BAC Information

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BAC

Clone NameB6Ng01-120P08
ChromosomeX (Build37)
Map Location 62,495,668 - 62,634,429
singlet/doubletdoublet
Overlap genenone
Upstream geneSlitrk4, LOC100040011, Ctag2
Downstream geneLOC671840
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120P08.bB6Ng01-120P08.g
ACCDH924765DH924766
length9521,119
definitionDH924765|Mus musculus domesticus DNA, BAC clone: B6Ng01-120P08, 5' end.DH924766|Mus musculus domesticus DNA, BAC clone: B6Ng01-120P08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,633,866 - 62,634,429)(62,495,668 - 62,496,797)
sequence
gaattcaaattagttggtataaagcgttctttcaaatatattgactgttt
gaaaatagaaatcccaaacttcctgaaagaccaaaagaatcatatagaat
aacttataagctctgaaaaatatacttgtccctacatatttgtatgtgat
ttaaagcaatataaattgagcttcctctgtgtcagcttttaattacttaa
ttccaaaggtctgaagtagcactctttttttttcttcttcctgattccaa
aactcacagtaaacaaggctttctactcataaatcaatcatgttccatct
ctgctgttgtcagaacttccggtttccttagagcttgttcttgctcttag
aaattctgaactcatgcaagtcgttggtgttagaaatctccatctgaata
ggcactaaaagcttcaatattacctactgcatgaaacagaaatcctcaca
gtgtctaccctaatttctcatgcacaaagggttccctagtctataaaaga
aaacatagcccttctggttggtgtcagtactgggtcaccttgggcatgga
attggctgacacccccacggtccctagaggacactccactcgatcttagg
atcactggtgagtggaacacaacatctgttccaatccaatctcaggggac
ctgagacagcagttgggaagcagaaaaccgaccagaccagaggaacaagt
cccttctggttggtaccagcactggtcaccttgggtgcagattcagcaga
cacacctagtccccagaggactctccacactatcttggaatcactgacca
gacagatttatggtcctcaaaggtgacaccatatccaggcactgtaacat
acccaggatcttaggacaacaggatcccaagataacaggagctgggtcag
accagtatttcaggtctcagaggaagcttgactgccaaaactctgacaca
cc
gaattctgtagtgagcgaaatccctaccattaatttagaaaaatattgat
tcaaatatattttctaataaggcaaatgccagaagcttataaaaagaaat
agtaaagaaaggaataaaatctagtagttaaattatattgaaataaagtg
taataaagctcatggtcctaagttctataagaaggcagtctgaaaaagcc
atgggaaacaaaccagtaaatagcatcccttcatgaactctgcctcagct
cctgcctacaagttcctgccctgtgagagttcctgtcctgacttccttta
gtaattgactatgatgtggaagtgtaacttaaataaacccttaattctca
cccctaagatagctttgcatagactcagttaaaaacagaagcaatttact
tttggtctttttaaaacagagtttgataaataaagttattaatttaaaca
tttattcataagaatattcacaacacaaccatttcctttttatttttgtt
tatatttaatatgcattgtattttataatgagaacataattttttatgtt
gcagatagaaaaaaatcatgaaattaatctattaaattgaacaacattcc
attatttaaataatagtatttaacaagtactttcttttttaaaaatattg
atccagcacaccaaacagacctaggttttagaggcaattcccctaggatt
ttttttaagtctgctatattattaaagattttctccctttcatccaaaac
gtattcttttctcatacattttctctataaaggagaaatattatttgctc
aaaatctaagatcatttgttttacttagtacggatgtatattttcatttt
gcctatcaaacaatattacctctttatatagctacatataaattaatgat
tttcttggagggcagagttacagatgattacttattttctgcacatttca
aatttctaggatatatcactaacgtgtcaaatatacaaatttattctttt
gaatatggcaggaaaaaacagtcaaacaataaaatactgcacacacgcca
tacatacaggagctattttgtgctgagaccagatccatcatactcgatat
caacgaagaattttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_62633866_62634429
seq2: B6Ng01-120P08.b_47_610 (reverse)

