MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-115I13
Chromosome	X (Build37)
Map Location	43,719,777 - 43,720,893
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100040038, EG385346, LOC100040075, Actrt1
Downstream gene	EG245405, LOC665632
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040038 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040038
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG385346 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:385346 MGI:3644449
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040075 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040075
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Actrt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73360 MGI:1920610
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG245405 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245405 MGI:3647751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 130 ESTs, 8 Proteins

name	LOC665632 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665632
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 13 Proteins pseudo : _no_value

name	EG385346 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271555 GeneID:385346 MGI:3644449
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG385346 transcript_id : XM_888120.2

name	Actrt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370294 GeneID:73360 MGI:1920610
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : actin-related protein T1 transcript_id : NM_028514.2

name	EG245405 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271556 GeneID:245405 MGI:3647751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 130 ESTs, 7 Proteins product : predicted gene, EG245405 transcript_id : XM_141727.9

name	EG385346 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83000958 GeneID:385346 MGI:3644449
definition	codon_start : 1 product : hypothetical protein protein_id : XP_893213.1

name	Actrt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386318 CCDS:CCDS30102.1 GeneID:73360 MGI:1920610
definition	GO_component : GO:0005856 - cytoskeleton [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : actin-related protein T1 protein_id : NP_082790.1

name	EG245405 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63744454 GeneID:245405 MGI:3647751
definition	codon_start : 1 product : hypothetical protein protein_id : XP_141727.3

name	LOC100040038 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040038
definition	number : 2 pseudo : _no_value

name	LOC100040038 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040038
definition	number : 1 pseudo : _no_value

name	LOC100040075 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040075
definition	number : 1 pseudo : _no_value

name	LOC665632 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271529 GeneID:665632
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 13 Proteins product : similar to laminin receptor pseudo : _no_value transcript_id : XR_031534.1

