BAC Information

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BAC

Clone NameB6Ng01-129N02
ChromosomeX (Build37)
Map Location 126,673,591 - 126,823,768
singlet/doubletdoublet
Overlap geneDiap2
Upstream geneLOC100040550, LOC100040562, LOC100040570, LOC669120
Downstream geneLOC100040092, LOC665773, LOC665799
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129N02.bB6Ng01-129N02.g
ACCDH931304DH931305
length1,053951
definitionDH931304|Mus musculus domesticus DNA, BAC clone: B6Ng01-129N02, 5' end.DH931305|Mus musculus domesticus DNA, BAC clone: B6Ng01-129N02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,673,591 - 126,674,651)(126,823,091 - 126,823,768)
sequence
gaattcaataatgctcagaatttcagaacccagtggaagtcatgggaata
catgacccttaaataagaataattgtagttaattcatttaatgttgagac
tgtagatatggagctgatatatagtgagatattttattttgggaaaattt
tggaatatgcctcttatgataataaattgattctattttccattatttta
ttggaaattggagagttatatcacaatgaaagaaacttttcagggtgtat
aatacacgtggcagttaaaaggtatattgatattgtctaatttatgtttt
ttcaatatttctatatagatcaatagatagatcaacttccgtgtgactca
aattacattgtaaatgtcaccttatttactacttatgaattagttaaact
tttttgttctggtatatgagaagacatagactaacaatataagcatagtg
aataaagcagccaggctgttgccaaacaagaggccttctgtgtaattctc
cttctccaattatactttttaaatatatttccttaattcttccttctaac
ccacaaaatgcatatgtttactttgcatatatgcctcattataaaagcat
ttctaattataatgatctaggaagtagataaatttgaatgattattcatc
ttgtaaaggatagtatatagctttttgtgtgaacttccttcatgcaccca
caaattgattccatgcataggaaatgtagttaacctactttattcaaaga
gaattctatcatagaaaagagctatgtcagtactttaaatgtagatgtga
acactcatatgtatgattacaaaattagtgccttcaacgaaagtattaca
actcagctttttcctgcccaaggttaagtttaagaagtagagatcactca
tttcatgtttccttgaccacatctaatttggagacaaaaagcgagactat
tttctaatgtcacttgatagattcttatctccatttcccaggccagtggt
gcattacactgaataacgagggagggattgctactcaatattagaagcga
aca
gaattccagtgaatcctgtacacgatagctgagaaatgtgaagcaaagtg
atcagatgaaataatgtcagcctcttcagagttcagagaagtcactattt
taaagacacatcaactaccttcattccttcattccttcatgctctgtttc
tcctgattatgattgatggatatactacatagcatgggcataaactttcc
ctaaaactataaaaaaataagaaaataaagaaaaccccaagaataagaat
acatttatgatactttcgtcttgagagtctcagtctatactgaaatattt
tttcttcacgttaaagggtatagtagggcaaaatcctcctgtaaacccct
ctaaacaaatttcttggcttgaaaggattggtttcttactataaaatcca
actgattttacatctgtgatacctaatactctggttaggcaaaatcctct
ttgaattaggctatgagcacacaactttctggctactgtagagagattca
aggattccttctactatcattttggccagatagaggatgatggtgatgta
ggggtcctatgcattggagggtgtttgatggcatcttttccctccagcca
ctagatgcaattagcatctcttacaatgtggcaaccaaataagtctcttg
agtctaccaaatgtcacctgaagggcaaaaatacccagattgaggtttca
gaaagaaaattctgaaaacatgtgaccagaaagtattaatccttagatgg
gcacacataaaacctcttctaagactaaaggaatatctttatggcaatat
cagaatggaagaaagaccttaagtgcttgaagatatgaagaagggctgtg
aagccttgtcttatgggtttccagggatgccaccattagtgggttactca
gacaccagtgacagctttacttccatcccctcacaagcagcctgctaatc
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_126673591_126674651
seq2: B6Ng01-129N02.b_49_1101