seq1  GGGTGTCAGCCAATTCCATGCCCAAGGTGACCCAGTACTGACACCAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTCAGCCAATTCCATGCCCAAGGTGACCCAGTACTGACACCAACCA  50

seq1  GAAGGGCTATGTTTTCTTTTATAGACTAGGGAACCCTTTGTGCATGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGCTATGTTTTCTTTTATAGACTAGGGAACCCTTTGTGCATGAGAA  100

seq1  ATTAGGGTAGACACTGTGAGGATTTCTGTTTCATGCAGTAGGTAATATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGGTAGACACTGTGAGGATTTCTGTTTCATGCAGTAGGTAATATTG  150

seq1  AAGCTTTTAGTGCCTATTCAGATGGAGATTTCTAACACCAACGACTTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTTAGTGCCTATTCAGATGGAGATTTCTAACACCAACGACTTGCA  200

seq1  TGAGTTCAGAATTTCTAAGAGCAAGAACAAGCTCTAAGGAAACCGGAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCAGAATTTCTAAGAGCAAGAACAAGCTCTAAGGAAACCGGAAGT  250

seq1  TCTGACAACAGCAGAGATGGAACATGATTGATTTATGAGTAGAAAGCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACAACAGCAGAGATGGAACATGATTGATTTATGAGTAGAAAGCCTT  300

seq1  GTTTACTGTGAGTTTTGGAATCAGGAAGAAGAAAAAAAAAGAGTGCTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTGTGAGTTTTGGAATCAGGAAGAAGAAAAAAAAAGAGTGCTACT  350

seq1  TCAGACCTTTGGAATTAAGTAATTAAAAGCTGACACAGAGGAAGCTCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACCTTTGGAATTAAGTAATTAAAAGCTGACACAGAGGAAGCTCAAT  400

seq1  TTATATTGCTTTAAATCACATACAAATATGTAGGGACAAGTATATTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTGCTTTAAATCACATACAAATATGTAGGGACAAGTATATTTTTC  450

seq1  AGAGCTTATAAGTTATTCTATATGATTCTTTTGGTCTTTCAGGAAGTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTATAAGTTATTCTATATGATTCTTTTGGTCTTTCAGGAAGTTTG  500

seq1  GGATTTCTATTTTCAAACAGTCAATATATTTGAAAGAACGCTTTATACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCTATTTTCAAACAGTCAATATATTTGAAAGAACGCTTTATACCA  550

seq1  ACTAATTTGAATTC  564
      ||||||||||||||
seq2  ACTAATTTGAATTC  564

seq1: chrX_62495668_62496797
seq2: B6Ng01-120P08.g_69_1187

seq1  GAATTCTGTAGTGAGCGAAATCCCTACCATTAATTTAGAAAAATATTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAGTGAGCGAAATCCCTACCATTAATTTAGAAAAATATTGAT  50

seq1  TCAAATATATTTTCTAATAAGGCAAATGCCAGAAGCTTATAAAAAGAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATATATTTTCTAATAAGGCAAATGCCAGAAGCTTATAAAAAGAAAT  100

seq1  AGTAAAGAAAGGAATAAAATCTAGTAGTTAAATTATATTGAAATAAAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGAAAGGAATAAAATCTAGTAGTTAAATTATATTGAAATAAAGTG  150

seq1  TAATAAAGCTCATGGTCCTAAGTTCTATAAGAAGGCAGTCTGAAAAAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAGCTCATGGTCCTAAGTTCTATAAGAAGGCAGTCTGAAAAAGCC  200

seq1  ATGGGAAACAAACCAGTAAATAGCATCCCTTCATGAACTCTGCCTCAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAACAAACCAGTAAATAGCATCCCTTCATGAACTCTGCCTCAGCT  250

seq1  CCTGCCTACAAGTTCCTGCCCTGTGAGAGTTCCTGTCCTGACTTCCTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTACAAGTTCCTGCCCTGTGAGAGTTCCTGTCCTGACTTCCTTTA  300

