BAC Information

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BAC

Clone NameB6Ng01-133A23
ChromosomeX (Build37)
Map Location 132,790,205 - 132,927,363
singlet/doubletdoublet
Overlap geneNgfrap1, LOC666180, LOC237048, LOC666196
Upstream geneEG621322, Pramel3, EG621352, EG331529, EG621380, EG666040, EG666045, AV320801, EG621467, Nxf7, 4930534P07Rik, 1700008I05Rik, 1700129I15Rik, Gprasp1, Gprasp2, Bhlhb9, LOC100041110, 2900062L11Rik, 6530401D17Rik, Bex2, Nxf3, Bex4, Tceal8, Tceal5, Bex1, LOC100040972, Wbp5
Downstream geneKir3dl2, LOC100041079, Kir3dl1, Tceal3, Tceal1, Morf4l2, BC065397, Glra4, LOC100041122, Plp1, Rab9b, 1700014N06Rik, LOC621984, LOC100034363, 4930488E11Rik, LOC666244, 2810402A17Rik, Zcchc18, BC031748, LOC666277, LOC436231, LOC666288, LOC100041260, LOC100041272, LOC669737, Esx1, EG666303
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133A23.bB6Ng01-133A23.g
ACCDH933711DH933712
length1,1621,128
definitionDH933711|Mus musculus domesticus DNA, BAC clone: B6Ng01-133A23, 5' end.DH933712|Mus musculus domesticus DNA, BAC clone: B6Ng01-133A23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,926,194 - 132,927,363)(132,790,205 - 132,791,360)
sequence
gaattcatccaattttcaccagatacctctggagaatttcatgagtttga
aagttgcactctgagcctgtgtataggatacagacagggagggtaccagg
aaaagaaaaggtctcatttccactgtatgtttcattccctggcattgctg
tgtgtctctgcagggttgtgtgatgagctaggaagagaaaggcatcgtgt
ataccttccactgaaatagtctgctgcgacaagacaccatcattccctcc
tctgggttttagatgctttttcctcctgatttcctctacgtcatgtgttt
atttctctgtgtattaccatccagtgtgacagagaacggtttgatctctg
catcccagaagcaggagctcattggggagaatgcagcatcctatacagtc
tcccagccagatagagtgaaaagaaatgtggatgcaggttactttccttc
caccatacttatctactcaataggttaactatatctttaatgctcatctg
aagacttttgaggttcagtgggattccatgtgtaaaaacaccctgccatc
tcaaacagatggaggggccaatgcacttggaattaattttattatatcat
gattcccaaaactcatagatgttagattagtggtcctcacatgtggtgca
tgtgtgctgcattcccaggtctttctggtgtcattgtcactattgttctt
tcacaatcctcccatggagaggtgagtttgtgctacacaggcttatgccc
caggagggtagcacttccaacaacttccttagggaacttttgaaaatgct
aaagtaacacacacacacacacacacacatacacacacacacactaacac
acacactagttaatttgaaattgacctggctacttcaaagtctagacact
cctaaaccttcccctgctgccctggcccaatcaggaagtagccagttgac
acccaaaattatacatggctggttggctttatctcctgaacctcctatgt
ccatacatacatcctctcttttccccctaagtcatggtaatcctttctct
ccctcctacttcctagccctgacaaacactatgctgaagaccaattccat
caatgtccctggcatctaatatgatcattaaaccccactgggagacaaga
acatgtaatttt
gaattcactcaacaagcatgctgacttcagatgttatctgctagcattcc
caggtgtcttaccttaaaggcttagtggagactagatgtctactcagctt
actgataacattccaggagttttacctaatggcggggaggatgttaagac
agacgtgcaagctgaaaaatatatggccatttaagggacaaagataacca
agataatattgtccctttgacctacagcattccagcccttcacaatgagg
gcattcctgcattccagtcctttgacaaaaaccagtcagcgggactgttc
tagacacagcactgttgggaaactttgctctacattgctcatcctaggga
tccatatcttcaataaaataaaataaaataaaataaaataaaatagaata
agcagggaaccagcattctctgtgaggaggttggatgcacaaaggagtcc
ctaccttttggttgcactcactcagcattcaactttagtcaagggtcagc
agtgccaggctgagcaatgctgatatccttcccttcccaagcagagagtt
ccagatttgaggttacactgtgcttgttctcaattacttggcagaatgca
gtttttgacccccaaactcagctaggaattttggtggcctagatcaactg
ccacatatttctccccattttctaattttttaagatttatttatttgtta
tatgcaagtacactgtagctgtcttcagacaccccagaagagggcaccgg
atctcaaaacatgtggttgctggaatttgaactcaggaccctcggaagag
cagtcagtactcttaaccactgagccatctctccagccccctctccccat
ttttctataaattgtgttgaatacagattttggtgttgtaggtttttgtt
tattttgttttttccaggacaggtttctctgtgtagcctggctgtcctga
actcactctgtaaacaagctagcctcaagtcacagaaggtccactgctct
gctctagtgctggtataaaggaaattcaccaccatgctggcaataatata
gaatacccttttaatcaatttaaataggtggagtggttatgccctgttca
tgggaccatactgtttactgcaaggctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_132926194_132927363
seq2: B6Ng01-133A23.b_46_1207 (reverse)

