BAC Information

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BAC

Clone NameB6Ng01-118I16
ChromosomeX (Build37)
Map Location 91,924,822 - 92,079,653
singlet/doubletdoublet
Overlap geneLOC385500, Zxdb, LOC631331, EG631319, Zxda
Upstream genePcyt1b, Pdk3, EG668103, LOC100042041, AU015836, EG245516, LOC100042062, EG629591, Zfx, Eif2s3x, Klhl15, LOC385495, LOC670263, LOC100042098, LOC631145, 0610008C08Rik, EG668148, Maged1, LOC668150, EG385499, EG668156, Gspt2
Downstream geneGm371, 9630042H07Rik, Arhgef9, LOC619688, LOC100042189, 2810002O09Rik, Asb12, LOC668202, AK129302, A130028J20Rik, 1700010D01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118I16.bB6Ng01-118I16.g
ACCDH922993DH922994
length1,089371
definitionDH922993|Mus musculus domesticus DNA, BAC clone: B6Ng01-118I16, 5' end.DH922994|Mus musculus domesticus DNA, BAC clone: B6Ng01-118I16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,924,822 - 91,925,709)(92,079,277 - 92,079,653)
sequence
gaattccaagtataggatatggggctgccatagcagctgactccgacttg
cctcaatgtgtaggagtgtcatgattttgccaactgcagatagtttctgc
aattgtgtgacatttggaattctggggccttttcagagggtatatgagtg
ctagagccccaataggtggattgttggtgaattgctgtttgagtgttggt
tgttggtcatggtttgttaagtagtcatgcataaagatgaaacaagaaga
agaaattagggctggtgagatggctcagtgggtaagagcacccgactgct
cttccaaaggtcagaagttcaaatcccagcaaccacatggtggctcacaa
ccatccgtaacgggatctgactccctcttctggagtgtctgaagacagct
acagtgtacttacatataatgaataaataaatctttaaaaaaaaaaaaga
agaagaaattaggtatactgaagatcaaatgtccccccaccccaccaagg
atattgatgcccctaatcagcagcaggacttagtctagctataatgctcc
atttctactcctggctctgtctagggatcagtttcatgtcccctccatta
cattctctctcttatccagcgttaggagattgaaagtgtagaagaaaagg
ggtagaaaagggtagaagaagaagaagcacccacaaagtgtcaaaagacc
aactacagaatgcagtgctataatgtgcaacatctcaagggtgttgagac
actcagaagatcaggaaacacttgaatccctccattccctgaagttgaca
actttattttctgctgggaacagacagacttcactctcaccactcactgt
ctttagcctttgaagcagctgaagtgaggaaagaaagagaggcaagccta
aaggagtatatagagaaaggacagtgagtgtcttgacactgagagcaagt
gacagagtcagcagggaggtgccagtatgcaagtatgcttcagtcagtca
gatttgaactgtcagagtagagtcaacacagctgtgaaagttgggacaaa
tactctgaccccactactgaaaccattcttgtagaaaca
ctcatcaagtgtcctttcacatgcttgctttagcagaacatacgttcacc
tgtgcctgctttggcaaacacttccttcacggatgtgtctgcttcagtga
aaacttccatcacatacagcatccaacacaactgactcccagagcactgg
taaatttccacttgaggtaaatgtagctatcactcctcaatgaagctcct
tcctgcagtactcaaatcacaatagaatgttcaggttttcaaatctcaga
gaacaactgaccctgtggtatccaccccaaattgatacacctacaataca
accctaaacctaaatctcaggaatgttacaatagttttagtgtgttcctg
gtgggaggtgggggggtaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_91924822_91925709
seq2: B6Ng01-118I16.b_255_1133

seq1  GGTTTGTTAAGTAGTCATGCATAAAGATGAAACAAGAAGAAGAAATTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGTTAAGTAGTCATGCATAAAGATGAAACAAGAAGAAGAAATTAGG  50

seq1  GCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGG  100

seq1  TCAGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAA  150

seq1  CGGGATCTGACTCCCTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGATCTGACTCCCTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACT  200

seq1  TACATATAATGAATAAATAAATCTTT-AAAAAAAAAAAGAAGAAGAAATT  249
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TACATATAATGAATAAATAAATCTTTAAAAAAAAAAAAGAAGAAGAAATT  250

seq1  AGGTATACTGAAGATCAAATGTCCCCCCACCCCACCAAGGATATTGATGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATACTGAAGATCAAATGTCCCCCCACCCCACCAAGGATATTGATGC  300

seq1  CCCTAATCAGCAGCAGGACTTAGTCTAGCTATAATGCTCCATTTCTACTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAATCAGCAGCAGGACTTAGTCTAGCTATAATGCTCCATTTCTACTC  350

