BAC Information

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BAC

Clone NameB6Ng01-128B07
ChromosomeX (Build37)
Map Location 151,808,107 - 151,809,211
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434879, LOC667313, 4930542N07Rik, EG434881, LOC100040899, LOC667331, LOC100040925, LOC100040937, Magea6, Magea3, LOC626034, Magea8, Magea2, Magea5, Magea1, 1700042B14Rik, LOC245676, Amd-ps1, LOC667369, Sat1, Acot9, LOC667383, Prdx4
Downstream geneLOC667394, Ptchd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128B07.bB6Ng01-128B07.g
ACCDH930027DH930028
length1,1631,092
definitionDH930027|Mus musculus domesticus DNA, BAC clone: B6Ng01-128B07, 5' end.DH930028|Mus musculus domesticus DNA, BAC clone: B6Ng01-128B07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccatttttccatagggtaatttggtt
ttctgaaatccaacttcttgagttctttatatatattggatattagtcac
ctattggatttaggattggtaaaggacctttcccaatctgttggtggcct
ttttctcttattgacagtgtcctttgccttacagaacctttgctatttta
tgagttcccatttgtcaattcttgatcttagagcataagccattcctgtt
ctgttcaggggtttctctcctgtgcccatatctttgaggctcttccccag
tttctcctatataagtttcagttgtctctggttttatgtggagttccttg
atccacttagactttatctttgtacaaggaaataataatggatcaattcg
cattcttctacatgacaaccaccagttgaggcagcaacatttgttgaaaa
tgctttcttcgttccattagatggttttagctactttgtcaaagattaag
tgactataggtgtgtggtttcatttctgggtgtttgattctattccattg
atctacctgtctatcacggtaccaataccatgcagtttttatcacaagtg
ttccctagtataggttgaggtcagggatggtgattccaccagaggttctt
ttattgttgagaatagtttttgatatcctaggttttttgttattccagat
gaatttgtaaattgtcctttctaactcagagaagaattaagttggaattt
tgatggggattgcattgaatgtgtagattgcttttggcaagatatccatt
tttactatattaatcctgccaaaactgaagcatggaagatctttccaact
tctgagatcttctttgacttctttgttcagagacttgaagttcttatcat
acagatctttcacttccctagagtcacacccaggtatttatattattgtg
actattttgaataatgttgtttccctaatgctttctcagcctgtttacct
ttgtgtagagaaaactcatttgtttgagttaatttatatcttagctactt
cacctgaagtgtttatcagggttaggagttctctgggtggaatttgggtc
cattataatcgcttcacaccactccgagatgggccatttttatctccttt
ctttcctatggtt
gaattctaggaaagaacttttagttggatggtagtgtttttaaatttcat
taacatactaattaattgctttctttattgtggtgctggagatcttgctc
atgttaggcaatttctctaccactgagctacactactagcctggactctt
tgtttacaattagattcaccatttatattgagtcaaacagtgagggtacc
cttatagaaaaatttattcagtagtggaaagttacctgggatgccattgg
atagtgcaggagttctcaaccttcctaatgctgcaatcctttaatagagt
tcctcatgtggtggcaattccaaaccataaaactatgttcactgatactt
cataactgtaatattgctaatattgctactgttatgagtaataatgcaaa
tatgtgtgttttctgatggtcttaggtgacccctgtgaaagggtctttag
actcacaaaggcgctgtgacccacaggctgaaaaccactaggatagtgga
atatgttcttactgaagaaactgaaaggagaagttggaaccaatagtgag
atcccagtggtgtagacatataaaaaacaaaataaaaacgtcacatagca
tttccctagatgggtattcccatttaaatctagtgatttgttatgagttt
ggaggcaatgtggagcttcagaccaaatgtaacatctatgtcatatcttc
ttgtcatttaacacttcttcctatgtttctctttggacaataaaggtctt
gaattttcttttctttttttttttaaagaatttctttgttttttaagatt
tatttattattataatctaagtacactgtagctgtcttcagacacacaga
agagagcgtccgatctccttaaagatggttgtgagccaccatgtgatgct
gggattgaacttaggaccttcggaagagcagtcagtgctcttaactcttg
agccatctcttcagcccgatcttgattttcatgttacagacatagttgta
tataagtctagccaaatatgtatggggcggggcttacagcatgtgtctgc
ctggattccatagtctttttatgaggagcaccacaagagcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_151808107_151809211
seq2: B6Ng01-128B07.g_69_1160

seq1  GAATTCTAGGAAAGAACTTTTAGTTGGATGGTAGTGTTTTTAAATTTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGAAAGAACTTTTAGTTGGATGGTAGTGTTTTTAAATTTCAT  50

seq1  TAACATACTAATTAATTGCTTTCTTTATTGTGGTGCTGGAGATCTTGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATACTAATTAATTGCTTTCTTTATTGTGGTGCTGGAGATCTTGCTC  100

