BAC Information

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BAC

Clone NameB6Ng01-132K14
ChromosomeX (Build37)
Map Location 93,175,921 - 93,177,053
singlet/doubletsinglet
Overlap genenone
Upstream geneGm371, 9630042H07Rik, Arhgef9, LOC619688, LOC100042189, 2810002O09Rik, Asb12, LOC668202, AK129302, A130028J20Rik, 1700010D01Rik, Las1l
Downstream geneMsn, Psmb7-ps1, LOC668221, Vsig4, B230358A15Rik, Heph, Gpr165, LOC675824, LOC668234, EG668236
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132K14.bB6Ng01-132K14.g
ACCDH933407DH933408
length1,111977
definitionDH933407|Mus musculus domesticus DNA, BAC clone: B6Ng01-132K14, 5' end.DH933408|Mus musculus domesticus DNA, BAC clone: B6Ng01-132K14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttctaaattaaaatgaaaaattttgttttctttttattgattg
attgattgattgattacttgattgattgagacagggtttcctgtattccg
gactgtgaactctgtatatagcagaagataacattaaacttctgatcctc
ttggatgttgagattacaggattaaactcagggcttcttgcgcctcccaa
actacatctataggtccaaattttctcatttcctaaaaaatcatgtttag
agtcaccattttgtagagaggaaggccctggtacaggcagacaaaaaaat
cacagatttagaaaatttggcaaactgtttttctgggttcctcctggccc
ctctgtcctgagacctgtctgaggagtttaaggcctgactaggacacgtt
tacctaaagatatgggcctgtcaacttccctgtctttgttcaaactgacc
aaccctaaaattaggagaagacccttattccagcccaacaaatactctta
aaagccccagcatgagacgagaggcagagctttggcttcctgggtgtccc
ctctgctttgtaggaggtctctgtctccgtgtcccttgctgggcctgtgc
acatcttcacctttaacaaaagtattttccatctgttctgcctgctgttg
tgtctgagatccccccccccccgctgttatcagttgtgcttgagattttt
ttctgccttttaattacttagcttgcagagaaaaatgacaaagctggccc
aaacacctagagagtaataaggaactgaagaggtggttccagacttgaac
atttaaaagaggaggtggggagtgagttttgcactcatgttttcctgaat
tctaatttcatgttcttgtcaatgtatctgtgatcactgagagcttattt
aattaattgctgtatacacacacacatacacacacacacacaaacacact
cacacacagtccctcctcatctctctccttctctctgagaggtaggactt
gcctccctgagtatcactattctggtgcaataactctgcgggtagtgcat
gctcttcgctgagccacacaggcagcaagttagaaatagcaaactctgtt
tgggggaacca
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctgacaaggatttggagaaagaggaacactcctccattgctggtg
ggattgcaagcatgtcaaccactctggaagtcagtatggaggttcctcag
aaaattggacataatactaccagaggatccagcaatagctctcatgggca
tataatcagaagacgttccaactggtaataagaacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
tccctcagcagaagaatggatacagaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaacaatgaatttatgaaattcttggacaaa
tggatgtatctggaggatatcatccttagtgaggtaacccaatcacaaaa
gaagtcattagatacacactcactgataagtggatattagcccagaaaca
tagaacacccaagatacagtttgcaaaacacaagaaaatccagaagaggg
aagaccaatgggtggatatgtcatccctccttagaataaggaacaaaata
cccatgaaaggagttagacagttttggagctaaaatgaaagaatgcacta
tccagagactgccccacccaggggtccatcccataatcagccaccaaacc
cagacactattgcatatgccagcaagatttgctgaacggaccctgatata
gccgtcctctgtgaggctaagccattgcctggcaaatacaccactggatg
ctcacagtcatctgtaaaaggtcatatgggccttcattgaaagtagaaaa
agacccagagctaaagggttgcatcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_93175921_93177053
seq2: B6Ng01-132K14.b_47_1157 (reverse)

seq1  TGGTTCCCCCAAAACAGGAGTTTGGGCTATTTCTAAAACTGCTGCCTTGT  50
      |||||||||| ||||| ||||||  ||||||||| ||  ||||||| |||
seq2  TGGTTCCCCC-AAACA-GAGTTT--GCTATTTCT-AACTTGCTGCC-TGT  44

seq1  GTGGCCTCAGCGGAAGAGCATGCACCTAACCCCGCAGAGTTATTGCACCA  100
      |||| |||||| |||||||||||| |||  ||||||||||||||||||||
seq2  GTGG-CTCAGC-GAAGAGCATGCA-CTA--CCCGCAGAGTTATTGCACCA  89

seq1  GAATAGGTGGATACTTCAGGGAGGGCAGGTCCTACCCTCTCAGAGGAGAA  150
      ||||||   ||||| ||||||| |||| |||||| ||||||||| |||||
seq2  GAATAG--TGATAC-TCAGGGA-GGCAAGTCCTA-CCTCTCAGA-GAGAA  133

