BAC Information

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BAC

Clone NameB6Ng01-133L12
ChromosomeX (Build37)
Map Location 161,286,016 - 161,405,502
singlet/doubletdoublet
Overlap geneMospd2
Upstream geneAp1s2, Zrsr2, Car5b, Siah1b, Tmem27, Ace2, Bmx, Pir, Figf, Piga, Asb11, Asb9
Downstream geneFancb, LOC627045, Glra2, LOC100040753
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133L12.bB6Ng01-133L12.g
ACCDH934194DH934195
length1,204961
definitionDH934194|Mus musculus domesticus DNA, BAC clone: B6Ng01-133L12, 5' end.DH934195|Mus musculus domesticus DNA, BAC clone: B6Ng01-133L12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(161,286,016 - 161,287,008)(161,404,931 - 161,405,502)
sequence
gaattcatttgtgcagttactctgtagtgtccctaaacccctgatgtctt
ggtcatctgctatttctgactcttatgatcttttctcctatatttccatt
ataccgagtatgatactgatgtcccattcagggctgaatatctcattctt
tgcaccttgaccagttgtgggtctctgtattaattgccatctactgataa
aggctgaaaatgcacagatctatgagtatgccaatcagtcattaggatag
gttatgctttactacaatatcaacttatcagaataatagcagtaggttct
ctattaggtctcatgacttacctcgtctcaagtgaatgatacctggctat
gatgacaatggcaggtttgggtttttgtggagtgggtgttggatcttccc
agaaagtaattgactactcccataacatgccactattgtaccagtggaaa
catcttgccacgctaattgtatagctggcagtatttacaggcaagattaa
tgattacttattattcatatggcagcatgcatgacatcatctaccactat
ggaagctagccaatatagaaaaaacttcagggtcagcacctgcttgattt
cttcattttgtagcataagtatgtgatatcttcagaaataggaccttatc
atcaagttgtggagggtaactaagagcaatggcagtcagctgtaatattt
ggtcgtctaatggattccacttggcaaaaatagctaaccttgtaaggtaa
ccgagatttcaccttttttcctttccttcccagtaatgttattataaaat
ataattccattgactaagaaatccctcgtgtaatgcatattcttacttgt
ataggcatcatcaaaatcagttttagagtctttttcatcacccttaaagg
gaaaccctcactgccattagcagtcactccctatattgtctagctctcag
tcttttataaccattaattcagtaaatgaaatgtaaatgtaatatgtacc
tttgtgactggcttctttcatttatcatctttttaaaactcatggtagca
ttattatttatcaataatactgatttcaaattatatttcgtggaccgaaa
tcttgtaccttgtcgagtattgcaaagttaagattgagtcactggccttt
tatattaagcaacagatggcttttttgcacactgttttgttctcttggat
atat
gaattcttcgatgtagagattctgagcctttactgttttttgggagagat
agcatgcataccagtaactcaaacttgttgagggttgatctgttactatg
tattttagtgttagatactggccctcaaggtctacttaaccccaaggagg
aggagatccgtactacttaacctagctccttattttaaaaccattggtaa
aataaagaagcctacagcctgggcagaagagaggtgggcgaggttttggt
tcctgagcttggagtctaaagcaggaccaggagggagaagatggatagaa
gagaagacaccatggggtaatggatcctgagaactggccatgagggctag
ccagttggacagagtaagagcatcccaggtagaccgtggcaagttatatc
tcagggttattggcaggaagtagacatatagcatagaagttagacatctg
cccaactctagtgctttttcacattatagttttattattattattttatt
tacattctagctgttattcccctctttgtcccccctcctacagtttctca
tcccattcctccttccccttgcctcggaaagggtgctccccccgccagcc
cacttccttccctggggcctttagtctcccaaggattaggtacatcatct
tctccctctgacaccagcccagcccacgtatgctgcctggtaggtggcac
agtctctggtagctccctggggtgtgagttagttaagactgttggtcttc
ctatggggttgccctccccttcagcttcttcagtctctcccttaattcaa
ccatatgggtttctgacctcaatccaatggttgggtgtaaatatctgtgt
ctgtctcagttatctgctggttgggactctcagaggacagccatgccagg
ttcctgtcagtaaacaaatcatagcatcagtaatagtgtcagcccttgat
accttactccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_161286016_161287008
seq2: B6Ng01-133L12.b_281_1252

