MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-129K05
Chromosome	X (Build37)
Map Location	110,474,002 - 110,475,179
singlet/doublet	singlet
Overlap gene	Dach2
Upstream gene	Apool, Satl1, EG623341, 2010106E10Rik, Zfp711, Pof1b, LOC623412, EG623428, LOC100039112, Chm, EG664918
Downstream gene	LOC237016, EG664945, EG634881, LOC100039201
Link	Open Mouse BAC browser

Click to get alignment info.

name	Apool (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68117 MGI:1915367
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Satl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73809 MGI:1921059
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 5 Proteins

name	EG623341 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:623341 MGI:3647565
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins pseudo : _no_value

name	2010106E10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67715 MGI:1914965
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp711 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245595 MGI:3045342
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pof1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69693 MGI:1916943
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC623412 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623412
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG623428 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:623428 MGI:3645793
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100039112 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039112
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Chm (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12662 MGI:892979
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG664918 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664918 MGI:3644301
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Dach2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93837 MGI:1890446
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC237016 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:237016
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 Proteins pseudo : _no_value

name	EG664945 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664945 MGI:3647901
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	EG634881 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:634881 MGI:3645120
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC100039201 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039201
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	Apool (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27754049 GeneID:68117 MGI:1915367
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apolipoprotein O-like transcript_id : NM_026565.2

name	Satl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272135 GeneID:73809 MGI:1921059
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 5 Proteins product : spermidine/spermine N1-acetyl transferase-like 1 transcript_id : XM_136025.7

name	2010106E10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803565 GeneID:67715 MGI:1914965
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2010106E10 gene transcript_id : NM_026333.3

name	Zfp711 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125347347 GeneID:245595 MGI:3045342
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 711 transcript_id : NM_177747.3

name	Pof1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31657131 GeneID:69693 MGI:1916943
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : premature ovarian failure 1B transcript_id : NM_181579.1

name	Chm (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110681713 GeneID:12662 MGI:892979
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : choroidermia transcript_id : NM_018818.2

name	Dach2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71043937 GeneID:93837 MGI:1890446
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dachshund 2 (Drosophila) transcript_id : NM_033605.2

name	EG634881 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94408105 GeneID:634881 MGI:3645120
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG634881 transcript_id : XM_973543.1

name	LOC100039201 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272139 GeneID:100039201
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : hypothetical protein LOC100039201 transcript_id : XM_001472439.1

name	Apool (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386062 CCDS:CCDS30359.1 GeneID:68117 MGI:1915367
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] codon_start : 1 product : apolipoprotein O-like protein_id : NP_080841.1

name	Satl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272136 GeneID:73809 MGI:1921059
definition	codon_start : 1 product : spermidine/spermine N1-acetyl transferase-like 1 protein_id : XP_136025.5

name	2010106E10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754077 CCDS:CCDS30360.1 GeneID:67715 MGI:1914965
definition	codon_start : 1 product : hypothetical protein LOC67715 protein_id : NP_080609.2

name	Zfp711 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125347348 GeneID:245595 MGI:3045342
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 product : zinc finger protein 711 protein_id : NP_808415.2

name	Pof1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31657132 CCDS:CCDS30362.1 GeneID:69693 MGI:1916943
definition	GO_function : GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : premature ovarian failure 1B protein_id : NP_853557.1

name	Chm (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110681714 GeneID:12662 MGI:892979
definition	GO_component : GO:0005968 - Rab-protein geranylgeranyltransferase complex [Evidence IEA] GO_function : GO:0005084 - Rab escort protein activity [Evidence IEA]; GO:0004663 - Rab-protein geranylgeranyltransferase activity [Evidence IEA] GO_process : GO:0001568 - blood vessel development [Evidence IMP]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0043087 - regulation of GTPase activity [Evidence IEA] codon_start : 1 note : choroideremia product : choroidermia protein_id : NP_061288.2