seq1  CTGGCTCTGTCTAGGGATCAGTTTCATGTCCCCTCCATTACATTCTCTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCTGTCTAGGGATCAGTTTCATGTCCCCTCCATTACATTCTCTCT  400

seq1  CTTATCCAGCGTTAGGAGATTGAACGTGTAGAAGAAAAGGGGTAGAAAAG  449
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTTATCCAGCGTTAGGAGATTGAAAGTGTAGAAGAAAAGGGGTAGAAAAG  450

seq1  GGTAGAAGAAGAAGAAGCACCCACAAAGTGTCAAAAGACCAACTACAGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAAGAAGAAGAAGCACCCACAAAGTGTCAAAAGACCAACTACAGAA  500

seq1  TGCAGTGCTATAATGTGCAACATCTCAAGGGTGTTGAGACACTCAGAAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTGCTATAATGTGCAACATCTCAAGGGTGTTGAGACACTCAGAAGA  550

seq1  TCAGGAAACACTTGAATCCCTCCATTCCCTGAAGTTGACAACTTTATTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAACACTTGAATCCCTCCATTCCCTGAAGTTGACAACTTTATTTT  600

seq1  CTGCTGGGAACAGACAGACTTCACTCTCACCACTCACTGTCTTTAGCCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGGAACAGACAGACTTCACTCTCACCACTCACTGTCTTTAGCCTT  650

seq1  TGAAGCAGCTGAAGTGAGGAAAGAAAGAGAGGCAAGCCTAAAGGAGTATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAGCTGAAGTGAGGAAAGAAAGAGAGGCAAGCCTAAAGGAGTATA  700

seq1  TAGAGAAAGGACAGTGAGTGTC-TGACACTGAGAGCAGGTGACAGAGTCA  748
      |||||||||||||||||||||| |||||||||||||| ||||||||||||
seq2  TAGAGAAAGGACAGTGAGTGTCTTGACACTGAGAGCAAGTGACAGAGTCA  750

seq1  GCAGGGAGGTGCCAGTATGCAAAGTATGCTCAAGTCAGTCAGATTTGAAC  798
      |||||||||||||||||||| |||||||||  ||||||||||||||||||
seq2  GCAGGGAGGTGCCAGTATGC-AAGTATGCTTCAGTCAGTCAGATTTGAAC  799

seq1  TGGCCAGAAGTAGGAGTCAAACACAGCTGTGAAAGTTTGGGACCACATAC  848
      | | ||| |||| ||||| |||||||||||||||| |||||| || ||||
seq2  T-GTCAG-AGTA-GAGTC-AACACAGCTGTGAAAG-TTGGGA-CAAATAC  843

seq1  TCTGGACCCCCACTACTGAGACCATTTCTTTGTAGAAACA  888
      ||||   |||||||||||| ||||||   |||||||||||
seq2  TCTG--ACCCCACTACTGAAACCATT--CTTGTAGAAACA  879

seq1: chrX_92079277_92079653
seq2: B6Ng01-118I16.g_66_442 (reverse)

seq1  CCTTACCCCCCCACCTCCCACCAGGAACACACTAAAACTATTGTAACATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACCCCCCCACCTCCCACCAGGAACACACTAAAACTATTGTAACATT  50

seq1  CCTGAGATTTAGGTTTAGGGTTGTATTGTAGGTGTATCAATTTGGGGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGATTTAGGTTTAGGGTTGTATTGTAGGTGTATCAATTTGGGGTGG  100

seq1  ATACCACAGGGTCAGTTGTTCTCTGAGATTTGAAAACCTGAACATTCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCACAGGGTCAGTTGTTCTCTGAGATTTGAAAACCTGAACATTCTAT  150

seq1  TGTGATTTGAGTACTGCAGGAAGGAGCTTCATTGAGGAGTGATAGCTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTTGAGTACTGCAGGAAGGAGCTTCATTGAGGAGTGATAGCTACA  200

seq1  TTTACCTCAAGTGGAAATTTACCAGTGCTCTGGGAGTCAGTTGTGTTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTCAAGTGGAAATTTACCAGTGCTCTGGGAGTCAGTTGTGTTGGA  250

seq1  TGCTGTATGTGATGGAAGTTTTCACTGAAGCAGACACATTCGTGAAGGAA  300
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGCTGTATGTGATGGAAGTTTTCACTGAAGCAGACACATCCGTGAAGGAA  300

seq1  GTGTTCGCCAAAGCAGGCACAGGTGAACGTATGTTCTGCTAAAGCAAGCA  350
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGCCAAAGCAGGCACAGGTGAACGTATGTTCTGCTAAAGCAAGCA  350

seq1  TGTGAAAGGACACTTGATGAGGAATTC  377
      |||||||||||||||||||||||||||
seq2  TGTGAAAGGACACTTGATGAGGAATTC  377