BAC Information

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BAC

Clone NameB6Ng01-115I13
ChromosomeX (Build37)
Map Location 43,719,777 - 43,720,893
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040038, EG385346, LOC100040075, Actrt1
Downstream geneEG245405, LOC665632
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115I13.bB6Ng01-115I13.g
ACCDH920773DH920774
length1,0251,123
definitionDH920773|Mus musculus domesticus DNA, BAC clone: B6Ng01-115I13, 5' end.DH920774|Mus musculus domesticus DNA, BAC clone: B6Ng01-115I13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacaaaggatttcaaatggcaggaaacacttaaaaaatgttc
aacatctctggccatcagggaaatgtgatgtagaactgctttgcaattac
attttacacctatcagaatgcctaagatcaaaactcaaggaactacacat
ggtggcaaggatttagaacatgaggaacatttttccaccattgctggtag
aagtgcaaattagtacagccattatgaaaatcaacatgatggttactcag
aaaactgtaaattgttctaactcaagaaacagctataccacttttaagca
tatgacccagtttatactatgtgaccactgggacatttgctcaaacctct
ttattgcacctttattcataatagtcaaaatctgtaaacaacctagatgt
ccctcaactgaagaatgaataaagaaaaagtggcagatttaaccaatgaa
ataactacccagtgattaaaaacaatgacacccaggatccatcccataat
cagcttccaaatgctgacaccattgcatacactagcaatattttgctaaa
aggacccagatagagctgtctcttgtgagactatgccggggcctagcaaa
cacagaaatggatgctcacagtcagctattggatggatcacagggccccc
aatggaggtgctagagaaagtacccaaggagctaaaggggtctgcaatcc
tataggtgaaacaacaatatgaactaaccagtaccccccggagctcatgt
ctctagctacatatgaatcagaagatggcctagtcggccatcagtggaaa
gagaggcccattggtcgtgcaaactttatatgcctcagtacaggggaacg
ccagggtcaagaagtaggagtgggtggggtgggggagcatgtgggagact
tttgggatacttggaaatgtaaatgaataaatacccaataaataataaaa
ttacaatgacacccttaattgcaggaaatgattggactagatatatgatg
atgtctctcatatgaagacagcagg
gaattctgtctctgccttctgagttctaaaattaaatgtgcgggtcacca
cttcctggtgacatattatattttgatcttaaatgatagtattagtaaat
tactagccatgtatcatggtagaggtgcatagatgtagataccttttggt
tatgatcactgtgagttatattttcatagggtgagaggtatagttaaata
tcatattatcaattgtatatcattgtggtttgattaagaacagcacccat
aggctcatatacttgaatattaaatcataaggtagtggaactattttaga
agtaatagaaggattaggaagtgtggtttcgtgagaaagtttgtcagtga
gcaggaacttcaagttttcaaaaatccatgtcaggctcagtctatctctc
tcctggtttaaagatcagaatgtagctcattgtttctgcttcagcaccaa
gaccacgtccatgattccaccatgctctgtcatgatggccgatggcatag
gaccaaacctctaaaattgtaagcaatctctccaccccaattaaatgact
tcttatataaaagttgccatgatcatgatatctcatcatagcaatagaac
agtgattaaaactgccataattttagtcatcagaaattagtaattatttt
agaaggaaagttattttaatcatacagtgctatagctgtaggatagtgct
atagttatattgagttttattttagtgtatcatattgtttatgctaatgg
aatggttataatatagttatcaataacattatgatggtaatgctggtaag
gctttatttttagtaggaaacttattttcagctacaattttagtgacacc
gtaaaatttatacgtattttatagtgacataaaatagtaaatgcagtact
gtatttatgaagtcttatttgtatttctggattatgaatagagctaaaat
gttagttttagcattatagttctacagctctcatcataatttcagtacta
gaattataatttacaatgatagaatatagttaaagtttatggttaaaatt
gctagccataatgcccctggtggctataaaatgaaggcaagatgtgtatt
gtaactggctaattattgagtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_43719777_43720893
seq2: B6Ng01-115I13.g_70_1192 (reverse)

seq1  TAACTACAATAA-TAG-CAG-TACAATACACATC-TGCCTTCA-TTTATA  45
      ||||| |||||| ||| ||| ||||||||||||| |||||||| ||||||
seq2  TAACT-CAATAATTAGCCAGTTACAATACACATCTTGCCTTCATTTTATA  49

seq1  G-CACCAGGGCCATTAT-GCTAGC-ATTTTAACCATAATACTTTAACTAT  92
      | |||||||| |||||| |||||| ||||||||||||| |||||||||||
seq2  GCCACCAGGGGCATTATGGCTAGCAATTTTAACCATAA-ACTTTAACTAT  98