seq1  AAAATTACATGTCCTTGTCTCCAGTTGGGTTTTAATTGATCAATATAGAT  50
      |||||||||||| |||||||||   |||| ||||| ||||||   |||||
seq2  AAAATTACATGTTCTTGTCTCCCAGTGGGGTTTAA-TGATCATATTAGAT  49

seq1  GCCAGCGACAAATTGATGGAAATTGGTCATCAGCCATAGTG-TTGTCAGG  99
      ||||| |||  |||||||| |||||||| |||| ||||||| ||||||||
seq2  GCCAGGGAC--ATTGATGG-AATTGGTCTTCAG-CATAGTGTTTGTCAGG  95

seq1  GCTAGGAAGTAGGAGGGAGAAGAAAGGAATTACCATGACTTAGGGGGAAA  149
      ||||||||||||||||||| ||||||| ||||||||||||||||||||||
seq2  GCTAGGAAGTAGGAGGGAG-AGAAAGG-ATTACCATGACTTAGGGGGAAA  143

seq1  AGAGAAGGATGTATGTATGGACATAGGAGGTTCAGGAGATAAAGCCAACC  199
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAG-AGGATGTATGTATGGACATAGGAGGTTCAGGAGATAAAGCCAACC  192

seq1  AGCCATGTATAATTTTGGGTGTCAACTGGCTACTTCCCTGATTGGGCCAG  249
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGCCATGTATAATTTTGGGTGTCAACTGGCTACTT-CCTGATTGGGCCAG  241

seq1  GGCAGCAGGGGAAGGTTTAGGAGTGTCTAGACTTTGAAGTAGCCAGGTCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCAGGGGAAGGTTTAGGAGTGTCTAGACTTTGAAGTAGCCAGGTCA  291

seq1  ATTTCAAATTAACTAGTGTGTGTGTTAGTGTGTGTGTGTGTATGTGTGTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAATTAACTAGTGTGTGTGTTAGTGTGTGTGTGTGTATGTGTGTG  341

seq1  TGTGTGTGTGTGTGTTACTTTAGCATTTTCAAAAGTTCCCTAAGGAAGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTTACTTTAGCATTTTCAAAAGTTCCCTAAGGAAGTT  391

seq1  GTTGGAAGTGCTACCCTCCTGGGGCATAAGCCTGTGTAGCACAAACTCAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAAGTGCTACCCTCCTGGGGCATAAGCCTGTGTAGCACAAACTCAC  441

seq1  CTCTCCATGGGAGGATTGTGAAAGAACAATAGTGACAATGACACCAGAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCATGGGAGGATTGTGAAAGAACAATAGTGACAATGACACCAGAAA  491

seq1  GACCTGGGAATGCAGCACACATGCACCACATGTGAGGACCACTAATCTAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGGGAATGCAGCACACATGCACCACATGTGAGGACCACTAATCTAA  541

seq1  CATCTATGAGTTTTGGGAATCATGATATAATAAAATTAATTCCAAGTGCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATGAGTTTTGGGAATCATGATATAATAAAATTAATTCCAAGTGCA  591

seq1  TTGGCCCCTCCATCTGTTTGAGATGGCAGGGTGTTTTTACACATGGAATC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCCCTCCATCTGTTTGAGATGGCAGGGTGTTTTTACACATGGAATC  641