clone name	MSMg01-080N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296C07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-163L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082B11
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-115I13.b	B6Ng01-115I13.g
ACC	DH920773	DH920774
length	1,025	1,123
definition	DH920773\|Mus musculus domesticus DNA, BAC clone: B6Ng01-115I13, 5' end.	DH920774\|Mus musculus domesticus DNA, BAC clone: B6Ng01-115I13, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcaacaaaggatttcaaatggcaggaaacacttaaaaaatgttc aacatctctggccatcagggaaatgtgatgtagaactgctttgcaattac attttacacctatcagaatgcctaagatcaaaactcaaggaactacacat ggtggcaaggatttagaacatgaggaacatttttccaccattgctggtag aagtgcaaattagtacagccattatgaaaatcaacatgatggttactcag aaaactgtaaattgttctaactcaagaaacagctataccacttttaagca tatgacccagtttatactatgtgaccactgggacatttgctcaaacctct ttattgcacctttattcataatagtcaaaatctgtaaacaacctagatgt ccctcaactgaagaatgaataaagaaaaagtggcagatttaaccaatgaa ataactacccagtgattaaaaacaatgacacccaggatccatcccataat cagcttccaaatgctgacaccattgcatacactagcaatattttgctaaa aggacccagatagagctgtctcttgtgagactatgccggggcctagcaaa cacagaaatggatgctcacagtcagctattggatggatcacagggccccc aatggaggtgctagagaaagtacccaaggagctaaaggggtctgcaatcc tataggtgaaacaacaatatgaactaaccagtaccccccggagctcatgt ctctagctacatatgaatcagaagatggcctagtcggccatcagtggaaa gagaggcccattggtcgtgcaaactttatatgcctcagtacaggggaacg ccagggtcaagaagtaggagtgggtggggtgggggagcatgtgggagact tttgggatacttggaaatgtaaatgaataaatacccaataaataataaaa ttacaatgacacccttaattgcaggaaatgattggactagatatatgatg atgtctctcatatgaagacagcagg	gaattctgtctctgccttctgagttctaaaattaaatgtgcgggtcacca cttcctggtgacatattatattttgatcttaaatgatagtattagtaaat tactagccatgtatcatggtagaggtgcatagatgtagataccttttggt tatgatcactgtgagttatattttcatagggtgagaggtatagttaaata tcatattatcaattgtatatcattgtggtttgattaagaacagcacccat aggctcatatacttgaatattaaatcataaggtagtggaactattttaga agtaatagaaggattaggaagtgtggtttcgtgagaaagtttgtcagtga gcaggaacttcaagttttcaaaaatccatgtcaggctcagtctatctctc tcctggtttaaagatcagaatgtagctcattgtttctgcttcagcaccaa gaccacgtccatgattccaccatgctctgtcatgatggccgatggcatag gaccaaacctctaaaattgtaagcaatctctccaccccaattaaatgact tcttatataaaagttgccatgatcatgatatctcatcatagcaatagaac agtgattaaaactgccataattttagtcatcagaaattagtaattatttt agaaggaaagttattttaatcatacagtgctatagctgtaggatagtgct atagttatattgagttttattttagtgtatcatattgtttatgctaatgg aatggttataatatagttatcaataacattatgatggtaatgctggtaag gctttatttttagtaggaaacttattttcagctacaattttagtgacacc gtaaaatttatacgtattttatagtgacataaaatagtaaatgcagtact gtatttatgaagtcttatttgtatttctggattatgaatagagctaaaat gttagttttagcattatagttctacagctctcatcataatttcagtacta gaattataatttacaatgatagaatatagttaaagtttatggttaaaatt gctagccataatgcccctggtggctataaaatgaaggcaagatgtgtatt gtaactggctaattattgagtta
quality values	Open. Hide. 61 47 33 36 61 61 61 38 18 61 39 43 61 61 61 61 37 36 61 61 49 49 61 61 61 61 14 13 9 10 18 12 18 18 13 13 17 50 61 59 61 59 59 59 61 59 59 59 61 59 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 44 43 49 32 35 32 30 35 44 35 44 55 59 61 61 61 61 61 59 59 61 61 61 61 61 61 55 59 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 61 61 61 61 44 55 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 61 55 55 59 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 53 