seq1  AATCAGTCATTAGGATAGGTTATGCTTTACTACAATATCAACTTATCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTCATTAGGATAGGTTATGCTTTACTACAATATCAACTTATCAGA  50

seq1  ATAATAGCAGTAGGTTCTCTATTAGGTCTCATGACTTACCTCGTCTCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAGCAGTAGGTTCTCTATTAGGTCTCATGACTTACCTCGTCTCAAG  100

seq1  TGAATGATACCTGGCTATGATGACAATGGCAGGTTTGGGTTTTTGTGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGATACCTGGCTATGATGACAATGGCAGGTTTGGGTTTTTGTGGAG  150

seq1  TGGGTGTTGGATCTTCCCAGAAAGTAATTGACTACTCCCATAACATGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTTGGATCTTCCCAGAAAGTAATTGACTACTCCCATAACATGCCA  200

seq1  CTATTGTACCAGTGGAAACATCTTGCCACGCTAATTGTATAGCTGGCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGTACCAGTGGAAACATCTTGCCACGCTAATTGTATAGCTGGCAGT  250

seq1  ATTTACAGGCAAGATTAATGATTACTTATTATTCATATGGCAGCATGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACAGGCAAGATTAATGATTACTTATTATTCATATGGCAGCATGCAT  300

seq1  GACATCATCTACCACTATGGAAGCTAGCCAATATAGAAAAAACTTCAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCATCTACCACTATGGAAGCTAGCCAATATAGAAAAAACTTCAGGG  350

seq1  TCAGCACCTGCTTGATTTCTTCATTTTGTAGCATAAGTATGTGATATCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCACCTGCTTGATTTCTTCATTTTGTAGCATAAGTATGTGATATCTT  400

seq1  CAGAAATAGGACCTTATCATCAAGTTGTGGAGGGTAACTAAGAGCAATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATAGGACCTTATCATCAAGTTGTGGAGGGTAACTAAGAGCAATGG  450

seq1  CAGTCAGCTGTAATATTTGGTCGTCTAATGGATTCCACTTGGCAAAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGCTGTAATATTTGGTCGTCTAATGGATTCCACTTGGCAAAAATA  500

seq1  GCTAACCTTGTAAGGTAACCGAGATTTCACCTTTTTTCCTTTCCTTCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACCTTGTAAGGTAACCGAGATTTCACCTTTTTTCCTTTCCTTCCCA  550

seq1  GTAATGTTATTATAAAATATAATTCCATTGACTAAGAAATCCCTCGTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGTTATTATAAAATATAATTCCATTGACTAAGAAATCCCTCGTGTA  600

seq1  ATGCATATTCTTACTTGTATAGGCATCATCAAAATCAGTTTTAGAGTC-T  649
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATGCATATTCTTACTTGTATAGGCATCATCAAAATCAGTTTTAGAGTCTT  650

seq1  TTTCATCACCCTTAAA-GGAAACCCTCACTGCCATTAGCAGTCACTCCCT  698
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTTCATCACCCTTAAAGGGAAACCCTCACTGCCATTAGCAGTCACTCCCT  700

seq1  ATATTGTCTAGCTCTCAGTCTTTTATAACCATTAATTCAGTATAAATGAA  748
      ||||||||||||||||||||||||||||||||||||||||  ||||||||
seq2  ATATTGTCTAGCTCTCAGTCTTTTATAACCATTAATTCAG--TAAATGAA  748

seq1  ATGTAAATGTAATATGTACCTTTGTGACTGGCTTCTTTCATTTATCATCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAATGTAATATGTACCTTTGTGACTGGCTTCTTTCATTTATCATCT  798

