BAC Information

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BAC

Clone NameB6Ng01-116G15
ChromosomeX (Build37)
Map Location 88,709,026 - 88,710,134
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC629471, LOC100041815, Gm44, LOC670074, LOC667972, LOC667976, Mageb2, EG278167
Downstream geneEG667988, EG667993, EG385489, 1700084M14Rik, EG236891, LOC629542, Mageb5, LOC673766, LOC633484, LOC674396, EG278087, Mageb1, EG236892, EG236893, Mageb18, EG436259, EG668061
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116G15.bB6Ng01-116G15.g
ACCDH921418DH921419
length1,1581,081
definitionDH921418|Mus musculus domesticus DNA, BAC clone: B6Ng01-116G15, 5' end.DH921419|Mus musculus domesticus DNA, BAC clone: B6Ng01-116G15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcataaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaagatccagcaatacctcttctgggc
atatatccagaagatgccccaaccggtaagaaggacatatgctccactat
gttcatagcagccttatttataatagccagatgctggaaagaacccagat
gccccccaacagaggaatggatacagaaaatatggtacatttacacaatg
gaatactactcagctattaaaaaaatgaatttatgaaattcctaggcaaa
tggatggacctggaggacatcatcctgagtgaggtaacccaaatacaaag
gaactcgcacaatatgtactcactgataagtggatattagcccagaaact
taggatacccaagatataagatacaatttgctaaacacatgaaattcaag
aagaacgaagaccaaagtgtggacactttgccccttcttagaaatgggaa
ctaaacacccactgaaggagttacagagacaaaatttggagctgtgacga
aaggatggaccatctagtgattgccatatgcaggggatccatcccataat
cagctcccaaacgctgacaccattgcatacactagcaagattttgctgaa
agggcccagatatagctgtctcttgtgagactatgccggggcctagcaaa
cacagaagtggatgatcacagtcagctattggatgggtcacacggccccc
aatggaggagctagagaaattacccaggagctaaagggactgcaccctat
atgtgaacaacatatgactaccatactccggagctcttgactctagctgc
atatgtatcaaagatggcttatcgcatcactgcaagaagagtcattcgac
ttgcaactgttatgccagttacagggatctaggcctaacggggggagtgg
tggggtat
gaattctttgccatgactaattttagttaatattttttcagtataaaagc
agtaagaattattatggcatattgaggaaataacccctgtatcattatat
tatgcaccttgtttacaataactttctttgatctaggatctgctaagatc
atacatatgactactggcacaattctagcaagacgaatacaggtgctatg
ttttcccatacctttattttcaatatactcctatcgtcatatttaaaata
aattcttatagccaacatacaatttagctttgtctaatattttctgttac
ttctcaaatctcagttggcatatttagagcatcactgacatttaaggttt
tattttctctttcaagtgtttaataatcactttcatacattttagttatt
cttaaaatataagcatatttgaacaaggggttgtcttataaatctactga
gaatagagagcaaaagatctttttttttttttaaccttcattcattctgt
agtactagtcctttgtgtagatctgaggtttcgacttccacaattcttat
tcacaaaaggaaaccttttacattattccaaggattttgatgaaaaaaaa
ttgactttattttcagtgagtcctttgttctttgtttagaaataattttt
ttgctggtcatgggtctgtagattgttttgttcttatttctttttaatgt
gttgtgtctcttactttattctgtcatatctctgtttacattacccattt
aatttacttattatctacctttaccattatggcccttagcatatccatca
aaggtactttacttccgtttggtattagttcttagttttttgcttcaatc
tcttttgtctcctagatgcttggtatattgatatatgtcttaatagtaac
taagttaattagtgattagtgtgcagtatagaatcttctacttaaggctg
tttactgaactgtagatgatagagcttaagcctttgctgatgttattaga
tgatgctcctatttcttagactgcgtcttcctagtgtttattgattgaga
acaccttgagtgtaaagtggtgaggtgagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_88709026_88710134
seq2: B6Ng01-116G15.g_67_1147 (reverse)

seq1  TCCTCACCTCA-CACTTTTCTAACACATCAAGGGTGGTTCTCAATTCAAC  49
      ||||||||||| ||||||    |||| ||||||   |||||||| |||| 
seq2  TCCTCACCTCACCACTTT----ACAC-TCAAGG--TGTTCTCAA-TCAAT  42

seq1  ATAACAACACTATGGAAAGAACGGCACGTCTAAGAAATAGGGAGCATACA  99
      |    |||||||  | ||||   ||| |||||||||||| ||||||| ||
seq2  A----AACACTA--GGAAGA--CGCA-GTCTAAGAAATA-GGAGCAT-CA  81

