BAC Information

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BAC

Clone NameB6Ng01-117A07
ChromosomeX (Build37)
Map Location 106,744,108 - 106,894,153
singlet/doubletdoublet
Overlap genenone
Upstream geneGm379, Brwd3, 5730416F02Rik, Nsbp1, Sh3bgrl, EG622976, LOC100042831, LOC213474
Downstream geneLOC245573, EG634340, LOC668530
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117A07.bB6Ng01-117A07.g
ACCDH921867DH921868
length1,196827
definitionDH921867|Mus musculus domesticus DNA, BAC clone: B6Ng01-117A07, 5' end.DH921868|Mus musculus domesticus DNA, BAC clone: B6Ng01-117A07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,892,938 - 106,894,153)(106,744,108 - 106,744,933)
sequence
gaattcagtgacataacaatgtatataaatggcagtaaccgtggctggaa
aaatggctcagcagttaagaccatgttctattctgccagaggatctaagt
tttgtttctaacaccgatgtcaggctgctcacaacagcctataactccag
ttccatgggatctaactggatccatataactttgaatgtgctaattttat
gttacacactattttgagaatgtttctcttttctttttgtaagatctata
ggcctattcaagcacttctatgcttttatactcatttttttattaggata
gctgctagaaatttgacaagttctcaagtctcccctgcagcactctgtct
gtcaaagctctgatggtcaaataattaacatattgtaatcaaactctgta
tgtaggttttgaagaatttcaaaggaaatctagaaaagaagaaatgaagg
ctttcattttgtttcttaaagcaactttagctctgcggacatttacaaag
tattacagtctaccatctgtaagtgttacagctgtgtcttaaaattttta
gtttttatttgagcagtcactaagagattgagttttataatttgcaggtg
gctatactacagtggttcatttatcctatgatacacataataacatgttg
atatgcaaatacattctctttataaatgtatatatgcatgtatgcatgta
tatatacatgcatgtaattaggaagatagccttacaatgtttgctggatc
tcttttactcttaacaatgtggatacagttttggcttctcagcttttctg
cttttcataacttatttggactttttaaatttgctaattgaggacagcct
agggttatattttgtgagctacaaattccataacaatatgtcaatgacaa
aggataaaggcacgttttgaggacatctgttgctcacagttagctgatgc
tcggtgcagaggaaagatggaactgggccacaggtgctggagtcatttta
ctccagatatttacctatctttccacttcactagcatcatctgactttta
cttctacttggtgagcagcaacaaccaaagacaacaaataaacaacatta
aaagcttggatttgtttttggattctggaaagtctgttcttgctaaactt
tcctttgggttcctcagactctttatttgttgcttggactctttca
gaattcttgtcccaagagaaactgtatacttacttacttgcaaagacatt
tacttcctgtcatctattctcaagtatgaactgtaatgcttatattttaa
tgtaatgaggtaaggaaaagcttaagatatcttgcttctgagctgattgt
gagtaaacagacaaaagttatcccagctctgttcatgtagtgtataccca
aagattacccttgacactttatatactggcaatgtagtttcctcttttcc
ctaactatgataagcaacaacacaattaccatgtagaagaaaaagaaaat
gttctttaattcactattgaattcaagccatgaatacattttctaccaga
tttatgaatagcaaacttgttttatttgtacaatgcttgtaaaaagtatt
ggttataaactaattttttgtttgcttttttgttttttgttttgtttttg
tttggcttttttgttttgttttgttttgctttgttttttggttttttctt
ttcttttttttttctttttttttttttttggtttttcaagacagggtttc
tctgtgtagccctggttgtcctggaactcactttgtagaccaggctggcc
tcgaactcagaaatctgcctgcctctgcctcccaagtgctgggattaaag
gcatgtgccaccacgccgggctataaattaaattttaaataaatgcataa
ctattattcaaatacgtagagtaatatgttttgataaacacatggattgt
gttctttcaaaatcagtctaaaatatccgtcttcttagaaagggtatgga
tttggataggaagtaggggaggatctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_106892938_106894153
seq2: B6Ng01-117A07.b_48_1243 (reverse)

seq1  TGAAAGAGTCCAAAGGCAAACAATAAAGAAATGCTTGAGGCACACCAAAA  50
      |||||||||||||  ||||  ||||||||   |  ||||| || ||||| 
seq2  TGAAAGAGTCCAA--GCAACAAATAAAGA---GTCTGAGGAAC-CCAAA-  43