seq1  CCACTGAACCTCAAAAGTCTTCAGATGAGCATTAAAGATATAGTTAACCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAACCTCAAAAGTCTTCAGATGAGCATTAAAGATATAGTTAACCT  691

seq1  ATTGAGTAGATAAGTATGGTGGAAGGAAAGTAACCTGCATCCACATTTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTAGATAAGTATGGTGGAAGGAAAGTAACCTGCATCCACATTTCT  741

seq1  TTTCACTCTATCTGGCTGGGAGACTGTATAGGATGCTGCATTCTCCCCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTCTATCTGGCTGGGAGACTGTATAGGATGCTGCATTCTCCCCAA  791

seq1  TGAGCTCCTGCTTCTGGGATGCAGAGATCAAACCGTTCTCTGTCACACTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCCTGCTTCTGGGATGCAGAGATCAAACCGTTCTCTGTCACACTG  841

seq1  GATGGTAATACACAGAGAAATAAACACATGACGTAGAGGAAATCAGGAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTAATACACAGAGAAATAAACACATGACGTAGAGGAAATCAGGAGG  891

seq1  AAAAAGCATCTAAAACCCAGAGGAGGGAATGATGGTGTCTTGTCGCAGCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCATCTAAAACCCAGAGGAGGGAATGATGGTGTCTTGTCGCAGCA  941

seq1  GACTATTTCAGTGGAAGGTATACACGATGCCTTTCTCTTCCTAGCTCATC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATTTCAGTGGAAGGTATACACGATGCCTTTCTCTTCCTAGCTCATC  991

seq1  ACACAACCCTGCAGAGACACACAGCAATGCCAGGGAATGAAACATACAGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACCCTGCAGAGACACACAGCAATGCCAGGGAATGAAACATACAGT  1041

seq1  GGAAATGAGACCTTTTCTTTTCCTGGTACCCTCCCTGTCTGTATCCTATA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGAGACCTTTTCTTTTCCTGGTACCCTCCCTGTCTGTATCCTATA  1091

seq1  CACAGGCTCAGAGTGCAACTTTCAAACTCATGAAATTCTCCAGAGGTATC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCTCAGAGTGCAACTTTCAAACTCATGAAATTCTCCAGAGGTATC  1141

seq1  TGGTGAAAATTGGATGAATTC  1170
      |||||||||||||||||||||
seq2  TGGTGAAAATTGGATGAATTC  1162

seq1: chrX_132790205_132791360
seq2: B6Ng01-133A23.g_65_1192

seq1  GAATTCACTCAACAAGCATGCTGACTTCAGATGTTATCTGCTAGCATTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCAACAAGCATGCTGACTTCAGATGTTATCTGCTAGCATTCC  50

seq1  CAGGTGTCTTACCTTAAAGGCTTAGTGGAGACTAGATGTCTACTCAGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTCTTACCTTAAAGGCTTAGTGGAGACTAGATGTCTACTCAGCTT  100

seq1  ACTGATAACATTCCAGGAGTTTTACCTAATGGCGGGGAGGATGTTAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATAACATTCCAGGAGTTTTACCTAATGGCGGGGAGGATGTTAAGAC  150

seq1  AGACGTGCAAGCTGAAAAATATATGGCCATTTAAGGGACAAAGATAACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGTGCAAGCTGAAAAATATATGGCCATTTAAGGGACAAAGATAACCA  200

seq1  AGATAATATTGTCCCTTTGACCTACAGCATTCCAGCCCTTCACAATGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATATTGTCCCTTTGACCTACAGCATTCCAGCCCTTCACAATGAGG  250

seq1  GCATTCCTGCATTCCAGTCCTTTGACAAAAACCAGTCAGCGGGACTGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCCTGCATTCCAGTCCTTTGACAAAAACCAGTCAGCGGGACTGTTC  300

seq1  TAGACACAGCACTGTTGGGAAACTTTGCTCTACATTGCTCATCCTAGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACAGCACTGTTGGGAAACTTTGCTCTACATTGCTCATCCTAGGGA  350

seq1  TCCATATCTTCAATAAAATAAAATAAAATAAAATAAAATAAAATAGAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATCTTCAATAAAATAAAATAAAATAAAATAAAATAAAATAGAATA  400