seq1  TTTTAAAACTCATGGTAGCATTTATTAGTGTATCAATAATACTGATTTCA  848
      |||||||||||||||||||| |||||| | ||||||||||||||||||| 
seq2  TTTTAAAACTCATGGTAGCA-TTATTA-TTTATCAATAATACTGATTTC-  845

seq1  AAATAATATTTCCTTGTACGGATATTCTGTATCTTGTTCGTATTTTCATA  898
      |||| |||||| | || || || ||  |||| |||| ||| | | |   |
seq2  AAATTATATTT-CGTGGACCGAAATCTTGTACCTTG-TCG-AGTATTGCA  892

seq1  AATTTTAGGTATTTGAGTCACTTGCCCTTTTTATTATTATAACCAACCAT  948
      || || ||    |||||||||| ||| ||| |||     ||| ||||   
seq2  AAGTTAAG---ATTGAGTCACTGGCCTTTTATAT-----TAAGCAAC---  931

seq1  GTATGAGCTTTTTTGCAGACTTGTTTTTGTTTCTCTTGGATATAT  993
        ||| ||||||||||| || ||||||   |||||||||||||||
seq2  AGATG-GCTTTTTTGCACAC-TGTTTT--GTTCTCTTGGATATAT  972

seq1: chrX_161404931_161405502
seq2: B6Ng01-133L12.g_68_639 (reverse)

seq1  GCAAGGGGAAGGAGGAATGGGATGAGAAACTGTAGGAGGGGGGACAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGGGAAGGAGGAATGGGATGAGAAACTGTAGGAGGGGGGACAAAGA  50

seq1  GGGGAATAACAGCTAGAATGTAAATAAAATAATAATAATAAAACTATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAATAACAGCTAGAATGTAAATAAAATAATAATAATAAAACTATAAT  100

seq1  GTGAAAAAGCACTAGAGTTGGGCAGATGTCTAACTTCTATGCTATATGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAAAGCACTAGAGTTGGGCAGATGTCTAACTTCTATGCTATATGTC  150

seq1  TACTTCCTGCCAATAACCCTGAGATATAACTTGCCACGGTCTACCTGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCTGCCAATAACCCTGAGATATAACTTGCCACGGTCTACCTGGGA  200

seq1  TGCTCTTACTCTGTCCAACTGGCTAGCCCTCATGGCCAGTTCTCAGGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTACTCTGTCCAACTGGCTAGCCCTCATGGCCAGTTCTCAGGATC  250

seq1  CATTACCCCATGGTGTCTTCTCTTCTATCCATCTTCTCCCTCCTGGTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACCCCATGGTGTCTTCTCTTCTATCCATCTTCTCCCTCCTGGTCCT  300

seq1  GCTTTAGACTCCAAGCTCAGGAACCAAAACCTCGCCCACCTCTCTTCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAGACTCCAAGCTCAGGAACCAAAACCTCGCCCACCTCTCTTCTGC  350

seq1  CCAGGCTGTAGGCTTCTTTATTTTACCAATGGTTTTAAAATAAGGAGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTGTAGGCTTCTTTATTTTACCAATGGTTTTAAAATAAGGAGCTA  400

seq1  GGTTAAGTAGTACGGATCTCCTCCTCCTTGGGGTTAAGTAGACCTTGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAGTAGTACGGATCTCCTCCTCCTTGGGGTTAAGTAGACCTTGAGG  450

seq1  GCCAGTATCTAACACTAAAATACATAGTAACAGATCAACCCTCAACAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTATCTAACACTAAAATACATAGTAACAGATCAACCCTCAACAAGT  500

seq1  TTGAGTTACTGGTATGCATGCTATCTCTCCCAAAAAACAGTAAAGGCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTACTGGTATGCATGCTATCTCTCCCAAAAAACAGTAAAGGCTCA  550

seq1  GAATCTCTACATCGAAGAATTC  572
      ||||||||||||||||||||||
seq2  GAATCTCTACATCGAAGAATTC  572