BAC Information

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BAC

Clone NameB6Ng01-126A12
ChromosomeX (Build37)
Map Location 103,129,453 - 103,263,809
singlet/doubletdoublet
Overlap gene2610529C04Rik, Cox7b, Atp7a
Upstream geneLOC622098, LOC676331, 5530601H04Rik, 2610029G23Rik, Magee1, LOC622159, LOC668454, E530001F21Rik, LOC622202, LOC100043213, LOC668458, Cypt2, EG633570, Fgf16, Atrx
Downstream geneTlr13, LOC671297, Pgk1, Taf9b, 5031408O05Rik, EG333563, LOC622494, Gm784, Cysltr1, EG331493, LOC668490, LOC100042772, LOC100043263, Zcchc5, Gpr23
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126A12.bB6Ng01-126A12.g
ACCDH928506DH928507
length1,024888
definitionDH928506|Mus musculus domesticus DNA, BAC clone: B6Ng01-126A12, 5' end.DH928507|Mus musculus domesticus DNA, BAC clone: B6Ng01-126A12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,262,854 - 103,263,809)(103,129,453 - 103,130,343)
sequence
gaattcaaggccaggtactggagagataactattcagtcaagaaccctgg
ctactcttccggaaagcctggatttaacttccagcatccacagccatctg
tagttcaagtttcagggaatccaacactacttctgcccttctcgagcacc
aggcccacatggtacacagacatacatgcaggcaaaatacccatccacat
aaaataaaatattttaagaaatagttcaagatcagtccaacttatatagt
aacaattagagtcaaataaataagaggggagggaaatgcgtgtttgctta
tgtgtgcacatgcacatgtacacaagagagatcagaggacaacttgtagg
aattagttctgtcttttcaccatgtgggttccaggggaccaaactcaggc
ttgttgtcaagcccctttaattccgccattccactggccccaggtgttca
ctttaaaactggaatataattcacaagctaagaaacttaagtctttcaag
tgtttcagttcactggcttttgatacactgaaaagatgtacaatcatagc
aatcacatggttgtagaacatcttcatttcccccgaaaaagaagcccacc
cccccacccccccggctagcaagatggctgagcaagtacaagtttctacc
accaagcctgacggtctgaattcaacgcctgacactcacaccctggaagg
agggagatcaacttctccaaggtgacctctgacctacactcacatgttct
ggcatgtgcatacacacatgcaaaataataaagatgaaatcaacaaaacc
cccactgtcgctagcagttgctcccactctcatgtcctcagtccctagaa
atactgatgtacgtcctgtctctacagatgtgcctacactgggtcatttc
atgtaaaatacatttccctcaatatgtgggggttttatgtctagattttt
atagttagtgtatttttcaaagtacaatcacaaactgcatatactgacat
tttcattctttttgctcttggatg
gaattctcccaagttgcttcagcaaatgctagtttcagtcagttgtgctc
agaagccagacattcttcatatgatttcagtctttttatttatttattta
tttaattgttttgttcattgagccgccgtctcgactgtgatgggagaagc
ttttcttagggatacacaacacacaattacgattgcctgaaagggaaact
acaatcaaaggaagtattgattgcatcaatgcccaacttgggaagcaaac
tttttattaggagtatggttgaagggttactttcataagcagagatgact
caaaagccattgcaccacgaaaagtccactttgatgcacaggagtctcaa
aagacaacagcatcactgcagctctctgcctgacttacaggaagctaagg
ctccaagattctctgccagtagttcaggctcctccccttgcagttgttta
cgccttttataaagttaggaaaaggcctccaagaatcttccaagtttcgg
ctttctcaggcacgtgactttttgtttacctctttggtctgagaagccgc
cccctcctacagagcctgtttttattcccaggaaactgccttaaaacagt
gacctaatttatgctggagtctagaatatgttccatgggcacatgaaaaa
aattttttattaaatataagaagcattagatattaattttctaccaaaca
cattaagaaaattggtgtttaagacaaggaatgcaaatgtttttgtctgt
ctttttctatcttccttacatttaggcaaatgtttaatccttcaacactt
taagaaaacttttaaaagaaaccatctgcagataaaaatcacatattgag
ccctgcatggtggcacatgcctttatcccagcacttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_103262854_103263809
seq2: B6Ng01-126A12.b_49_1007 (reverse)