name	Dach2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15809024 CCDS:CCDS30363.1 GeneID:93837 MGI:1890446
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007275 - development [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : dachshund 2 protein_id : NP_291083.1

name	EG634881 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94408106 GeneID:634881 MGI:3645120
definition	codon_start : 1 product : similar to histone deacetylase HD1 protein_id : XP_978637.1

name	LOC100039201 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272140 GeneID:100039201
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472489.1

name	LOC623412 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623412
definition	number : 1 pseudo : _no_value

name	EG623428 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623428
definition	number : 2 pseudo : _no_value

name	EG623428 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623428
definition	number : 1 pseudo : _no_value

name	LOC100039112 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039112
definition	number : 1 pseudo : _no_value

name	EG664918 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664918
definition	number : 4 pseudo : _no_value

name	EG664918 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664918
definition	number : 3 pseudo : _no_value

name	EG664918 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664918
definition	number : 2 pseudo : _no_value

name	EG664918 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664918
definition	number : 1 pseudo : _no_value

name	LOC237016 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:237016
definition	number : 1 pseudo : _no_value

name	EG664945 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664945
definition	number : 4 pseudo : _no_value

name	EG664945 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664945
definition	number : 3 pseudo : _no_value

name	EG664945 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664945
definition	number : 2 pseudo : _no_value

name	EG664945 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664945
definition	number : 1 pseudo : _no_value

name	EG623341 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149272137 GeneID:623341 MGI:3647565
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins product : predicted gene, EG623341 pseudo : _no_value transcript_id : XR_030590.1

