150
      | | ||||||||| ||||||| | ||||||||||||||||||||||||||
seq2  GGGGGTCTGTGTGGGTCTGTGGGGGTCTGTGTGTGTATCTGTGTGTGCCT  143

seq1  C----TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  196
      |    |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  193

seq1  GTCTGAGTGTCTCTGTATTCTGTGTGTGTATGTTTCTGTGAATGTGTGCG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAGTGTCTCTGTATTCTGTGTGTGTATGTTTCTGTGAATGTGTGCG  243

seq1  ACTGTGTATTTGGGTGTGTTTGTGTCTGTGTGAGTCTGTCTGTGGGAGTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTATTTGGGTGTGTTTGTGTCTGTGTGAGTCTGTCTGTGGGAGTA  293

seq1  TGAATGTGAATATGGGATAAAATGTTTAACAAGTTACATAGGCTGCAGGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTGAATATGGGATAAAATGTTTAACAAGTTACATAGGCTGCAGGA  343

seq1  ACAGGAGGGTCTGCACACTGGTGAGAAGGGAGTAAGTGACTGGAAGCACA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGGGTCTGCACACTGGTGAGAAGGGAGTAAGTGACTGGAAGCACA  393

seq1  GAATTAAGAATAGAGTTAGACCAGGAGCTGGAAACAGGAAAACACAGGAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAAGAATAGAGTTAGACCAGGAGCTGGAAACAGGAAAACACAGGAG  443

seq1  TGAAAGAAATGGGGAGAAGTTGTAGGGCATGGTAACACATGACTTGAATC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAAATGGGGAGAAGTTGTAGGGCATGGTAACACATGACTTGAATC  493

seq1  TTAGCAGTGGTGAGGCAGAGGCAAGTACATGGTTGTAAATGTGAGACCAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGTGGTGAGGCAGAGGCAAGTACATGGTTGTAAATGTGAGACCAG  543

seq1  ACTGAGCTATCATACACAGAGACCCTTTCTACTAAAACAAAAACAATGAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGCTATCATACACAGAGACCCTTTCTACTAAAACAAAAACAATGAT  593

seq1  TAGAAAAGAAAAGGTATAGAGGATTCAGATTATAGAATACAGAACCAGGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGAAAAGGTATAGAGGATTCAGATTATAGAATACAGAACCAGGA  643

seq1  GAGGCATGAGAAAACAAGGTCTGGCTAGAGTCTGACAAACAGCAGGAAAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATGAGAAAACAAGGTCTGGCTAGAGTCTGACAAACAGCAGGAAAT  693

seq1  CTTCTCTGAAAAGCCATGTGCCTGAAGTAAAATTTTAAATTTTTTAGTTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTGAAAAGCCATGTGCCTGAAGTAAAATTTTAAATTTTTTAGTTA  743

seq1  CCATAGTATCATTTTTAAACAATGTCTCACTACAGGTCATCATCCCTTGG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGTATCATTTTTAAACAATGTCTCACTACAGGTCATCATCCCTTGG  793

seq1  GTCATGAAGAATAGGATGCCCCTAATTCAAGACTGGCACAATCTTTCTGG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGAAGAATAGGATGCCCCTAATTCAAGACTGGCACAATCTTTCTGG  843

seq1  ATCAGATGCTGCCCTGGGTATCAAATTCAGTGCTTTGTTCAATCTAGTCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGATGCTGCCCTGGGTATCAAATTCAGTGCTTTGTTCAATCTAGTCA  893

seq1  AGCACTCAAAGAAAAAGTAATTCTCTGGACTTTTTCTTTTCTTCTCTGCC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCAAAGAAAAAGTAATTCTCTGGACTTTTTCTTTTCTTCTCTGCC  943

seq1  AGAATCTCTTGTGTGTGTGTGCATGATGATGAAGATGTGGCTACATCTCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTCTTGTGTGTGTGTGCATGATGATGAAGATGTGGCTACATCTCT  993

seq1  GTGTGCTTCTGTTAGTATGCGAACAGGTGCACATGTGTGTGTAGTTGTGC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTTCTGTTAGTATGCGAACAGGTGCACATGTGTGTGTAGTTGTGC  1043

seq1  TGTTAGGTTTGTCTACCTCCATGTATATGCTCACTGTTACCTCTGACTCT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGGTTTGTCTACCTCCATGTATATGCTCACTGTTACCTCTGACTCT  1093

