BAC Information

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BAC

Clone NameB6Ng01-131C02
ChromosomeX (Build37)
Map Location 109,737,744 - 109,738,937
singlet/doubletsinglet
Overlap geneZfp711
Upstream geneD030011N01Rik, LOC100038989, Tex16, LOC622570, 4933403O08Rik, EG385407, Apool, Satl1, EG623341, 2010106E10Rik
Downstream genePof1b, LOC623412, EG623428, LOC100039112, Chm, EG664918, Dach2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131C02.bB6Ng01-131C02.g
ACCDH932267DH932268
length1,1661,179
definitionDH932267|Mus musculus domesticus DNA, BAC clone: B6Ng01-131C02, 5' end.DH932268|Mus musculus domesticus DNA, BAC clone: B6Ng01-131C02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttaactgaggaataccgaatggctgagaagcacctaaaagaaat
gttcaacatcctcagtcattggggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaactcaggtgagag
cagatgctggtgaggttttggagaaggaggaatactcctccattgttggt
gagattgcaagcttgtacaacaactctggaaatcagtctttcggttcctc
agaaaattggacataatactaccagaggatccagcaatatctctcctggg
aatatatccagaacatgttccaactggtaataagaacacatgctccacta
ttttcatagcaaccttatttataatagctagaagctggaaagaacccaga
tgtccctcaacagaggaatagatacagaacatgtggtacatttacacaat
ggagtactactcagctattaaaaacaatgaatttatgaaatttctaggca
catggatggatatggagggtatcatcctgagtgaggtgacccaatcacaa
gaattcatatgatatgcactcactgataagtgggtattagcccagaaact
tagaatacccaagatacaatttgcaaaacacatgaaactcaagaaggaag
accaaggtgtagacacttcgcccctccttagaattgggaacaaaacaccc
atggaaggagttacagagacaaagtttggagctgagacaaaaagatggat
catccagaaacttccccacctgggggtacatcccataatcagccaccaaa
agcagacactattgtataaaccagcaataatttgctgaaaggactctgat
atagctgtctcttgtgaggctatgccagtgcctggcaaacacagaagtgg
atgctcacagtcatctaaaggatgggacacagggccccaatggaggagct
agagaaagtacccaagtagctgaagggatctgcaaccttatagtggaaca
acaatatgaactacctgtaaccccaagctcatgtttctgctgcatatgta
cacctagtcgtccatcatcggcagagaggccattggcattgcaactttaa
tgcccaatcatggaaacccagccataaggtcaaatgggtgtaggaaacgg
gcgtggggaagggtta
gaattcttatctttcatggggattattctaaaattctcaaaagacaaaaa
atattcataggcttcttaagtgtatttttaaaactgtatatgaatatcta
catataaagtgggaatgggaaaaatgtcactcagatttttttcagatatg
aaactattatggcagaaaattttcaaacaaatgaaaataatttgaattag
agaaaaaattatgatgggtgtgtaagagcattgaagacagaggaagatat
tttgtattttaaacctacttctagcacttaactgagaaaaatcctcaata
acttttatgttcttctacttccttgtgtcctcatctgtatgatggccata
atggcaatggtacaataaggtttttatgagaaatgaatgggtaaatatgt
atgaaatttttgtagtgcttgtcatataaatatggtatagctgttaactg
aaatgaatgatgaatgtctaaggtataatttacatgcatattttaatggc
actttgaagtttgttagaatatttatataccctgtatatccttattaatt
cggggatttattccatgatatattttgagtttatatgtgtttttaaattt
taaggtgggacagaaattgtcacagagagtgaatacagcagtggccattc
tgtagctggagtgcttgaccagagccgaatgcagcgagagaaaatggttt
acatggcagtgaaagattcttcccaggaacaggatgatatcagtaagata
aagggcactgtagtgacttacaagaaacactaacacaactttaaatgcaa
ttgatagcaaccatagatgcactgaatatcagctacgttaaaagcaataa
gcctgttcttgcaaatatttaaaagtatgggtccttttagacattcctga
accaatatattattactcagatagatacatgaacaatacatctcaagtca
ttttgttacaaagcgatgagagtttatagttttgatgtaatgagtcaaaa
taatagaaattgaatcaattattaatttatattatagaaatgttgtagtg
ccacataaatcacaagcatacagacacataggctaaatttagaaatttca
tattctgtaagttaatttcatttaatattaatctctgaggtgaagattat
tttcttttttatagacaagaaatcctcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_109737744_109738937
seq2: B6Ng01-131C02.g_66_1244

seq1  GAATTCTTATCTTTCATGGGGATTATTCTAAAATTCTCAAAAGACAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATCTTTCATGGGGATTATTCTAAAATTCTCAAAAGACAAAAA  50

seq1  ATATTCATAGGCTTCTTAAGTGTATTTTTAAAACTGTATATGAATATCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCATAGGCTTCTTAAGTGTATTTTTAAAACTGTATATGAATATCTA  100

seq1  CATATAAAGTGGGAATGGGAAAAATGTCACTCAGATTTTTTTCAGATATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAAGTGGGAATGGGAAAAATGTCACTCAGATTTTTTTCAGATATG  150