clone name	MSMg01-159C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129J18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-472O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352K08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-407D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074A07
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-129K05.b	B6Ng01-129K05.g
ACC	DH931170	DH931171
length	1,161	1,146
definition	DH931170\|Mus musculus domesticus DNA, BAC clone: B6Ng01-129K05, 5' end.	DH931171\|Mus musculus domesticus DNA, BAC clone: B6Ng01-129K05, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctatatactatgaataaaattccatttactaattagagccaaaat tttttaaggggagtcagttctgtggttctgaagttttattaatctaagat tttgcctataatataattaatgcaatgtgataaaaagttatttaaagaaa aaccaaaagggctaggctgttttcaagtcttctgtgacatcctgatatat tgtataaattaacttcaatattcatcaaatgtacaataatagaattaaga tttctgatttttacatcttttatttttaatatgtgattttattaataact ataattattgcaaaatgaataaatattagctttatgtcttacaaactaca gtgcacaaagactgtgagttgatgtcttttgaatgttaggcccatcttca tggtttgtttattaatgggaacattttgtaggaaaaggattcttgtgttc tcaactgcagagaagaggggttattctccctaaattatttttattgatgt agtattagtcaagatatagaattatatagtacattaaaataaaaaattaa ataacaattcactattgtactgaatttcagttttgtttcttaagtttttc tgacaaaagtatatgtgtgaatttatcattatgatttttggttaaattta caagtaaaatgcttatagtgaaaagacatctgtatttatgcatagggata cataatagttttgccaaagtctatttctcatataaaaatctatatacata tttgcataaaattagaaagatctgaaaatctgcatacacacatgaaatca tcaccccaatcatatctataacaattttcctcctcctgttttgtgtatgt ttgaaaatttaactagaagtcacacgctttaagaaaattaaggatatagt acataatgcttattataggcactttgttgtacagcagatctcttatcatc ttgtgcaccaaaacacagccactgaaaagctgttcattttcttttctcct cagacatagcagctaacatttcctcactacttgtgtgcgttgctctgggt tatcctaaatggaattgtcatgttttccttctgtggctagcttatttact aactattctcgagtttctctatcttctgaatatgaacgaactttgtctga attatttccat	gaattctcacctgaggaataccgaatggctgaggagcacctgaaaaaatg ttcaacatccttaatcatcagggaaatacaaatcaaaacaaccctgagat tccacttcactccagtcagaatggctaagatcaaaaattcaggtgacagc agatgctggcgaggatatggagaaagaggaacactcctccattgttggtg ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca gaaaattggacatagtactactggaggatccagcaatacctctcctgggc atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaagctggaaagaacccagat gcccttcaacagaggaatggatacacaaaatgtggtacatttacacaatg gaatactactcagctattaaaaaatgaatttatgaaattcctaggcaaat ggatggacctggagggcatcatcctgagtgaggtaacccaaacacaaagg aactcgcacaatatgtctcactgataagtggatattagcccagaaactta ggatacccaagatataagatacaatttgctaaacgcatgaaattcaagaa gaatgaagaccaaagtgtggacactttgccccttcttagaaatgggaaca aaacacccattgaaggagttacagagacaaaatttggcgctgtgacgaaa ggatggaccatctagtgattgccatatgcagggatccatccaataatcag ctcccaaacgctgacaccattgcatacactagcaagattttgctgaaagg acccagatatagctgtctcttgtgagactatgccggggcctagcaaacac agaagtggatgatcccagtcagctattggatgggtcacacggccccatgg acgagctagagaattacccagaagctaaagggactgcaccctttagtgac acattatgactaccatacccggagctctgactcagctgcaattgtatcaa agatgctagtggcatcctgcaaagagagcccattgatttgcactgtatat gccattctgggacccaggccaaaggggagtggtgggtaggaatgta
quality values	Open. Hide. 61 47 37 35 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 30 24 43 13 43 49 55 36 44 44 44 43 61 61 59 61 61 59 61 59 59 61 61 61 61 61 59 55 55 59 61 59 61 61 59 55 61 61 61 61 61 61 45 52 36 30 35 43 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 55 55 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 59 59 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 55 55 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 47 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 53 57 52 34 57 57 57 53 53 47 50 53 53 57 53 57 53 57 57 53 53 57 53 52 53 53 53 53 57 53 47 57 47 33 57 57 57 57 57 47 24 47 47 57 53 52 46 47 50 53 45 57 53 53 42 57 57 53 47 47 33 53 53 52 50 41 37 41 57 47 47 41 57 45 53 37 42 53 53 53 53 45 52 45 57 53 50 39 52 50 32 53 45 53 57 53 38 27 42 53 35 52 45 57 39 53 40 52 57 57 46 38 34 52 26 57 57 41 43 53 35 53 38 57 57 50 50 42 32 38 40 40 30 57 57 57 52 39 52 50 42 42 42 50 40 53 30 50 42 33 57 50 50 30 27 53 25 57 57 38 22 53 44 28 52 57 53 31 36 24 36 33 40 53 57 57 46 28 48 48 37 29 27 37 30 39 27 44 33 53 34 41 41 57 57 47 30 37 31 36 36 29 30 57 57 47 29 32 36 33 25 33 40 30 33 32 30 32 30 25 30 24 40 44 51 51 39 34 38 34 30 41 34 29 48 35 