seq1  GTAATTGACTATGATGTGGAAGTGTAACTTAAATAAACCCTTAATTCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTGACTATGATGTGGAAGTGTAACTTAAATAAACCCTTAATTCTCA  350

seq1  CCCCTAAGATAGCTTTGCATAGACTCAGTTAAAAACAGAAGCAATTTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAAGATAGCTTTGCATAGACTCAGTTAAAAACAGAAGCAATTTACT  400

seq1  TTTGGTCTTTTTAAAACAGAGTTTGATAAATAAAGTTATTAATTTAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTCTTTTTAAAACAGAGTTTGATAAATAAAGTTATTAATTTAAACA  450

seq1  TTTATTCATAAGAATATTCACAACACAACCATTTCCTTTTTATTTTTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCATAAGAATATTCACAACACAACCATTTCCTTTTTATTTTTGTT  500

seq1  TATATTTAATATGCATTGTATTTTATAATGAGAACATAATTTTTTATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTAATATGCATTGTATTTTATAATGAGAACATAATTTTTTATGTT  550

seq1  GCAGATAGAAAAAAATCATGAAATTAATCTATTAAATTGAACAACATTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATAGAAAAAAATCATGAAATTAATCTATTAAATTGAACAACATTCC  600

seq1  ATTATTTAAATAATAGTATTTAACAAGTACTTTCTTTTTTAAAAATATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTAAATAATAGTATTTAACAAGTACTTTCTTTTTTAAAAATATTG  650

seq1  ATCCAGCACACCAAACAGACCTAGGTTTTAGAGGCAATTCCCCTAGGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGCACACCAAACAGACCTAGGTTTTAGAGGCAATTCCCCTAGGATT  700

seq1  TTTTTTAAGTCTGCTATATTATTAAAGATTTTCTCCCTTTCATCCAAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAGTCTGCTATATTATTAAAGATTTTCTCCCTTTCATCCAAAAC  750

seq1  GTATTCTTTTCTCATACATTTTCTCTAT-AAGGAGAAATATTATTTGCTC  799
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GTATTCTTTTCTCATACATTTTCTCTATAAAGGAGAAATATTATTTGCTC  800

seq1  AAAATCTAAGATCATTTGTTTTACTTAGTACGGATGTATATTTTCATTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTAAGATCATTTGTTTTACTTAGTACGGATGTATATTTTCATTTT  850

seq1  GCCTATCAAACAATATTACCTCTTAATATAGCTACATATAAATTAATGAT  899
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GCCTATCAAACAATATTACCTCTTTATATAGCTACATATAAATTAATGAT  900

seq1  TATTCTTTGGAGGGCAGAGTTACAGATGATTACTTATTTTCTGCACATTT  949
      | ||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  T-TTC-TTGGAGGGCAGAGTTACAGATGATTACTTATTTTCTGCACATTT  948

seq1  CAAATTTCTAAGAATAATATCACTAACGTGTCAAATATACAAAATTTAAT  999
      |||||||||| ||   |||||||||||||||||||||||||||  || ||
seq2  CAAATTTCTAGGA--TATATCACTAACGTGTCAAATATACAAA--TTTAT  994

seq1  TCTTTTGAATAATGGCAGGAAAAAACAAGTCAAACAATAAAATACTGCAC  1049
      |||||||||| ||||||||||||||| |||||||||||||||||||||||
seq2  TCTTTTGAAT-ATGGCAGGAAAAAAC-AGTCAAACAATAAAATACTGCAC  1042

seq1  ACACGCCAATACATAACAGGAGCTATTTTGTGCTGAAGACCAGATCCATC  1099
      ||||||| |||||| |||||||||||||||||||| ||||||||||||||
seq2  ACACGCC-ATACAT-ACAGGAGCTATTTTGTGCTG-AGACCAGATCCATC  1089

seq1  ATACTCGATAATCAACCAAAGATTTTTTTTT  1130
      ||||||||| |||||| ||  ||||||||||
seq2  ATACTCGAT-ATCAACGAAGAATTTTTTTTT  1119