seq1  GGAAAAGTCTAGCAAGATCAGACTTTTTCAAGAATCCAAAACAAAATCCA  100
       | ||||| |||||||| |||||  |||| |||||||||||  |||||||
seq2  -GGAAAGTTTAGCAAGAACAGAC--TTTCCAGAATCCAAAAACAAATCCA  90

seq1  AGCCTTTTAATTGTTTGTTTTATTTGTTTGTCTTTTGTTTGTTTGCTTGC  150
      || ||||||| ||||   |||||||| |||||||| |||   |||| |||
seq2  AG-CTTTTAA-TGTT--GTTTATTTG-TTGTCTTTGGTT--GTTGC-TGC  132

seq1  TTCACCAAGTAGAGGTAAAAGTCAGATGATGCTAGTGAAGTGGAAAGATA  200
       |||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  -TCACCAAGTAGAAGTAAAAGTCAGATGATGCTAGTGAAGTGGAAAGATA  181

seq1  GGTAAATATCTGGAGTAAAATGACTCCAGCACCTGTTGGCCAGTTCCATC  250
      |||||||||||||||||||||||||||||||||||| | |||||||||||
seq2  GGTAAATATCTGGAGTAAAATGACTCCAGCACCTGTGGCCCAGTTCCATC  231

seq1  TTTCCTCTGCACCGAGCATCAGCTAACTGTGAGCAACAGATGTCCTCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTGCACCGAGCATCAGCTAACTGTGAGCAACAGATGTCCTCAAA  281

seq1  ACGTGCCTTTATTCCTTTGTCATTGACATATTGTTATGGAATTTGTAGCT  350
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACGTGCCTTTA-TCCTTTGTCATTGACATATTGTTATGGAATTTGTAGCT  330

seq1  CACAAAATATAACCCTAGGCTGTCCTCAATTAGCAAATTTAAAAAGTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAATATAACCCTAGGCTGTCCTCAATTAGCAAATTTAAAAAGTCCA  380

seq1  AATAAGTTATGAAAAGCAGAAAAGCTGAGAAGCCAAAACTGTATCCACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTTATGAAAAGCAGAAAAGCTGAGAAGCCAAAACTGTATCCACAT  430

seq1  TGTTAAGAGTAAAAGAGATCCAGCAAACATTGTAAGGCTATCTTCCTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGAGTAAAAGAGATCCAGCAAACATTGTAAGGCTATCTTCCTAAT  480

seq1  TACATGCATGTATATATACATGCATACATGCATATATACATTTATAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGCATGTATATATACATGCATACATGCATATATACATTTATAAAGA  530

seq1  GAATGTATTTGCATATCAACATGTTATTATGTGTATCATAGGATAAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTATTTGCATATCAACATGTTATTATGTGTATCATAGGATAAATGA  580

seq1  ACCACTGTAGTATAGCCACCTGCAAATTATAAAACTCAATCTCTTAGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGTAGTATAGCCACCTGCAAATTATAAAACTCAATCTCTTAGTGA  630

seq1  CTGCTCAAATAAAAACTAAAAATTTTAAGACACAGCTGTAACACTTACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCAAATAAAAACTAAAAATTTTAAGACACAGCTGTAACACTTACAG  680

seq1  ATGGTAGACTGTAATACTTTGTAAATGTCCGCAGAGCTAAAGTTGCTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGACTGTAATACTTTGTAAATGTCCGCAGAGCTAAAGTTGCTTTA  730

seq1  AGAAACAAAATGAAAGCCTTCATTTCTTCTTTTCTAGATTTCCTTTGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAAAATGAAAGCCTTCATTTCTTCTTTTCTAGATTTCCTTTGAAA  780

seq1  TTCTTCAAAACCTACATACAGAGTTTGATTACAATATGTTAATTATTTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAAAACCTACATACAGAGTTTGATTACAATATGTTAATTATTTGA  830

seq1  CCATCAGAGCTTTGACAGACAGAGTGCTGCAGGGGAGACTTGAGAACTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGAGCTTTGACAGACAGAGTGCTGCAGGGGAGACTTGAGAACTTG  880

seq1  TCAAATTTCTAGCAGCTATCCTAATAAAAAAATGAGTATAAAAGCATAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTTCTAGCAGCTATCCTAATAAAAAAATGAGTATAAAAGCATAGA  930

seq1  AGTGCTTGAATAGGCCTATAGATCTTACAAAAAGAAAAGAGAAACATTCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTGAATAGGCCTATAGATCTTACAAAAAGAAAAGAGAAACATTCT  980