seq1  TGTTCATCAGGAATTC  1112
      ||||||||||||||||
seq2  TGTTCATCAGGAATTC  1109

seq1: chrX_145477241_145478108
seq2: B6Ng01-115F21.g_321_1173

seq1  ACATTGCATATTAGAAGCAAGTTGGTGAATTCTTCTGACAACTGGAGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCATATTAGAAGCAAGTTGGTGAATTCTTCTGACAACTGGAGATT  50

seq1  CTCCACAGATATTTAAGAGAAAATCCAATTTCACTCATACAAGAATTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAGATATTTAAGAGAAAATCCAATTTCACTCATACAAGAATTTAT  100

seq1  CAAGGCCTAGGAAATAGGATGTTTGTGGTATTGCATTATTCATGAGAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCCTAGGAAATAGGATGTTTGTGGTATTGCATTATTCATGAGAAGG  150

seq1  TCTGCTAGAGCAGAACTCCCTGGTGCTAGCTTTCACAAGGCTCAAAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTAGAGCAGAACTCCCTGGTGCTAGCTTTCACAAGGCTCAAAGGAG  200

seq1  TAGCACAAATTGTAATTAGGGTGTGAAATCCTTACCTGTGATTAGCTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACAAATTGTAATTAGGGTGTGAAATCCTTACCTGTGATTAGCTGAC  250

seq1  CCTAAGCAGAGCTGTTTTATCTTTACTGAAATATGATATGGTTCCTGTAA  300
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCTAAGCAGAGCTGTTTTATCTTTACTGAAATATGACATGGTTCCTGTAA  300

seq1  ATCCTTTTGAAGTCATTCCTTTGTTTTGTGTCAGGTAACTTCAATGTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTTGAAGTCATTCCTTTGTTTTGTGTCAGGTAACTTCAATGTACT  350

seq1  TTGCCTGCTGTGACATTCTACCTCTTTGTTTTCTATATTATATTCTACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGCTGTGACATTCTACCTCTTTGTTTTCTATATTATATTCTACAC  400

seq1  AACCTCTCCTGTTGATTTTGTCTGTCATTCCCTGACTCCTTGTCACCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AACCTCTCCTGTTGATTTTGTCTGTCATTCCCTGACTCCTTGTCACCCTG  450

seq1  TAACTAGAGACCCATTCTATGCAGACAGGGAACAAAAAGGGTCTGCGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAGAGACCCATTCTATGCAGACAGGGAACAAAAAGGGTCTGCGGCA  500

seq1  GGGGACTAGTTTAAGAACTTAGGACAAAAGCTGGTGTGAGGTATAGGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACTAGTTTAAGAACTTAGGACAAAAGCTGGTGTGAGGTATAGGGAG  550

seq1  GAAAACACAACTGTCAGTCCAGTAGGGCACCCAATATGAGGTGTCTGGCA  600
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACACAACTGTCAGTCCAGTAGGGCACCCAATATGAGGTGTCTGGCA  600

seq1  CATCCTCACACTCTCAAGTCATTTCTTCCTGCAGAGCTTCCAGGCAGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCACACTCTCAAGTCATTTCTTCCTGCAGAGCTTCCAGGCAGGAC  650

seq1  TAAGAGATACTAAGAAACCAGGAAATATAAATCTCTTCTGATGTCCTTGG  700
      |||||||||||||| ||||||| ||||| |||||||||||||||||||||
seq2  TAAGAGATACTAAG-AACCAGG-AATAT-AATCTCTTCTGATGTCCTTGG  697

seq1  TCTCCAGAAGAAACATTCTCAGACCTTTGGAGCCTAGCATATTAGAACAT  750
      ||||||||||||||| ||||||| |||||||| |||||||||||| ||| 
seq2  TCTCCAGAAGAAACA-TCTCAGA-CTTTGGAG-CTAGCATATTAG-ACAC  743

seq1  ATGCTCAAAGATCATGATGTATCATATGTTAAAATACAAAACAAAAATGC  800
      |||||| ||||||||||||||||||||||| |||||| |||  |||||||
seq2  ATGCTC-AAGATCATGATGTATCATATGTT-AAATACCAAAACAAAATGC  791

seq1  TGTTAAAATGTCTCTAGATGGAGAATTTAGTACAATAATAAAAAATGTTC  850
      ||||  |||||||||||||||| |||||||||| ||||||||||||| ||
seq2  TGTT--AATGTCTCTAGATGGA-AATTTAGTAC-ATAATAAAAAATG-TC  836

seq1  CCAGATTCAACTGAAGTA  868
       | ||||| |||||||||
seq2  TCGGATTC-ACTGAAGTA  853