seq1  ATGTTAGGCAATTTCTCTACCACTGAGCTACACTACTAGCCTGGACTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAGGCAATTTCTCTACCACTGAGCTACACTACTAGCCTGGACTCTT  150

seq1  TGTTTACAATTAGATTCACCATTTATATTGAGTCAAACAGTGAGGGTACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACAATTAGATTCACCATTTATATTGAGTCAAACAGTGAGGGTACC  200

seq1  CTTATAGAAAAATTTATTCAGTAGTGGAAAGTTACCTGGGATGCCATTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAGAAAAATTTATTCAGTAGTGGAAAGTTACCTGGGATGCCATTGG  250

seq1  ATAGTGCAGGAGTTCTCAACCTTCCTAATGCTGCAATCCTTTAATAGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGCAGGAGTTCTCAACCTTCCTAATGCTGCAATCCTTTAATAGAGT  300

seq1  TCCTCATGTGGTGGCAATTCCAAACCATAAAACTATGTTCACTGATACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATGTGGTGGCAATTCCAAACCATAAAACTATGTTCACTGATACTT  350

seq1  CATAACTGTAATATTGCTAATATTGCTACTGTTATGAGTAATAATGCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACTGTAATATTGCTAATATTGCTACTGTTATGAGTAATAATGCAAA  400

seq1  TATGTGTGTTTTCTGATGGTCTTAGGTGACCCCTGTGAAAGGGTCTTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGTTTTCTGATGGTCTTAGGTGACCCCTGTGAAAGGGTCTTTAG  450

seq1  ACTCACAAAGGCGCTGTGACCCACAGGCTGAAAACCACTAGGATAGTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAAAGGCGCTGTGACCCACAGGCTGAAAACCACTAGGATAGTGGA  500

seq1  ATATGTTCTTACTGAAGAAACTGAAAGGAGAAGTTGGAACCAATAGTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTCTTACTGAAGAAACTGAAAGGAGAAGTTGGAACCAATAGTGAG  550

seq1  ATCCCAGTGGTGTAGACATATAAAAAACAAAATAAAAACGTCACATAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGTGGTGTAGACATATAAAAAACAAAATAAAAACGTCACATAGCA  600

seq1  TTTCCCTAGATGGGTATTCCCATTTAAATCTAGTGATTTGTTATGAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTAGATGGGTATTCCCATTTAAATCTAGTGATTTGTTATGAGTTT  650

seq1  GGAGGCAATGTGGAGCTTCAGACCAAATGTAACATCTATGTCATATCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAATGTGGAGCTTCAGACCAAATGTAACATCTATGTCATATCTTC  700

seq1  TTGTCATTTAACACTTCTTCCTATGTTTCTCTTTGGACAATAAAGGTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATTTAACACTTCTTCCTATGTTTCTCTTTGGACAATAAAGGTCTT  750

seq1  GAATTTTCTTTTCTTTTTTTTTTTAAAGAATTTCTTTGTTTTTTAAGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTCTTTTCTTTTTTTTTTTAAAGAATTTCTTTGTTTTTTAAGATT  800

seq1  TATTTATTATTAT-ATCTAAGTACACTGTAGCTGTCTTCAGACACACCAG  849
      ||||||||||||| |||||||||||||||||||||||||||||||| |||
seq2  TATTTATTATTATAATCTAAGTACACTGTAGCTGTCTTCAGACACA-CAG  849

seq1  AAGAGAGCGTCCGATCTCCTTAAAGATGGTTGTGAGCCACCATGTGATTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAGAGAGCGTCCGATCTCCTTAAAGATGGTTGTGAGCCACCATGTGA-TG  898

seq1  CTGGGATTTGAACTTAGGACCTTCGGAAGAGCAGTCAGTGCTCTTAACCT  949
      |||||| |||||||||||||||||||||||||||||||||||||||||  
seq2  CTGGGA-TTGAACTTAGGACCTTCGGAAGAGCAGTCAGTGCTCTTAACTC  947

seq1  CTGAGCCATCTCTCCAGCCCGATCTTGAATTTTCATGTTACAGACATAAG  999
       |||||||||||| ||||||||||||| ||||||||||||||||||| ||
seq2  TTGAGCCATCTCTTCAGCCCGATCTTG-ATTTTCATGTTACAGACAT-AG  995

seq1  TTGATATAT-AGTCTAGCCAAATAATGTAT-GTGCGGGGCTTTATCAGCA  1047
      ||| ||||| ||||||||||||| |||||| | |||||||||   |||||
seq2  TTG-TATATAAGTCTAGCCAAAT-ATGTATGGGGCGGGGCTT--ACAGCA  1041

seq1  TTGTTGCTGCCTGGACTTCCATTAGTCCTTTTTTAGGAAGGAGCACCAAC  1097
       |||  ||||||||| ||||| |||||  |||||| | ||||||||| ||
seq2  -TGTGTCTGCCTGGA-TTCCA-TAGTC--TTTTTATG-AGGAGCACC-AC  1084

seq1  AAGAGCGT  1105
      ||||||||
seq2  AAGAGCGT  1092