seq1  AATTCTATCATTGTAAA-TATAATTCTAGTACTGAAATTATGATGAGAGC  141
       |||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  -ATTCTATCATTGTAAATTATAATTCTAGTACTGAAATTATGATGAGAGC  147

seq1  TGTAGAACTATAATGCTAAAACTAACATTTTAGCTCTATTCATAACTCCA  191
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGTAGAACTATAATGCTAAAACTAACATTTTAGCTCTATTCATAA-TCCA  196

seq1  GAAATACAAATAAGACTTCATAAATACAGTACTGCATTTACTA-TTTATG  240
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAAATACAAATAAGACTTCATAAATACAGTACTGCATTTACTATTTTATG  246

seq1  TCACTATAAAATACGTATAAATTTTACGGTGTCACTAAAATTGTAGCTGA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATAAAATACGTATAAATTTTACGGTGTCACTAAAATTGTAGCTGA  296

seq1  AAATAAGTTTCCTACTAAAAATAAAGCCTTACCAGCATTACCATCATAAT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGTTTCCTACTAAAAATAAAGCCTTACCAGCATTACCATCATAAT  346

seq1  GTTATTGATAACTATATTATAACCATTCCATTAGCATAAACAATATGATA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTGATAACTATATTATAACCATTCCATTAGCATAAACAATATGATA  396

seq1  CACTAAAATAAAACTCAATATAACTATAGCACTATCCTACAGCTATAGCA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAAATAAAACTCAATATAACTATAGCACTATCCTACAGCTATAGCA  446

seq1  CTGTATGATTAAAATAACTTTCCTTCTAAAATAATTACTAATTTCTGATG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGATTAAAATAACTTTCCTTCTAAAATAATTACTAATTTCTGATG  496

seq1  ACTAAAATTATGGCAGTTTTAATCACTGTTCTATTGCTATGATGAGATAT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAATTATGGCAGTTTTAATCACTGTTCTATTGCTATGATGAGATAT  546

seq1  CATGATCATGGCAACTTTTATATAAGAAGTCATTTAATTGGGGTGGAGAG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATCATGGCAACTTTTATATAAGAAGTCATTTAATTGGGGTGGAGAG  596

seq1  ATTGCTTACAATTTTAGAGGTTTGGTCCTATGCCATCGGCCATCATGACA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTACAATTTTAGAGGTTTGGTCCTATGCCATCGGCCATCATGACA  646

seq1  GAGCATGGTGGAATCATGGACGTGGTCTTGGTGCTGAAGCAGAAACAATG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGGTGGAATCATGGACGTGGTCTTGGTGCTGAAGCAGAAACAATG  696

seq1  AGCTACATTCTGATCTTTAAACCAGGAGAGAGATAGACTGAGCCTGACAT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACATTCTGATCTTTAAACCAGGAGAGAGATAGACTGAGCCTGACAT  746

seq1  GGATTTTTGAAAACTTGAAGTTCCTGCTCACTGACAAACTTTCTCACGAA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTTGAAAACTTGAAGTTCCTGCTCACTGACAAACTTTCTCACGAA  796

seq1  ACCACACTTCCTAATCCTTCTATTACTTCTAAAATAGTTCCACTACCTTA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACACTTCCTAATCCTTCTATTACTTCTAAAATAGTTCCACTACCTTA  846

seq1  TGATTTAATATTCAAGTATATGAGCCTATGGGTGCTGTTCTTAATCAAAC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAATATTCAAGTATATGAGCCTATGGGTGCTGTTCTTAATCAAAC  896

seq1  CACAATGATATACAATTGATAATATGATATTTAACTATACCTCTCACCCT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGATATACAATTGATAATATGATATTTAACTATACCTCTCACCCT  946

seq1  ATGAAAATATAACTCACAGTGATCATAACCAAAAGGTATCTACATCTATG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATATAACTCACAGTGATCATAACCAAAAGGTATCTACATCTATG  996

seq1  CACCTCTACCATGATACATGGCTAGTAATTTACTAATACTATCATTTAAG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCTACCATGATACATGGCTAGTAATTTACTAATACTATCATTTAAG  1046

seq1  ATCAAAATATAATATGTCACCAGGAAGTGGTGACCCGCACATTTAATTTT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATATAATATGTCACCAGGAAGTGGTGACCCGCACATTTAATTTT  1096

seq1  AGAACTCAGAAGGCAGAGACAGAATTC  1117
      |||||||||||||||||||||||||||
seq2  AGAACTCAGAAGGCAGAGACAGAATTC  1123