48 39 51 51 38 39 31 39 24 37 29 30 25 44 28 35 34 51 46 36 18 51 34 24 24 29 27 29 29 33 30 19 29 29 23 29 24 19 27 35 31 51 13 12 30 21 39 46 46 32 22 34 34 16 14 12 24 7 20 24 32 30 19 29 33 29 28 26 22 28 36 22 23 39 27 25 39 21 28 19 33 21 15 23 28 22 51 36 29 21 28 29 20 22 21 10 23 17 11 6 28 14 26 28 28 14 17 51 22 25 19 27 28 22 27 41 26 30 12 32 8 10 26 31 51 10 14 16 28 25 6 6 10 15 17 34 32 19 51 51 26 21 19 20 29 17 29 27 13 28 51 51 19 15 11 38 51 12 15 27 24 21 28 23 31 13 31 12 15 25 29 16 23 26 19 34 18 24 8 11 21 29 44 11 24 15 19 8 5 6 26 33 19 25 7 14 8 22 9 7 12 7 15 16 18 11 12 6 5 12 37 20 14 17 12 12 6 4 1 5 33 22 7 16 22 6 7 4 1 3 7 21 15 5 6 4 14 37 5 3 3 6 11 4 6 14 6 3 24 6 5 10 16 14 17 9 24 11 27 18 4 8 23 17 13 8 4 6 3 2 4 12 7 4 5 4 14 25 23 5 3 4 7 7 4 4 5 5 4 3 4 11 23 6 9 5 6 6 7 3 6 14 20 8 20 22 14 8 8 5 4 8 18 4 3 9 4 5 13 8 13 17 10 9	Open. Hide. 31 55 35 38 61 61 61 38 18 31 19 20 20 19 12 55 34 41 49 55 55 55 52 55 55 55 55 55 49 59 59 61 59 61 61 59 59 59 59 59 59 59 59 59 59 59 61 59 59 59 59 43 43 36 33 37 35 49 52 61 59 59 59 59 59 59 59 59 59 43 43 61 59 59 59 59 59 61 59 59 59 59 61 59 59 59 59 61 61 59 61 61 61 61 61 59 59 59 59 61 59 59 59 59 59 55 55 59 52 59 59 59 61 59 59 61 61 59 59 55 61 61 61 61 59 61 61 61 59 61 61 59 59 59 59 61 59 55 59 61 59 59 61 61 61 59 61 59 59 59 59 41 61 59 59 59 59 61 61 59 59 61 59 61 59 61 59 61 61 61 61 59 61 61 61 59 59 59 61 61 61 59 59 59 61 61 61 61 61 61 59 61 61 61 59 59 61 61 59 61 59 59 61 59 59 61 59 59 55 61 61 61 61 61 59 59 61 59 59 59 59 59 61 61 59 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 49 61 61 59 61 61 61 59 59 61 59 55 61 55 49 52 55 55 55 55 55 55 55 55 61 55 61 49 61 61 61 55 55 55 55 55 61 55 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 55 55 61 61 52 61 61 61 61 61 61 61 55 55 61 61 61 61 55 55 61 55 61 55 55 61 61 55 55 55 50 61 61 55 61 55 61 55 55 61 55 61 61 55 55 55 50 55 50 50 55 55 50 55 61 61 61 61 61 61 61 50 55 50 55 52 50 50 61 61 47 50 61 61 50 50 53 53 50 50 50 50 43 50 61 61 61 50 50 43 61 61 61 61 61 61 61 61 61 53 61 61 61 52 61 37 53 61 52 53 61 61 61 61 53 61 52 53 50 61 61 61 61 61 61 61 61 53 61 61 53 61 61 38 47 61 53 61 52 61 61 61 61 61 61 61 61 57 57 53 57 57 57 53 53 57 57 53 53 46 53 57 47 57 57 57 53 57 57 53 47 57 57 53 53 57 57 47 53 52 57 57 57 57 57 53 53 53 52 53 53 53 57 53 53 47 57 57 53 47 57 57 57 57 47 47 57 57 50 43 52 57 50 57 57 52 52 47 47 42 53 57 52 38 46 30 53 46 50 57 53 52 39 47 53 50 53 46 43 53 43 57 46 46 45 53 57 43 53 52 50 31 52 52 53 53 52 38 52 52 52 40 43 53 46 41 37 38 57 34 34 53 53 38 30 35 38 50 36 36 53 57 53 30 37 43 53 53 50 38 46 30 20 52 40 25 32 50 57 46 28 46 31 37 42 40 47 36 46 38 40 35 37 40 31 23 34 43 34 38 31 40 28 46 31 33 33 37 32 40 41 52 41 27 20 34 37 24 37 29 57 53 29 43 19 20 41 25 23 25 32 18 31 23 57 40 34 48 41 37 47 45 28 29 33 41 32 57 45 37 35 57 46 31 16 22 30 25 46 30 35 47 39 27 30 48 43 32 28 33 30 28 44 44 30 29 32 39 51 47 23 30 33 41 27 44 14 44 31 20 23 47 28 41 21 21 45 30 29 34 29 46 47 11 8 45 31 32 29 24 23 29 30 29 28 30 24 27 24 48 51 19 12 36 23 20 30 33 21 15 35 31 36 35 26 27 28 31 38 28 20 29 33 27 31 15 29 24 30 29 28 24 28 46 33 20 19 26 34 23 38 28 30 18 24 29 25 27 33 35 29 28 29 34 30 51 20 19 39 25 15 14 28 33 31 27 10 7 6 32 22 27 23 34 26 24 28 25 23 25 31 27 21 14 28 14 30 18 29 23 43 51 24 11 20 36 24 30 36 15 32 18 23 22 46 33 20 17 34 20 17 25 31 25 31 36 34 31 28 19 24 28 14 28 19 31 35 15 32 15 30 22 28 28 20 18 18 44 51 25 20 27 21 22 22 22 28 38 8 6 10 19 8 18 25 26 15 28 36 23 24 13 16 27 15 23 44 25 23 29 31 35 19 23 31 31 23 34 15 24 14 7 6 23 44 22 12 17 23 31 23 6 17 17 19 44 44 27 11 4 15 25 13 18 11 32 10 27 31 16 5 7 9 28 25 6 13 13 29 35 12 6 5 11 33 9 20 29 16 33 11 14 42 9 22 16 17 30 11 29 10 23 14 8 6 4 4 14 9 6 4 6 15 6 6 26 30 9 25 11 31 10 9 26 8 9 24 6 10 30 42 25 5 5 13 5 8 11 5 24 11 14 19 11 26 5 20 24 23 23 8 5 4 4 3 4 11 6 13 8 14 22 18 4 21 9 20 6 3 6 3 6 7 10 19 5 8 4 4 8 7 6 8 26 24 10 11 6 5 4 2 25 18 4 7 5 10 7 5 27 19 8 9 6 2 2 8 16 8 7 4 13 10 18 21 4 7 4 3 2 4 13 17 7 6 24 21 4 11 14 3 5 13 24 15 11 25 27 9 15 10 6 4 2 3 9 14 12 6 6 8 12 3 3 3 3 5 3