seq1  AGCAGGGAACCAGCATTCTCTGTGAGGAGGTTGGATGCACAAAGGAGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGGAACCAGCATTCTCTGTGAGGAGGTTGGATGCACAAAGGAGTCC  450

seq1  CTACCTTTTGGTTGCACTCACTCAGCATTCAACTTTAGTCAAGGGTCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTTTTGGTTGCACTCACTCAGCATTCAACTTTAGTCAAGGGTCAGC  500

seq1  AGTGCCAGGCTGAGCAATGCTGATATCCTTCCCTTCCCAAGCAGAGAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCAGGCTGAGCAATGCTGATATCCTTCCCTTCCCAAGCAGAGAGTT  550

seq1  CCAGATTTGAGGTTACACTGTGCTTGTTCTCAATTACTTGGCAGAATGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATTTGAGGTTACACTGTGCTTGTTCTCAATTACTTGGCAGAATGCA  600

seq1  GTTTTTGACCCCCAAACTCAGCTAGGAATTTTGGTGGCCTAGATCAACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGACCCCCAAACTCAGCTAGGAATTTTGGTGGCCTAGATCAACTG  650

seq1  CCACATATTTCTCCCCATTTTCTAATTTTTTAAGATTTATTTATTTGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATATTTCTCCCCATTTTCTAATTTTTTAAGATTTATTTATTTGTTA  700

seq1  TATGCAAGTACACTGTAGCTGTCTTCAGACACCCCAGAAGAGGGCACCGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAAGTACACTGTAGCTGTCTTCAGACACCCCAGAAGAGGGCACCGG  750

seq1  ATCTCAAAACATGTGGTTGCTGGAATTTGAACTCAGGACCCTCGGAAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAAAACATGTGGTTGCTGGAATTTGAACTCAGGACCCTCGGAAGAG  800

seq1  CAGTCAGTACTCTTAACCACTGAGCCATCTCTCCAGCCCCCTCTCCCCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGTACTCTTAACCACTGAGCCATCTCTCCAGCCCCCTCTCCCCAT  850

seq1  TTTTCTATAAATTGTGTTGAATACAAGATTTTGGTGTTGTTAGGTTTTTG  900
      |||||||||||||||||||||||| |||||||||||||| ||||||||||
seq2  TTTTCTATAAATTGTGTTGAATAC-AGATTTTGGTGTTG-TAGGTTTTTG  898

seq1  TTTTTATTTTTGTTTTTTTCCAGGACAGGGTTTCTCTGTGTAGCCTTGGC  950
        ||||||||   |||||||||||||| ||||||||||||||||| ||||
seq2  --TTTATTTT--GTTTTTTCCAGGACA-GGTTTCTCTGTGTAGCC-TGGC  942

seq1  TGTCCTGAACTCACTCTGTAAACCAAGCTAGCCTCAAAGTCACAG-AGGT  999
      |||||||||||||||||||||| |||||||||||| ||||||||| ||||
seq2  TGTCCTGAACTCACTCTGTAAA-CAAGCTAGCCTC-AAGTCACAGAAGGT  990

seq1  CCACTTGCCTCTGCCTCTACAGTGCTGGTACTAAAGACATTCACCACCAT  1049
      |||||   ||||| ||||  ||||||||||  || || ||||||||||||
seq2  CCACT--GCTCTG-CTCT--AGTGCTGGTATAAAGGAAATTCACCACCAT  1035

seq1  GCTGAGCAATTATTTATGATATACGTTTTTAATACTATTTAAATAGGGTT  1099
      |||| ||||| || || || ||||  ||||||| | |||||||||||  |
seq2  GCTG-GCAATAATATA-GA-ATACCCTTTTAAT-CAATTTAAATAGG--T  1079

seq1  GAAGTGGTTATGCGCTTTGTTCAATTGTGGAACTTTACTTGTTTTACTGC  1149
      | ||||||||||| |  ||||||    ||| ||  ||||   ||||||||
seq2  GGAGTGGTTATGCCC--TGTTCA----TGGGACCATACT--GTTTACTGC  1121

seq1  AAAGCTC  1156
      || ||||
seq2  AAGGCTC  1128