61 61 61 61 61 61 53 61 61 61 61 61 61 47 39 61 61 61 61 50 61 53 61 61 61 61 61 61 61 61 53 61 61 47 61 35 61 61 50 47 53 50 53 53 53 57 57 53 57 47 47 53 40 57 53 57 57 53 39 47 45 57 50 53 47 52 57 40 57 47 53 43 52 50 53 47 53 45 53 47 47 53 38 53 53 38 57 53 50 57 57 53 35 53 53 52 52 47 47 52 52 53 53 53 53 52 53 47 26 53 41 33 33 43 50 52 52 30 53 53 45 39 52 52 52 42 42 45 41 47 53 40 45 50 38 39 53 46 46 47 52 50 52 37 16 47 53 42 45 50 57 39 52 53 50 44 42 44 50 53 31 50 28 50 42 40 39 52 53 39 42 37 8 43 48 30 52 21 52 38 18 41 36 37 27 36 33 33 53 12 41 28 44 36 44 31 37 46 22 30 57 52 29 53 35 48 30 47 11 45 37 34 37 35 40 45 34 41 29 33 35 23 23 57 32 36 33 57 29 40 39 33 29 23 13 32 45 30 30 25 30 37 30 29 24 51 46 38 33 37 19 16 30 28 25 15 6 15 5 12 9 18 24 34 33 28 34 20 4 10 36 23 28 36 46 36 13 29 46 46 25 29 36 51 51 51 33 32 14 29 29 33 35 34 35 51 28 39 10 35 21 23 51 29 23 15 15 5 10 7 17 9 11 8 19 27 43 36 29 28 27 11 7 36 24 41 29 14 14 10 10 23 15 18 8 9 8 13 11 5 17 14 16 10 7 16 6 6 6 27 36 7 5 14 16 13 6 9 6 18 19 14 6 30 30 27 23 19 20 10 9 32 7 27 10 13 16 16 31 15 12 28 35 9 6 10 19 6 7 5 10 7 8 6 8 9 8 11 9 13 26 22 9 17 7 5 3 4 16 13 6 5 4 6 15 9 12 13 12 16 5 16 13 6 6 6 4	Open. Hide. 55 61 52 49 61 14 11 11 12 18 13 13 20 14 13 36 49 59 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 59 59 61 59 61 61 61 61 61 61 45 39 52 30 30 30 30 49 59 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 55 61 61 61 61 55 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 47 61 53 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 47 47 61 61 52 61 50 61 61 61 61 61 53 61 61 61 53 61 61 61 61 61 43 61 61 52 57 53 57 57 53 57 53 57 52 57 57 53 47 53 53 57 47 40 53 57 53 47 53 53 53 57 53 57 53 57 50 47 52 57 57 57 57 47 53 47 47 53 53 53 45 57 46 45 53 57 53 53 53 53 50 53 53 50 43 57 57 50 52 45 57 47 32 57 34 57 53 47 38 52 52 48 57 57 47 45 53 53 53 42 53 50 53 37 57 39 57 57 41 41 52 53 52 53 53 57 42 45 31 57 30 19 53 52 41 52 32 52 50 50 53 42 32 53 47 42 45 52 53 53 45 45 52 57 57 50 48 37 57 36 36 45 37 38 52 21 53 44 42 42 50 52 47 52 53 33 57 36 42 33 32 37 41 32 53 38 57 38 36 52 32 46 47 13 52 32 50 34 53 37 48 48 48 35 25 26 30 40 37 36 43 40 24 40 40 29 53 53 44 37 31 48 30 52 57 21 40 57 24 37 17 36 53 53 19 29 25 8 25 13 37 53 43 26 34 57 35 29 17 16 17 28 20 5 16 29 34 34 19 9 16 22 27 57 57 27 30 36 31 38 30 24 44 29 29 32 51 51 27 28 27 20 32 28 31 19 36 30 29 21 48 51 51 22 27 51 51 30 29 17 31 13 22 28 29 51 44 28 18 7 14 29 28 34 28 37 18 29 28 51 51 13 29 29 39 31 33 46 12 21 39 25 21 31 31 33 29 25 30 12 31 27 46 32 24 27 25 29 33 28 22 38 23 9 20 26 51 27 34 13 34 33 51 28 28 18 12 10 15 7 16 7 7 23 28 29 24 28 18 28 24 26 11 25 29 31 18 12 26 11 20 35 29 29 51 51 31 34 31 35 16 34 12 7 10 21 9 13 16 17 14 14 31 12 15 26 27 34 30 34 11 15 21 15 19 17 16 17 30 25 34 23 31 13 16 31 16 9 13 29 31 24 12 8 7 5 6 26 34 17 16 19 18 28 10 12 15 13 34 17 24 30 17 5 8 5 12 8 17 28 51 21 17 8 7 14 21 15 28 24 4 7 18 39 35 29 7 9 22 9 15 10 9 23 16 26 8 18 22 5 23 6 35 35 28 15 26 35 8 16 15 22 19 7 15 6 29 32 6 8 9 10 17 10 18 6 5 5 6 20 8 10 7 17 12 31 15 20 18 7 6 4 6 9 16 5 4 7 5 5 18 7 5 6 7 6 3 7 5 10 5