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_110474002_110475179
seq2: B6Ng01-129K05.b_47_1207

seq1  GAATTCTATATACTATGAATAAAATTCCATTTACTAATTAGAGCCAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATATACTATGAATAAAATTCCATTTACTAATTAGAGCCAAAAT  50

seq1  TTTTTAAGGGGAGTCAGTTCTGTGGTTCTGAAGTTTTATTAATCTAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAGGGGAGTCAGTTCTGTGGTTCTGAAGTTTTATTAATCTAAGAT  100

seq1  TTTGCCTATAATATAATTAATGCAATGTGATAAAAAGTTATTTAAAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTATAATATAATTAATGCAATGTGATAAAAAGTTATTTAAAGAAA  150

seq1  AACCAAAAGGGCTAGGCTGTTTTCAAGTCTTCTGTGACATCCTGATATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAAGGGCTAGGCTGTTTTCAAGTCTTCTGTGACATCCTGATATAT  200

seq1  TGTATAAATTAACTTCAATATTCATCAAATGTACAATAATAGAATTAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAATTAACTTCAATATTCATCAAATGTACAATAATAGAATTAAGA  250

seq1  TTTCTGATTTTTACATCTTTTATTTTTAATATGTGATTTTATTAATAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGATTTTTACATCTTTTATTTTTAATATGTGATTTTATTAATAACT  300

seq1  ATAATTATTGCAAAATGAATAAATATTAGCTTTATGTCTTACAAACTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATTGCAAAATGAATAAATATTAGCTTTATGTCTTACAAACTACA  350

seq1  GTGCACAAAGACTGTGAGTTGATGTCTTTTGAATGTTAGGCCCATCTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACAAAGACTGTGAGTTGATGTCTTTTGAATGTTAGGCCCATCTTCA  400

