BAC Information

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BAC

Clone NameB6Ng01-125B21
ChromosomeX (Build37)
Map Location 42,692,928 - 42,693,610
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC637141, Wdr40c, Wdr40b, LOC665585, 1110059M19Rik
Downstream geneLOC100040038, EG385346, LOC100040075, Actrt1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125B21.bB6Ng01-125B21.g
ACCDH927845DH927846
length1,173694
definitionDH927845|Mus musculus domesticus DNA, BAC clone: B6Ng01-125B21, 5' end.DH927846|Mus musculus domesticus DNA, BAC clone: B6Ng01-125B21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtccacccttttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacagtgtcttttgccttacagaagctttgcagtttca
tgaggtcccatttgtcaattttgatcttacagcacaagccattgctgtgt
tctattcaggaatttttcccctgtgcccatatcttcgaggcttttctcca
ctttctcctctataagtttcagtgtctctggttttatgtgaagttccttg
atccacttagatttggccttagtacaaggagataggaatggatcgattct
cattcttctgcatgttaacaaccagttgtgccagcaccatttgttgaaaa
tgctgtttttcttccacgtgatggttttagctcccttgtcaaatatcaag
ttaccataggtttgtgggttcatttctgggtcttcaattctattccattg
gtctacttgtctgtcattataccagtaccatgcagtttttatcacaattg
ctctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctt
ttatccttgagaagagtttttgctgtctttggttttttgttattccagat
caatttcgagattgcactttctaattcgttgaagaattgaggtggaattt
tgatggggattgcattgaatctgtagatttcttttggcaagatagccatt
tttacaaagttgattctgccaatccatgagcataggagatctttccatct
tctgagatcttcttaatttctttcttcagagacttgaagttcttatcata
cagatcttttacttccttagtagagtcacaccaagatattttatatattg
tgactatgagacggtgttgcttccctaatttctttctagctgtatctttg
tgtagaataaggccatgaattgttgagtattatattcagctacttcccga
gctgttttccagctaagagttctctggtgatttagggtcactcataatac
atccaatcatctgcaaaaggtaaatttagaatcctcttccatgatatcct
ggactcccttggtggcgcaatga
gaattctctgctgtggtgtctcacatggttcaagcaggcttctgctctac
tctgcaccctctgagtggtggcaggagcagaggggtttgtttaagtccac
attccttctccctgaaggacctctcccagtttgaaaaacagttaggttcc
ttctctgccaacccattggcctatattaaagagttcagccacctttgcag
gcctatgacataacttggcacgccctttatgacatataggcttacaccct
tactcctgaggaacgtggatgagttcaggcagtacacagactagacctac
ctagtggacgatacagtccctgtgggtaacacagtggtgctagctacaaa
acccaactggaattaccagcagtgtcaaaatggcctccaaggaagagacc
tcatggtctgctgcctccttcaggatatggaatcagtctcaaagttgtta
actttaataagtttctgtgaaatcacacaagcagatgaaaatctagccat
ttttctggatcgagtacagaagaccatgatacgatatatcctcctcagtg
gaagcaaaggtcctggatactattatatttctcagtcatggttagatatt
cgaatatatatatatatatatatgtgtgtatgtatgtatgtatatatatg
tatatatacatatgtatacacacgtgtgtgatatatatatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_42692928_42693610
seq2: B6Ng01-125B21.g_68_761 (reverse)

seq1  ATATATATATATA-----------TATATATATATATATATATATATATA  39
      |||||||||||||           | |||| |||| |||||||| |||||
seq2  ATATATATATATATCACACACGTGTGTATACATATGTATATATACATATA  50

seq1  TATACATACATACATACACACATATATATATATATATATATTCGAATATC  89
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATACATACATACACACATATATATATATATATATATTCGAATATC  100

seq1  TAACCATGACTGAGAAATATAATAGTATCCAGGACCTTTGCTTCCACTGA  139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCATGACTGAGAAATATAATAGTATCCAGGACCTTTGCTTCCACTGA  150

seq1  GGAGGATATATCGTATCATGGTCTTCTGTACTCGATCCAGAAAAATGGCT  189
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATATATCGTATCATGGTCTTCTGTACTCGATCCAGAAAAATGGCT  200

seq1  AGATTTTCATCTGCTTGTGTGATTTCACAGAAACTTATTAAAGTTAACAA  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTCATCTGCTTGTGTGATTTCACAGAAACTTATTAAAGTTAACAA  250

seq1  CTTTGAGACTGATTCCATATCCTGAAGGAGGCAGCAGACCATGAGGTCTC  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGACTGATTCCATATCCTGAAGGAGGCAGCAGACCATGAGGTCTC  300

seq1  TTCCTTGGAGGCCATTTTGACACTGCTGGTAATTCCAGTTGGGTTTTGTA  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGGAGGCCATTTTGACACTGCTGGTAATTCCAGTTGGGTTTTGTA  350

seq1  GCTAGCACCACTGTGTTACCCACAGGGACTGTATCGTCCACTAGGTAGGT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCACCACTGTGTTACCCACAGGGACTGTATCGTCCACTAGGTAGGT  400

seq1  CTAGTCTGTGTACTGCCTGAACTCATCCACGTTCCTCAGGAGTAAGGGTG  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCTGTGTACTGCCTGAACTCATCCACGTTCCTCAGGAGTAAGGGTG  450

seq1  TAAGCCTATATGTCATAAAGGGCGTGCCAAGTTATGTCATAGGCCTGCAA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCTATATGTCATAAAGGGCGTGCCAAGTTATGTCATAGGCCTGCAA  500

seq1  AGGTGGCTGAACTCTTTAATATAGGCCAATGGGTTGGCAGAGAAGGAACC  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGCTGAACTCTTTAATATAGGCCAATGGGTTGGCAGAGAAGGAACC  550

seq1  TAACTGTTTTTCAAACTGGGAGAGGTCCTTCAGGGAGAAGGAATGTGGAC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTTTTTCAAACTGGGAGAGGTCCTTCAGGGAGAAGGAATGTGGAC  600

seq1  TTAAACAAACCCCTCTGCTCCTGCCACCACTCAGAGGGTGCAGAGTAGAG  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAAACCCCTCTGCTCCTGCCACCACTCAGAGGGTGCAGAGTAGAG  650

seq1  CAGAAGCCTGCTTGAACCATGTGAGACACCACAGCAGAGAATTC  683
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCCTGCTTGAACCATGTGAGACACCACAGCAGAGAATTC  694