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_43719777_43720893
seq2: B6Ng01-115I13.g_70_1192 (reverse)

seq1  TAACTACAATAA-TAG-CAG-TACAATACACATC-TGCCTTCA-TTTATA  45
      ||||| |||||| ||| ||| ||||||||||||| |||||||| ||||||
seq2  TAACT-CAATAATTAGCCAGTTACAATACACATCTTGCCTTCATTTTATA  49

seq1  G-CACCAGGGCCATTAT-GCTAGC-ATTTTAACCATAATACTTTAACTAT  92
      | |||||||| |||||| |||||| ||||||||||||| |||||||||||
seq2  GCCACCAGGGGCATTATGGCTAGCAATTTTAACCATAA-ACTTTAACTAT  98

seq1  AATTCTATCATTGTAAA-TATAATTCTAGTACTGAAATTATGATGAGAGC  141
       |||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  -ATTCTATCATTGTAAATTATAATTCTAGTACTGAAATTATGATGAGAGC  147

seq1  TGTAGAACTATAATGCTAAAACTAACATTTTAGCTCTATTCATAACTCCA  191
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGTAGAACTATAATGCTAAAACTAACATTTTAGCTCTATTCATAA-TCCA  196

seq1  GAAATACAAATAAGACTTCATAAATACAGTACTGCATTTACTA-TTTATG  240
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAAATACAAATAAGACTTCATAAATACAGTACTGCATTTACTATTTTATG  246

seq1  TCACTATAAAATACGTATAAATTTTACGGTGTCACTAAAATTGTAGCTGA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATAAAATACGTATAAATTTTACGGTGTCACTAAAATTGTAGCTGA  296

seq1  AAATAAGTTTCCTACTAAAAATAAAGCCTTACCAGCATTACCATCATAAT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGTTTCCTACTAAAAATAAAGCCTTACCAGCATTACCATCATAAT  346

seq1  GTTATTGATAACTATATTATAACCATTCCATTAGCATAAACAATATGATA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTGATAACTATATTATAACCATTCCATTAGCATAAACAATATGATA  396

seq1  CACTAAAATAAAACTCAATATAACTATAGCACTATCCTACAGCTATAGCA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAAATAAAACTCAATATAACTATAGCACTATCCTACAGCTATAGCA  446

seq1  CTGTATGATTAAAATAACTTTCCTTCTAAAATAATTACTAATTTCTGATG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGATTAAAATAACTTTCCTTCTAAAATAATTACTAATTTCTGATG  496

seq1  ACTAAAATTATGGCAGTTTTAATCACTGTTCTATTGCTATGATGAGATAT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAATTATGGCAGTTTTAATCACTGTTCTATTGCTATGATGAGATAT  546

seq1  CATGATCATGGCAACTTTTATATAAGAAGTCATTTAATTGGGGTGGAGAG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATCATGGCAACTTTTATATAAGAAGTCATTTAATTGGGGTGGAGAG  596

seq1  ATTGCTTACAATTTTAGAGGTTTGGTCCTATGCCATCGGCCATCATGACA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTACAATTTTAGAGGTTTGGTCCTATGCCATCGGCCATCATGACA  646

seq1  GAGCATGGTGGAATCATGGACGTGGTCTTGGTGCTGAAGCAGAAACAATG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGGTGGAATCATGGACGTGGTCTTGGTGCTGAAGCAGAAACAATG  696

seq1  AGCTACATTCTGATCTTTAAACCAGGAGAGAGATAGACTGAGCCTGACAT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACATTCTGATCTTTAAACCAGGAGAGAGATAGACTGAGCCTGACAT  746

seq1  GGATTTTTGAAAACTTGAAGTTCCTGCTCACTGACAAACTTTCTCACGAA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTTGAAAACTTGAAGTTCCTGCTCACTGACAAACTTTCTCACGAA  796

seq1  ACCACACTTCCTAATCCTTCTATTACTTCTAAAATAGTTCCACTACCTTA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACACTTCCTAATCCTTCTATTACTTCTAAAATAGTTCCACTACCTTA  846

seq1  TGATTTAATATTCAAGTATATGAGCCTATGGGTGCTGTTCTTAATCAAAC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAATATTCAAGTATATGAGCCTATGGGTGCTGTTCTTAATCAAAC  896

seq1  CACAATGATATACAATTGATAATATGATATTTAACTATACCTCTCACCCT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGATATACAATTGATAATATGATATTTAACTATACCTCTCACCCT  946

seq1  ATGAAAATATAACTCACAGTGATCATAACCAAAAGGTATCTACATCTATG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATATAACTCACAGTGATCATAACCAAAAGGTATCTACATCTATG  996

seq1  CACCTCTACCATGATACATGGCTAGTAATTTACTAATACTATCATTTAAG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCTACCATGATACATGGCTAGTAATTTACTAATACTATCATTTAAG  1046

seq1  ATCAAAATATAATATGTCACCAGGAAGTGGTGACCCGCACATTTAATTTT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATATAATATGTCACCAGGAAGTGGTGACCCGCACATTTAATTTT  1096

seq1  AGAACTCAGAAGGCAGAGACAGAATTC  1117
      |||||||||||||||||||||||||||
seq2  AGAACTCAGAAGGCAGAGACAGAATTC  1123

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Alignment Information