seq1  TGGTTTGTTTATTAATGGGAACATTTTGTAGGAAAAGGATTCTTGTGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGTTTATTAATGGGAACATTTTGTAGGAAAAGGATTCTTGTGTTC  450

seq1  TCAACTGCAGAGAAGAGGGGTTATTCTCCCTAAATTATTTTTATTGATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTGCAGAGAAGAGGGGTTATTCTCCCTAAATTATTTTTATTGATGT  500

seq1  AGTATTAGTCAAGATATAGAATTATATAGTACATTAAAATAAAAAATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTAGTCAAGATATAGAATTATATAGTACATTAAAATAAAAAATTAA  550

seq1  ATAACAATTCACTATTGTACTGAATTTCAGTTTTGTTTCTTAAGTTTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAATTCACTATTGTACTGAATTTCAGTTTTGTTTCTTAAGTTTTTC  600

seq1  TGACAAAAGTATATGTGTGAATTTATCATTATGATTTTTGGTTAAATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAAGTATATGTGTGAATTTATCATTATGATTTTTGGTTAAATTTA  650

seq1  CAAGTAAAATGCTTATAGTGAAAAGACATCTGTATTTATGCATAGGGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAAAATGCTTATAGTGAAAAGACATCTGTATTTATGCATAGGGATA  700

seq1  CATAATAGTTTTGCCAAAGTCTATTTCTCATATAAAAATCTATATACATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATAGTTTTGCCAAAGTCTATTTCTCATATAAAAATCTATATACATA  750

seq1  TTTGCATAAAATTAGAAAGATCTGAAAATCTGCATACACACATGAAATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATAAAATTAGAAAGATCTGAAAATCTGCATACACACATGAAATCA  800

seq1  TCACCCCAATCATATCTATAACAATTTTCCTCCTCCTGTTTTGTGTATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCCAATCATATCTATAACAATTTTCCTCCTCCTGTTTTGTGTATGT  850

seq1  TTGAAAATTTAACTAGAAGTCACACGCTTTAAGAAAAATTAAGGATATAG  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTGAAAATTTAACTAGAAGTCACACGCTTTAAG-AAAATTAAGGATATAG  899

seq1  TACATAATGCTTATTATAGGCACTTTGTTGTACAGCAGATCTCTTAATCA  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TACATAATGCTTATTATAGGCACTTTGTTGTACAGCAGATCTCTT-ATCA  948

seq1  TCTTGTGCAACCAAAACACAGCCCACTGAAAAGCTGTTCATTTTC-TTTC  999
      |||||||| |||||||||||| ||||||||||||||||||||||| ||||
seq2  TCTTGTGC-ACCAAAACACAG-CCACTGAAAAGCTGTTCATTTTCTTTTC  996

seq1  TCCTCAGAACATAGCAGCTAACATTTCCCTCACTACTTGTGTGCGTTGCT  1049
      ||||||| |||||||||||||||||| |||||||||||||||||||||||
seq2  TCCTCAG-ACATAGCAGCTAACATTT-CCTCACTACTTGTGTGCGTTGCT  1044

seq1  CTGGGTTATCACATAAATGGAATGTGTCATGTTTCTCTTCTGTGGCTAGC  1099
      |||||||||  | |||||||||| ||||||||||  ||||||||||||||
seq2  CTGGGTTAT--CCTAAATGGAAT-TGTCATGTTTTCCTTCTGTGGCTAGC  1091

seq1  TTATTTTACTTAACTAATGTCTTCGAGTTTTCTCTATCTTCTGATATATG  1149
      ||| ||||| ||||||   |  ||||| |||||||||||||||| |||||
seq2  TTA-TTTAC-TAACTA---TTCTCGAG-TTTCTCTATCTTCTGA-ATATG  1134

seq1  ACAGAACTTTTGTCTGAATATTATTCCAT  1178
      |  |||| ||||||||||| |  ||||||
seq2  AACGAAC-TTTGTCTGAAT-TATTTCCAT  1161

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information