seq1  AAACTATTATGGCAGAAAATTTTCAAACAAATGAAAATAATTTGAATTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATTATGGCAGAAAATTTTCAAACAAATGAAAATAATTTGAATTAG  200

seq1  AGAAAAAATTATGATGGGTGTGTAAGAGCATTGAAGACAGAGGAAGATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAATTATGATGGGTGTGTAAGAGCATTGAAGACAGAGGAAGATAT  250

seq1  TTTGTATTTTAAACCTACTTCTAGCACTTAACTGAGAAAAATCCTCAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTTTAAACCTACTTCTAGCACTTAACTGAGAAAAATCCTCAATA  300

seq1  ACTTTTATGTTCTTCTACTTCCTTGTGTCCTCATCTGTATGATGGCCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTATGTTCTTCTACTTCCTTGTGTCCTCATCTGTATGATGGCCATA  350

seq1  ATGGCAATGGTACAATAAGGTTTTTATGAGAAATGAATGGGTAAATATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAATGGTACAATAAGGTTTTTATGAGAAATGAATGGGTAAATATGT  400

seq1  ATGAAATTTTTGTAGTGCTTGTCATATAAATATGGTATAGCTGTTAACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTTTTGTAGTGCTTGTCATATAAATATGGTATAGCTGTTAACTG  450

seq1  AAATGAATGATGAATGTCTAAGGTATAATTTACATGCATATTTTAATGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATGATGAATGTCTAAGGTATAATTTACATGCATATTTTAATGGC  500

seq1  ACTTTGAAGTTTGTTAGAATATTTATATACCCTGTATATCCTTATTAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGAAGTTTGTTAGAATATTTATATACCCTGTATATCCTTATTAATT  550

seq1  CGGGGATTTATTCCATGATATATTTTGAGTTTATATGTGTTTTTAAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGATTTATTCCATGATATATTTTGAGTTTATATGTGTTTTTAAATTT  600

seq1  TAAGGTGGGACAGAAATTGTCACAGAGAGTGAATACAGCAGTGGCCATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTGGGACAGAAATTGTCACAGAGAGTGAATACAGCAGTGGCCATTC  650

seq1  TGTAGCTGGAGTGCTTGACCAGAGCCGAATGCAGCGAGAGAAAATGGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTGGAGTGCTTGACCAGAGCCGAATGCAGCGAGAGAAAATGGTTT  700

seq1  ACATGGCAGTGAAAGATTCTTCCCAGGAACAGGATGATATCAGTAAGATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGCAGTGAAAGATTCTTCCCAGGAACAGGATGATATCAGTAAGATA  750

seq1  AAGGGCACTGTAGTGACTTACAAGAAACACTAACACAACTTTAAATGCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCACTGTAGTGACTTACAAGAAACACTAACACAACTTTAAATGCAA  800

seq1  TTGATAGCAACCATAGATGCACTGAATATCAGCTACGTTAAAAGCAATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAGCAACCATAGATGCACTGAATATCAGCTACGTTAAAAGCAATAA  850

seq1  GCCTGTTCTTGCAAATATTTAAAAGTATGGGTCCTTTTAGACATTCCTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTTCTTGCAAATATTTAAAAGTATGGGTCCTTTTAGACATTCCTGA  900

seq1  ACCAATATATTATTACTCAGATAAGAATACATGAACAATACATCTCAAGT  950
      |||||||||||||||||||||||   ||||||||||||||||||||||||
seq2  ACCAATATATTATTACTCAGATA--GATACATGAACAATACATCTCAAGT  948

seq1  CA-TATGTTACAAAGCGATGAAGAGTTTATAGTTTTGATGTAATGAAGTT  999
      || | ||||||||||||||| |||||||||||||||||||||||||   |
seq2  CATTTTGTTACAAAGCGATG-AGAGTTTATAGTTTTGATGTAATGA--GT  995

seq1  CAAAATACATAGAAATTGAATCATATATTAAATATATATTATAGACATG-  1048
      ||||||| |||||||||||||||  |||| ||| ||||||||||| ||| 
seq2  CAAAATA-ATAGAAATTGAATCAATTATT-AATTTATATTATAGAAATGT  1043

seq1  TGTAGTG-CACATAAATTCACAAGGCATACAGACACATAGGCATAAATTT  1097
      ||||||| |||||||| |||||| |||||||||||||||||| |||||||
seq2  TGTAGTGCCACATAAA-TCACAA-GCATACAGACACATAGGC-TAAATTT  1090

seq1  AGAAATATTTATA-TCTGTTAAGTTTTATTTCATTTTAATAATTAATCTC  1146
      |||||| || ||| |||| |||| || |||||| |||||| |||||||||
seq2  AGAAAT-TTCATATTCTG-TAAG-TTAATTTCA-TTTAAT-ATTAATCTC  1135

seq1  TGAGGTAGAAAGTATTATTCCTTTTTTATAAGACAAGTAAATCCTCAG  1194
      ||||||  | | |||  || ||||||||| ||||||| ||||||||||
seq2  TGAGGTGAAGATTAT--TTTCTTTTTTAT-AGACAAG-AAATCCTCAG  1179