seq1  CAAAATAGTGTGTAACATAAAATTAGCACATTCAAAGTTATATGGATCCA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAGTGTGTAACATAAAATTAGCACATTCAAAGTTATATGGATCCA  1030

seq1  GTTAGATCCCATGGAACTGGAGTTATAGGCTGTTGTGAGCAGCCTGACAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGATCCCATGGAACTGGAGTTATAGGCTGTTGTGAGCAGCCTGACAT  1080

seq1  CGGTGTTAGAAACAAAACTTAGATCCTCTGGCAGAATAGAACATGGTCTT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGTTAGAAACAAAACTTAGATCCTCTGGCAGAATAGAACATGGTCTT  1130

seq1  AACTGCTGAGCCATTTTTCCAGCCACGGTTACTGCCATTTATATACATTG  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTGAGCCATTTTTCCAGCCACGGTTACTGCCATTTATATACATTG  1180

seq1  TTATGTCACTGAATTC  1216
      ||||||||||||||||
seq2  TTATGTCACTGAATTC  1196

seq1: chrX_106744108_106744933
seq2: B6Ng01-117A07.g_66_892

seq1  GAATTCTTGTCCCAAGAGAAACTGTATACTTACTTACTTGCAAAGACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTCCCAAGAGAAACTGTATACTTACTTACTTGCAAAGACATT  50

seq1  TACTTCCTGTCATCTATTCTCAAGTATGAACTGTAATGCTTATATTTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCTGTCATCTATTCTCAAGTATGAACTGTAATGCTTATATTTTAA  100

seq1  TGTAATGAGGTAAGGAAAAGCTTAAGATATCTTGCTTCTGAGCTGATTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGAGGTAAGGAAAAGCTTAAGATATCTTGCTTCTGAGCTGATTGT  150

seq1  GAGTAAACAGACAAAAGTTATCCCAGCTCTGTTCATGTAGTGTATACCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAACAGACAAAAGTTATCCCAGCTCTGTTCATGTAGTGTATACCCA  200

seq1  AAGATTACCCTTGACACTTTATATACTGGCAATGTAGTTTCCTCTTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTACCCTTGACACTTTATATACTGGCAATGTAGTTTCCTCTTTTCC  250

seq1  CTAACTATGATAAGCAACAACACAATTACCATGTAGAAGAAAAAGAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTATGATAAGCAACAACACAATTACCATGTAGAAGAAAAAGAAAAT  300

seq1  GTTCTTTAATTCACTATTGAATTCAAGCCATGAATACATTTTCTACCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTAATTCACTATTGAATTCAAGCCATGAATACATTTTCTACCAGA  350

seq1  TTTATGAATAGCAAACTTGTTTTATTTGTACAATGCTTGTAAAAAGTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAATAGCAAACTTGTTTTATTTGTACAATGCTTGTAAAAAGTATT  400

seq1  GGTTATAAACTAATTTTTTGTTTGCTTTTTTGTTTTTTGTTTTGTTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATAAACTAATTTTTTGTTTGCTTTTTTGTTTTTTGTTTTGTTTTTG  450

seq1  TTTGGCTTTTTTGTTTTGTTTTGTTTTGCTTTGTTTTTTGGTTTTTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTTTTTTGTTTTGTTTTGTTTTGCTTTGTTTTTTGGTTTTTTCTT  500

seq1  TTCTTTTTTTTTTCTTTTTTTTTTTTTTTGGTTTTTCAAGACAGGGTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTTTTCTTTTTTTTTTTTTTTGGTTTTTCAAGACAGGGTTTC  550

seq1  TCTGTGTAGCCCTGGTTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTAGCCCTGGTTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCC  600

seq1  TCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAG  650

seq1  GCATGTGCCACCACGCCGGGCTATAAATTAAATTTTAAATAAATGCATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGCCACCACGCCGGGCTATAAATTAAATTTTAAATAAATGCATAA  700

seq1  CTATTATTCAAATACGTAGAGTAATATGTTTTGATAAACACATGGATTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATTCAAATACGTAGAGTAATATGTTTTGATAAACACATGGATTGT  750

seq1  GTTCTTTCAAAATCAGTCTAAAATATCCGTCTTCTTAGAAAGGGTATGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTCAAAATCAGTCTAAAATATCCGTCTTCTTAGAAAGGGTATGGA  800

seq1  TTTGGATAGGAAGTA-GGGAGGATCTT  826
      ||||||||||||||| |||||||||||
seq2  TTTGGATAGGAAGTAGGGGAGGATCTT  827