seq1  GGGAAGAGAGGATGGAGGGAGGGACTGTGTGTGAGTGTGTTTGTGTGTGT  200
      ||  ||||| ||     |||||||||||||||||||||||||||||||||
seq2  GGAGAGAGATGA-----GGAGGGACTGTGTGTGAGTGTGTTTGTGTGTGT  178

seq1  GTGTGTATGTGTGTGTGTATACAGCAATTAATTAAATAAGCTCTCAGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTATGTGTGTGTGTATACAGCAATTAATTAAATAAGCTCTCAGTGA  228

seq1  TCACAGATACATTGACAAGAACATGAAATTAGAATTCAGGAAAACATGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGATACATTGACAAGAACATGAAATTAGAATTCAGGAAAACATGAG  278

seq1  TGCAAAACTCACTCCCCACCTCCTCTTTTAAATGTTCAAGTCTGGAACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAACTCACTCCCCACCTCCTCTTTTAAATGTTCAAGTCTGGAACCA  328

seq1  CCTCTTCAGTTCCTTATTACTCTCTAGGTGTTTGGGCCAGCTTTGTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCAGTTCCTTATTACTCTCTAGGTGTTTGGGCCAGCTTTGTCATT  378

seq1  TTTCTCTGCAAGCTAAGTAATTAAAAGGCAGAAAAAAATCTCAAGCACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGCAAGCTAAGTAATTAAAAGGCAGAAAAAAATCTCAAGCACAA  428

seq1  CTGATAACAGCGGGGGGGGGGGGATCTCAGACACAACAGCAGGCAGAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAACAGCGGGGGGGGGGGGATCTCAGACACAACAGCAGGCAGAACA  478

seq1  GATGGAAAATACTTTTGTTAAAGGTGAAGATGTGCACAGGCCCAGCAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAAAATACTTTTGTTAAAGGTGAAGATGTGCACAGGCCCAGCAAGG  528

seq1  GACACGGAGACAGAGACCTCCTACAAAGCAGAGGGGACACCCAGGAAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACGGAGACAGAGACCTCCTACAAAGCAGAGGGGACACCCAGGAAGCC  578

seq1  AAAGCTCTGCCTCTCGTCTCATGCTGGGGCTTTTAAGAGTATTTGTTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCTGCCTCTCGTCTCATGCTGGGGCTTTTAAGAGTATTTGTTGGG  628

seq1  CTGGAATAAGGGTCTTCTCCTAATTTTAGGGTTGGTCAGTTTGAACAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATAAGGGTCTTCTCCTAATTTTAGGGTTGGTCAGTTTGAACAAAG  678

seq1  ACAGGGAAGTTGACAGGCCCATATCTTTAGGTAAACGTGTCCTAGTCAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGAAGTTGACAGGCCCATATCTTTAGGTAAACGTGTCCTAGTCAGG  728

seq1  CCTTAAACTCCTCAGACAGGTCTCAGGACAGAGGGGCCAGGAGGAACCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAACTCCTCAGACAGGTCTCAGGACAGAGGGGCCAGGAGGAACCCA  778

seq1  GAAAAACAGTTTGCCAAATTTTCTAAATCTGTGATTTTTTTGTCTGCCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACAGTTTGCCAAATTTTCTAAATCTGTGATTTTTTTGTCTGCCTG  828

seq1  TACCAGGGCCTTCCTCTCTACAAAATGGTGACTCTAAACATGATTTTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGGGCCTTCCTCTCTACAAAATGGTGACTCTAAACATGATTTTTTA  878

seq1  GGAAATGAGAAAATTTGGACCTATAGATGTAGTTTGGGAGGCGCAAGAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGAGAAAATTTGGACCTATAGATGTAGTTTGGGAGGCGCAAGAAG  928

seq1  CCCTGAGTTTAATCCTGTAATCTCAACATCCAAGAGGATCAGAAGTTTAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGTTTAATCCTGTAATCTCAACATCCAAGAGGATCAGAAGTTTAA  978

seq1  TGTTATCTTCTGCTATATACAGAGTTCACAGTCCGGAATACAGGAAACCC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATCTTCTGCTATATACAGAGTTCACAGTCCGGAATACAGGAAACCC  1028

seq1  TGTCTCAATCAATCAAGTAATCAATCAATCAATCAATCAATAAAAAGAAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAATCAATCAAGTAATCAATCAATCAATCAATCAATAAAAAGAAA  1078

seq1  ACAAAATTTTTCATTTTAATTTAGAAGGAATTC  1133
      |||||||||||||||||||||||||||||||||
seq2  ACAAAATTTTTCATTTTAATTTAGAAGGAATTC  1111