seq1  ACTAACTATAAAAATCTAGACATAAAA-CCCCACATATTGAGGG-AATGT  48
      ||||||||||||||||||||||||||| |||||||||||||||| |||||
seq2  ACTAACTATAAAAATCTAGACATAAAACCCCCACATATTGAGGGAAATGT  50

seq1  A-TTTACATGAAATGA-CCAGTGTAGGCACATCTGTAGAGACAGGACGTA  96
      | |||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATTTTACATGAAATGACCCAGTGTAGGCACATCTGTAGAGACAGGACGTA  100

seq1  CATCAGTATTTTCTAGGGACTGAGGACATGAGAGTGGGAGCAACTGCTAG  146
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTA-TTTCTAGGGACTGAGGACATGAGAGTGGGAGCAACTGCTAG  149

seq1  CGACAGTGGGGGTTTTGTTGATTTCATCTTTATTATTTTGCATGTGTGTA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACAGTGGGGGTTTTGTTGATTTCATCTTTATTATTTTGCATGTGTGTA  199

seq1  TGCACATGCCAGAACATGTGAGTGTAGGTCAGAGGTCACCTTGGAGAAGT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATGCCAGAACATGTGAGTGTAGGTCAGAGGTCACCTTGGAGAAGT  249

seq1  TGATCTCCCTCCTTCCAGGGTGTGAGTGTCAGGCGTTGAATTCAGACCGT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTCCCTCCTTCCAGGGTGTGAGTGTCAGGCGTTGAATTCAGACCGT  299

seq1  CAGGCTTGGTGGTAGAAACTTGTACTTGCTCAGCCATCTTGCTAGCCGGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTGGTGGTAGAAACTTGTACTTGCTCAGCCATCTTGCTAGCCGGG  349

seq1  GGGGTGGGGGGGTGGGCTTCTTTTTCGGGGGAAATGAAGATGTTCTACAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGGGGGTGGGCTTCTTTTTCGGGGGAAATGAAGATGTTCTACAA  399

seq1  CCATGTGATTGCTATGATTGTACATCTTTTCAGTGTATCAAAAGCCAGTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGATTGCTATGATTGTACATCTTTTCAGTGTATCAAAAGCCAGTG  449

seq1  AACTGAAACACTTGAAAGACTTAAGTTTCTTAGCTTGTGAATTATATTCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAACACTTGAAAGACTTAAGTTTCTTAGCTTGTGAATTATATTCC  499

seq1  AGTTTTAAAGTGAACACCTGGGGCCAGTGGAATGGCGGAATTAAAGGGGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAAAGTGAACACCTGGGGCCAGTGGAATGGCGGAATTAAAGGGGC  549

seq1  TTGACAACAAGCCTGAGTTTGGTCCCCTGGAACCCACATGGTGAAAAGAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAACAAGCCTGAGTTTGGTCCCCTGGAACCCACATGGTGAAAAGAC  599

seq1  AGAACTAATTCCTACAAGTTGTCCTCTGATCTCTCTTGTGTACATGTGCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTAATTCCTACAAGTTGTCCTCTGATCTCTCTTGTGTACATGTGCA  649

seq1  TGTGCACACATAAGCAAACACGCATTTCCCTCCCCTCTTATTTATTTGAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACACATAAGCAAACACGCATTTCCCTCCCCTCTTATTTATTTGAC  699

seq1  TCTAATTGTTACTATATAAGTTGGACTGATCTTGAACTATTTCTTAAAAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTGTTACTATATAAGTTGGACTGATCTTGAACTATTTCTTAAAAT  749

seq1  ATTTTATTTTATGTGGATGGGTATTTTGCCTGCATGTATGTCTGTGTACC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTTATGTGGATGGGTATTTTGCCTGCATGTATGTCTGTGTACC  799

seq1  ATGTGGGCCTGGTGCTCGAGAAGGGCAGAAGTAGTGTTGGATTCCCTGAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGGCCTGGTGCTCGAGAAGGGCAGAAGTAGTGTTGGATTCCCTGAA  849

seq1  ACTTGAACTACAGATGGCTGTGGATGCTGGAAGTTAAATCCAGGCTTTCC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAACTACAGATGGCTGTGGATGCTGGAAGTTAAATCCAGGCTTTCC  899

seq1  GGAAGAGTAGCCAGGGTTCTTGACTGAATAGTTATCTCTCCAGTACCTGG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGTAGCCAGGGTTCTTGACTGAATAGTTATCTCTCCAGTACCTGG  949

