BAC Information

Click to search

BAC

Clone NameB6Ng01-123L12
ChromosomeX (Build37)
Map Location 87,229,236 - 87,229,874
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041727, LOC667934, Pet2, EG629419, 4932429P05Rik, LOC633246, Nanog-ps1, 4930415L06Rik
Downstream geneEG547215, Gm370, LOC194615, LOC629471, LOC100041815, Gm44
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123L12.bB6Ng01-123L12.g
ACCDH926811DH926812
length1,246654
definitionDH926811|Mus musculus domesticus DNA, BAC clone: B6Ng01-123L12, 5' end.DH926812|Mus musculus domesticus DNA, BAC clone: B6Ng01-123L12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtgccacattttttaattaaggttattttat
tttctggagtccaccttcttcagttctttatatatattggatagtatccc
ctatctgatttaggattggtaaagatcctttcctagtctattggtgccct
ttcctttttgtcttattgacagtgtcttttgccttacagaagctttgtaa
ttttatgaggtcccatttttaaattatggctcttacagcacaagccattt
ttgatctattcgggaatttccctcctgttcccataatttccagactttcc
ctcactttcttctctataagtttcagtgtctctggtttcatgtggagttc
ctttatccacttaaacctgaccttaggacaaggagataagaatagatcaa
ttcaaattcttctacatgataactgccagttgtgccagcaccatttgttg
aaaatgctgtcttttctccactgggtggttttagctcctttgtcaaagat
caagtgaccgtaggtgtgtgggttcatttctgcatcttcatttctattcc
attgatctgcctgtctgtcactataccagtaccaagcagtttttattaca
aattctctgtagtacacctttaggtcaggcttggtgattccaccagaggt
tcttttatcattgacaatagtttttgctatactagtttttttgttattcc
agatgaatttgaaaattgccctttctaatttgttgaagaactgattttga
attttgatggggattgcattgaatctgtagattgcttttggcaagatagc
catttttactatattgatactgccaatccatgagtatgggagacttaccc
atcttctgagatcttcttcaatttctttcttcagagtcttgaagttctta
tcatacagatttttcacttgcttagttagagtctcaccaaggtcttttat
attgttatgacattgtcaatggtgttgtttccccattccttcgcagcctg
tttatccttgtgtagagaaaggcacttgattagattatttaatttataat
ctagctacttcactgaagatgtttatcagtttaggagttctcctgctgga
aaatttaagggtcactatatatactatcatatcatctggcaaaccttaat
ttggactcttctttctaattgtaatcctggaccctttgtgtctgtgctcg
gcaggacttcaacatacaggtgaacacatgctacgtagcacagcat
gaattctcacctgaagaataccgaatggctgagaagcacctgaaaaaatg
attaacgtccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaagtgacagc
agatgctggggaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgtaatacttctcctgggc
atatatccagaagatgtcccatccagtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaacctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaaaatgtggtacatttacacaa
tggagtttactcagctattataaagaatgaatttatgaaattcctaggca
aatggttggacctgtatgctaatttcattgtgtatcttaaatgatctttg
ttaagcattgggaacagaggccccttggtctagcaaacttttatatgccc
cagtacaggtaaaagccagggccaagatgtaggagtgagtgggtagggga
gcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_87229236_87229874
seq2: B6Ng01-123L12.g_83_722

seq1  AGAATACCGAATGGCTGAGAAGCACCTGAAAAAATGATTAACGTCCTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACCGAATGGCTGAGAAGCACCTGAAAAAATGATTAACGTCCTTAA  50

seq1  TCATCAGAGAAATGCAAATCAAAACAACCCTGAGATTCCATCTCACACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGAGAAATGCAAATCAAAACAACCCTGAGATTCCATCTCACACCA  100

seq1  GTCAGAATGGCTAAGATCAAAAATTCAAGTGACAGCAGATGCTGGGGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAATGGCTAAGATCAAAAATTCAAGTGACAGCAGATGCTGGGGAGG  150

seq1  ATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTG  200

seq1  TACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATA  250

seq1  GTACTACCGGAGGATCCCGTAATACTTCTCCTGGGCATATATCCAGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTACCGGAGGATCCCGTAATACTTCTCCTGGGCATATATCCAGAAGA  300

seq1  TGTCCCATCCAGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCATCCAGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCT  350

seq1  TATTTATAATAGCCAGAACCTGGAAAGAACCCAGATGCCCCTCAACAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATAATAGCCAGAACCTGGAAAGAACCCAGATGCCCCTCAACAGAG  400

seq1  GAATGGATACAAAAAAAATGTGGTACATTTACACAATGGAGTTTACTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGATACAAAAAAAATGTGGTACATTTACACAATGGAGTTTACTCAG  450

seq1  CTATTATAAAGAATGAATTTATGAAATTCCTAGGCAAATGGTTGGACCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATAAAGAATGAATTTATGAAATTCCTAGGCAAATGGTTGGACCTG  500

seq1  TATGCTAATTTCATTGTGTATCTTAAATGATCTTTGTTAAGCATTGGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTAATTTCATTGTGTATCTTAAATGATCTTTGTTAAGCATTGGGAA  550

seq1  CAGAGGCCCCTTGGTCTAGCAAAC-TTTATATGCCCCAGTACAGGTAAAA  599
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CAGAGGCCCCTTGGTCTAGCAAACTTTTATATGCCCCAGTACAGGTAAAA  600

seq1  GCCAGGGCCAAGATGTAGGAGTGAGTGGGTAGGGGAGCAG  639
      ||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGCCAAGATGTAGGAGTGAGTGGGTAGGGGAGCAG  640