seq1  TCTAATAACATCAGCAAAGGCTTAAGCCTCTATCATCTACAGTTTCAGTA  149
      |||||||||||||||||||||||||| ||||||||||||||| |||||||
seq2  TCTAATAACATCAGCAAAGGCTTAAG-CTCTATCATCTACAG-TTCAGTA  129

seq1  AACAGCCTTTTAAGTATGAAGATTCTAATACTGCACACTAATCACCTAAT  199
      |||||||  ||||||| ||||||||| ||||||||||||||||| |||||
seq2  AACAGCC--TTAAGTA-GAAGATTCT-ATACTGCACACTAATCA-CTAAT  174

seq1  TAACTTAGTTACTATTAAGACATTATATACAATATAACAAAGCATACTAG  249
      |||||||||||||||||||||| ||||| |||||| || |||||| ||||
seq2  TAACTTAGTTACTATTAAGACA-TATAT-CAATAT-ACCAAGCAT-CTAG  220

seq1  GAGACAAAAGAGATTGAAGCAAAAAACTAAGAACTAATACCAAACGGAAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAAAAGAGATTGAAGCAAAAAACTAAGAACTAATACCAAACGGAAG  270

seq1  TAAAGTACCTTTGATGGATATGCTAAGGGCCATAATGGTAAAGGTAGATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTACCTTTGATGGATATGCTAAGGGCCATAATGGTAAAGGTAGATA  320

seq1  ATAAGTAAATTAAATGGGTAATGTAAACAGAGATATGACAGAATAAAGTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTAAATTAAATGGGTAATGTAAACAGAGATATGACAGAATAAAGTA  370

seq1  AGAGACACAACACATTAAAAAGAAATAAGAAC-AAACAATCTACAGACCC  448
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGAGACACAACACATTAAAAAGAAATAAGAACAAAACAATCTACAGACCC  420

seq1  ATGACCAGCAAAAAAATTATTTCTAAACAAAGAACAAAGGACTCACTGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCAGCAAAAAAATTATTTCTAAACAAAGAACAAAGGACTCACTGAA  470

seq1  AATAAAGTCAATTTTTTTTCATCAAAATCCTTGGAATAATGTAAAAGGTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGTCAATTTTTTTTCATCAAAATCCTTGGAATAATGTAAAAGGTT  520

seq1  TCCTTTTGTGAATAAGAATTGTGGAAGTCGAAACCTCAGATCTACACAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTGTGAATAAGAATTGTGGAAGTCGAAACCTCAGATCTACACAAA  570

seq1  GGACTAGTACTACAGAATGAATGAAGGTTAAAAAAAAAAAAAGATCTTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTAGTACTACAGAATGAATGAAGGTTAAAAAAAAAAAAAGATCTTTT  620

seq1  GCTCTCTATTCTCAGTAGATTTATAAGACAACCCCTTGTTCAAATATGCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTATTCTCAGTAGATTTATAAGACAACCCCTTGTTCAAATATGCT  670

seq1  TATATTTTAAGAATAACTAAAATGTATGAAAGTGATTATTAAACACTTGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTAAGAATAACTAAAATGTATGAAAGTGATTATTAAACACTTGA  720

seq1  AAGAGAAAATAAAACCTTAAATGTCAGTGATGCTCTAAATATGCCAACTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAAATAAAACCTTAAATGTCAGTGATGCTCTAAATATGCCAACTG  770

seq1  AGATTTGAGAAGTAACAGAAAATATTAGACAAAGCTAAATTGTATGTTGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGAGAAGTAACAGAAAATATTAGACAAAGCTAAATTGTATGTTGG  820

seq1  CTATAAGAATTTATTTTAAATATGACGATAGGAGTATATTGAAAATAAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAGAATTTATTTTAAATATGACGATAGGAGTATATTGAAAATAAAG  870

seq1  GTATGGGAAAACATAGCACCTGTATTCGTCTTGCTAGAATTGTGCCAGTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGGAAAACATAGCACCTGTATTCGTCTTGCTAGAATTGTGCCAGTA  920

seq1  GTCATATGTATGATCTTAGCAGATCCTAGATCAAAGAAAGTTATTGTAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATGTATGATCTTAGCAGATCCTAGATCAAAGAAAGTTATTGTAAA  970

seq1  CAAGGTGCATAATATAATGATACAGGGGTTATTTCCTCAATATGCCATAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTGCATAATATAATGATACAGGGGTTATTTCCTCAATATGCCATAA  1020

seq1  TAATTCTTACTGCTTTTATACTGAAAAAATATTAACTAAAATTAGTCATG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTTACTGCTTTTATACTGAAAAAATATTAACTAAAATTAGTCATG  1070

seq1  GAAAAGAATTC  1109
      | |||||||||
seq2  GCAAAGAATTC  1081