seq1  CCTTGAATTC  956
      ||||||||||
seq2  CCTTGAATTC  959

seq1: chrX_103129453_103130343
seq2: B6Ng01-126A12.g_70_957

seq1  GAATTCTCCCAAGTTGCTTCAGCAAATGCTAGTTTCAGTCAGTTGTGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCAAGTTGCTTCAGCAAATGCTAGTTTCAGTCAGTTGTGCTC  50

seq1  AGAAGCCAGACATTCTTCATATGATTTCAGTCTTTTTATTTATTTATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCAGACATTCTTCATATGATTTCAGTCTTTTTATTTATTTATTTA  100

seq1  TTTAATTGTTTTGTTCATTGAGCCGCCGTCTCGACTGTGATGGGAGAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTGTTTTGTTCATTGAGCCGCCGTCTCGACTGTGATGGGAGAAGC  150

seq1  TTTTCTTAGGGATACACAACACACAATTACGATTGCCTGAAAGGGAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTAGGGATACACAACACACAATTACGATTGCCTGAAAGGGAAACT  200

seq1  ACAATCAAAGGAAGTATTGATTGCATCAATGCCCAACTTGGGAAGCAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCAAAGGAAGTATTGATTGCATCAATGCCCAACTTGGGAAGCAAAC  250

seq1  TTTTTATTAGGAGTATGGTTGAAGGGTTACTTTCATAAGCAGAGATGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTAGGAGTATGGTTGAAGGGTTACTTTCATAAGCAGAGATGACT  300

seq1  CAAAAGCCATTGCACCACGAAAAGTCCACTTTGATGCACAGGAGTCTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCCATTGCACCACGAAAAGTCCACTTTGATGCACAGGAGTCTCAA  350

seq1  AAGACAACAGCATCACTGCAGCTCTCTGCCTGACTTACAGGAAGCTAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAACAGCATCACTGCAGCTCTCTGCCTGACTTACAGGAAGCTAAGG  400

seq1  CTCCAAGATTCTCTGCCAGTAGTTCAGGCTCCTCCCCTTGCAGTTGTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGATTCTCTGCCAGTAGTTCAGGCTCCTCCCCTTGCAGTTGTTTA  450

seq1  CGCCTTTTATAAAGTTAGGAAAAGGCCTCCAAGAATCTTCCAAGTTTCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTTTTATAAAGTTAGGAAAAGGCCTCCAAGAATCTTCCAAGTTTCGG  500

seq1  CTTTCTCAGGCACGTGACTTTTTGTTTACCTCTTTGGTCTGAGAAGCCGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCAGGCACGTGACTTTTTGTTTACCTCTTTGGTCTGAGAAGCCGC  550

seq1  CCCCTCCTACAGAGCCTGTTTTTATTCCCAGGAAACTGCCTTAAAACAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCTACAGAGCCTGTTTTTATTCCCAGGAAACTGCCTTAAAACAGT  600

seq1  GACCTAATTTATGCTGGAGTCTAGAATATGTTCCATGGGCACATGAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAATTTATGCTGGAGTCTAGAATATGTTCCATGGGCACATGAAAAA  650

seq1  AATTTTTTATTAAATATAAGAAGCATTAGATATTAATTTTCTACCAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTATTAAATATAAGAAGCATTAGATATTAATTTTCTACCAAACA  700

seq1  CATTAAGAAAATTGGTGTTTAAGACAAGGAATGCAAATGTTTTTGTCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGAAAATTGGTGTTTAAGACAAGGAATGCAAATGTTTTTGTCTGT  750

seq1  CTTTTTCTATCTTCCTTACATTTAGGCAAATGTTTAATCCTTCAAACACT  800
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTTTTTCTATCTTCCTTACATTTAGGCAAATGTTTAATCCTTC-AACACT  799

seq1  TTAAGAAAACTTTTAAAAGAAACCATTCTGCAGATAAAAATCACATATTG  850
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTAAGAAAACTTTTAAAAGAAACCA-TCTGCAGATAAAAATCACATATTG  848

seq1  AGCCCTGCATGGTGGCACATGCCTTTAATCCCAGCACTTGG  891
      |||||||||||||||||||||||||| ||||||||||||||
seq2  AGCCCTGCATGGTGGCACATGCCTTT-ATCCCAGCACTTGG  888