seq1  GAATTCAATAATGCTCAGAATTTCAGAACCCAGTGGAAGTCATGGGAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAATGCTCAGAATTTCAGAACCCAGTGGAAGTCATGGGAATA  50

seq1  CATGACCCTTAAATAAGAATAATTGTAGTTAATTCATTTAATGTTGAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACCCTTAAATAAGAATAATTGTAGTTAATTCATTTAATGTTGAGAC  100

seq1  TGTAGATATGGAGCTGATATATAGTGAGATATTTTATTTTGGGAAAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATATGGAGCTGATATATAGTGAGATATTTTATTTTGGGAAAATTT  150

seq1  TGGAATATGCCTCTTATGATAATAAATTGATTCTATTTTCCATTATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATATGCCTCTTATGATAATAAATTGATTCTATTTTCCATTATTTTA  200

seq1  TTGGAAATTGGAGAGTTATATCACAATGAAAGAAACTTTTCAGGGTGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAATTGGAGAGTTATATCACAATGAAAGAAACTTTTCAGGGTGTAT  250

seq1  AATACACGTGGCAGTTAAAAGGTATATTGATATTGTCTAATTTATGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACGTGGCAGTTAAAAGGTATATTGATATTGTCTAATTTATGTTTT  300

seq1  TTCAATATTTCTATATAGATCAATAGATAGATCAACTTCCGTGTGACTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATATTTCTATATAGATCAATAGATAGATCAACTTCCGTGTGACTCA  350

seq1  AATTACATTGTAAATGTCACCTTATTTACTACTTATGAATTAGTTAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACATTGTAAATGTCACCTTATTTACTACTTATGAATTAGTTAAACT  400

seq1  TTTTTGTTCTGGTATATGAGAAGACATAGACTAACAATATAAGCATAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTCTGGTATATGAGAAGACATAGACTAACAATATAAGCATAGTG  450

seq1  AATAAAGCAGCCAGGCTGTTGCCAAACAAGAGGCCTTCTGTGTAATTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGCAGCCAGGCTGTTGCCAAACAAGAGGCCTTCTGTGTAATTCTC  500

seq1  CTTCTCCAATTATACTTTTTAAATATATTTCCTTAATTCTTCCTTCTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCAATTATACTTTTTAAATATATTTCCTTAATTCTTCCTTCTAAC  550

seq1  CCACAAAATGCATATGTTTACTTTGCATATATGCCTCATTATAAAAGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAAATGCATATGTTTACTTTGCATATATGCCTCATTATAAAAGCAT  600

seq1  TTCTAATTATAATGATCTAGGAAGTAGATAAATTTGAATGATTATTCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATTATAATGATCTAGGAAGTAGATAAATTTGAATGATTATTCATC  650

seq1  TTGTAAAGGATAGTATATAGCTTTTTGTGTGAACTTCCTTCATGCACCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAGGATAGTATATAGCTTTTTGTGTGAACTTCCTTCATGCACCCA  700

seq1  CAAATTGATTCCATGCATAGGAAATGTAGTTAACCTACTTTATTCAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGATTCCATGCATAGGAAATGTAGTTAACCTACTTTATTCAAAGA  750

seq1  GAATTCTATCATAGAAAAGAGCTATGTCAGTACTTTAAATGTAGATGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCATAGAAAAGAGCTATGTCAGTACTTTAAATGTAGATGTGA  800

seq1  ACACTCATATGTATGATTACAAAATTAGTGCCTTCAACGAAAGTATTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCATATGTATGATTACAAAATTAGTGCCTTCAACGAAAGTATTACA  850

seq1  ACTCAGCTTTTTCCTGCCCAAGGTTAAGTTTAAGAAGTAGAGATCACTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCTTTTTCCTGCCCAAGGTTAAGTTTAAGAAGTAGAGATCACTCA  900

seq1  TTTCATGTTTTCCTTGACCACATCTAATTTGGAGACAAAAAGCGAGACTA  950
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATG-TTTCCTTGACCACATCTAATTTGGAGACAAAAAGCGAGACTA  949

seq1  TTTTCTAATGTCACTTGATTAGATTCTTATCTCCATTTCCCAAGCCAGT-  999
      |||||||||||||||||| ||||||||||||||||||||||| |||||| 
seq2  TTTTCTAATGTCACTTGA-TAGATTCTTATCTCCATTTCCCAGGCCAGTG  998

seq1  GTGCATTTACACTTGAATATAGGAGGGGAGGGGATTTGCTACTCAATATT  1049
      ||||| |||||| |||||| | || |||||||   |||||||||||||||
seq2  GTGCA-TTACAC-TGAATA-ACGA-GGGAGGG--ATTGCTACTCAATATT  1042

seq1  CAGAAGCAAACA  1061
       |||||| ||||
seq2  -AGAAGCGAACA  1053

seq1: chrX_126823091_126823768
seq2: B6Ng01-129N02.g_66_743 (reverse)

seq1  TTGCCCTTCAGGTGACATTTGGTAGACTCAAGAGACTTATTTGGTTGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCTTCAGGTGACATTTGGTAGACTCAAGAGACTTATTTGGTTGCCA  50

seq1  CATTGTAAGAGATGCTAATTGCATCTAGTGGCTGGAGGGAAAAGATGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTAAGAGATGCTAATTGCATCTAGTGGCTGGAGGGAAAAGATGCCA  100

seq1  TCAAACACCCTCCAATGCATAGGACCCCTACATCACCATCATCCTCTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACACCCTCCAATGCATAGGACCCCTACATCACCATCATCCTCTATC  150

seq1  TGGCCAAAATGATAGTAGAAGGAATCCTTGAATCTCTCTACAGTAGCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAAAATGATAGTAGAAGGAATCCTTGAATCTCTCTACAGTAGCCAG  200

seq1  AAAGTTGTGTGCTCATAGCCTAATTCAAAGAGGATTTTGCCTAACCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTGTGTGCTCATAGCCTAATTCAAAGAGGATTTTGCCTAACCAGAG  250

seq1  TATTAGGTATCACAGATGTAAAATCAGTTGGATTTTATAGTAAGAAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGGTATCACAGATGTAAAATCAGTTGGATTTTATAGTAAGAAACCA  300

seq1  ATCCTTTCAAGCCAAGAAATTTGTTTAGAGGGGTTTACAGGAGGATTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTCAAGCCAAGAAATTTGTTTAGAGGGGTTTACAGGAGGATTTTG  350

seq1  CCCTACTATACCCTTTAACGTGAAGAAAAAATATTTCAGTATAGACTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACTATACCCTTTAACGTGAAGAAAAAATATTTCAGTATAGACTGAG  400

seq1  ACTCTCAAGACGAAAGTATCATAAATGTATTCTTATTCTTGGGGTTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCAAGACGAAAGTATCATAAATGTATTCTTATTCTTGGGGTTTTCT  450

seq1  TTATTTTCTTATTTTTTTATAGTTTTAGGGAAAGTTTATGCCCATGCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCTTATTTTTTTATAGTTTTAGGGAAAGTTTATGCCCATGCTAT  500

seq1  GTAGTATATCCATCAATCATAATCAGGAGAAACAGAGCATGAAGGAATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTATATCCATCAATCATAATCAGGAGAAACAGAGCATGAAGGAATGA  550

seq1  AGGAATGAAGGTAGTTGATGTGTCTTTAAAATAGTGACTTCTCTGAACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGAAGGTAGTTGATGTGTCTTTAAAATAGTGACTTCTCTGAACTC  600

seq1  TGAAGAGGCTGACATTATTTCATCTGATCACTTTGCTTCACATTTCTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGGCTGACATTATTTCATCTGATCACTTTGCTTCACATTTCTCAG  650

seq1  CTATCGTGTACAGGATTCACTGGAATTC  678
      ||||||||||||||||||||||||||||
seq2  CTATCGTGTACAGGATTCACTGGAATTC  678