MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-135O03
Chromosome	X (Build37)
Map Location	64,472,105 - 64,473,239
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Slitrk2, LOC666824, LOC627734, EG666828
Downstream gene	Gm1140, LOC666842, LOC619873, 4933436I01Rik, LOC100040194
Link	Open Mouse BAC browser

Click to get alignment info.

name	Slitrk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245450 MGI:2679449
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666824 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666824
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC627734 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627734
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins pseudo : _no_value

name	EG666828 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666828 MGI:3643550
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Gm1140 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382217 MGI:2685986
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	LOC666842 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666842
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein pseudo : _no_value

name	LOC619873 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619873
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 Proteins pseudo : _no_value

name	4933436I01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66780 MGI:1914030
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040194 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040194
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Slitrk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110350663 GeneID:245450 MGI:2679449
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SLIT and NTRK-like family, member 2 transcript_id : NM_198863.1

name	Gm1140 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407518 GeneID:382217 MGI:2685986
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : gene model 1140, (NCBI) transcript_id : XM_356330.3

name	4933436I01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385231 GeneID:66780 MGI:1914030
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933436I01 gene transcript_id : NM_025763.1

name	Slitrk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110350664 CCDS:CCDS30169.1 GeneID:245450 MGI:2679449
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007409 - axonogenesis [Evidence IDA] codon_start : 1 exception : mismatches in translation note : slit and trk like gene 2 product : SLIT and NTRK-like family, member 2 protein_id : NP_942563.1

name	Gm1140 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407519 GeneID:382217 MGI:2685986
definition	codon_start : 1 product : hypothetical protein protein_id : XP_356330.3

name	4933436I01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385232 CCDS:CCDS30170.1 GeneID:66780 MGI:1914030
definition	codon_start : 1 product : hypothetical protein LOC66780 protein_id : NP_080039.1

name	LOC666824 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666824
definition	number : 1 pseudo : _no_value

name	EG666828 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666828
definition	number : 2 pseudo : _no_value

name	EG666828 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666828
definition	number : 1 pseudo : _no_value

name	LOC619873 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:619873
definition	number : 4 pseudo : _no_value

name	LOC619873 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:619873
definition	number : 3 pseudo : _no_value

name	LOC619873 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:619873
definition	number : 2 pseudo : _no_value

name	LOC619873 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:619873
definition	number : 1 pseudo : _no_value

name	LOC100040194 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040194
definition	number : 2 pseudo : _no_value

name	LOC100040194 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040194
definition	number : 1 pseudo : _no_value

name	LOC627734 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271665 GeneID:627734
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins product : similar to checkpoint suppressor 1 pseudo : _no_value transcript_id : XR_031567.1

name	LOC666842 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271666 GeneID:666842
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : similar to Ribosomal protein L7a pseudo : _no_value transcript_id : XR_001927.2

clone name	MSMg01-351P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074H24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-444J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216K17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-294B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324N06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-236G11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-479F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537I24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-502B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028M09
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-135O03.b	B6Ng01-135O03.g
ACC	DH935811	DH935812
length	1,116	1,242
definition	DH935811\|Mus musculus domesticus DNA, BAC clone: B6Ng01-135O03, 5' end.	DH935812\|Mus musculus domesticus DNA, BAC clone: B6Ng01-135O03, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctgtcagcagagttttcctacaagctacaaatcataagagatgaa agaatataagcataaaagttcaattggctgaaaattagctacctgagaat aaagcaaataaataaagcttgcacagcaattaaacatgtgataggagaaa gttttttctgaactataaagtttgactttgttgttcaaaatagttcattg tgtttcagctgaacttaatgtaaaaaaaataatatatagatttagcttgg tgatatttttttaattacctggataaagaaaatatctatttatagtgcag tagtaaaaccagacaacttaaaaagaaaggaaaacattgctctatgaaac ttctgttctgcaatactgaattcaggaagaaagtaaaccagtgcctttag aactgtgaagtaaaaaggatgtgaactcagttttctttactaagtcaaga tagtactcattgataagagtcacattgcaccttgcagaaacagtagccct gaacttttttgctatgaatagcagaacaggcaaaaaaatgttaaaaaaaa tattcgaattaatgatctctgtggaatataaacccgaaactactgaggga taataagactaaactagataagaattttgtagagcaaagtatatgtgcag cagagacaaaaggcaagatatttatggaaatagcaataattgtttgtatg cattgaacctcaacaatgaaagctaaaacagatatatggagttcttttaa aatattagataacctgagctaaacaaagacttttaatgatcccatctgta tgtatatgacacataagtgcatttattcttcttatatcactttgtatttt cagaacaaatcaaataaaaatctcatagaaaaagcctttgaaatttatat tttatctgcaaagatatttagtactgatataactggaaaattttgaagaa atctattgaagagatattacttaccagatattaaagcagactataaatat gtgtacatatagatcatagtcatgtaaataaatatgtaaatttgtctgca gatattttttattgtgaaacaactcacatattttatagacatgggaaaat attcttcaacactctg	gaattccctgtgaacatagcagcagatcaggctagggaaacatgcaatgc acaatcacactctctgaaaatctagaaggcaaacagaaacaaaggaagaa aaatccatccaaggaagacacattgataaatcagcacctagaacgatcat catcccaaatccatatgcataagcaccagtgtgaaagcacaatcaataac agcctggacaatatgcattcagtaaagcccacctaccctatgacaatagg ccctgaatattcaaatatagttgaaacaaaagaaaagaccttaagaccag ctataataggaaatgaataaatattgtaaagaaatctagatatgtatgaa taaaccttataaagaactatatcaaactattcaaaaactaaattagatat aaaatcaataaagaaaacacaaactcagagaactcttgaagtaaaaaaat tagaaattctaacaagaactaaagaagcaagtttcacccacagaatacaa aaaatggaagagaaaatctcatgggtttaagatacaacaataaaagtaga tatatcagtcaacaaaatgtttaatctaaaaatctccttgcacaaaatat ccaggaattttaagacagaataaaaagaacaaacctaagaataggtgtag aaaatggagaagaaaaccagctaaaggtcaaacatttgtttcatttgtta aaaaatatttttaacaaaattgtagaagaaaatgttcctaatctaaagga gatgcttataaaggtacaaaaagcatgcaaaacacccaataaattggaat agagaaaaaaatcctctccacgcaataattaagatacataaccaaaatta aatatatagaacaaagaaagaatattaaaatcagcaagataaaaagagca agtaccatataaaggcagaactatcatgattatacttgacatctcaatgg agactccaaagccagaaggaccttgaatatattctgaagaactaagagac cacagataccagttaagactattatatatcctgcaaaatttcatcaccat agatggaagaaagtaagtattccatgataaacagtatctatctaaaaatc agaagtgctagaatagaaaatccaaccttaagaatgttaacttatagcat acaactgctgaattaaataatctcccaccagcaggttcaaagaagggaaa cccaccaccgccacaccaaaacactctcccaccacccgagcg
quality values	Open. Hide. 61 47 24 38 61 61 49 49 61 49 38 61 61 55 61 61 61 61 61 61 61 61 61 61 23 36 15 15 20 26 27 27 35 24 32 59 61 59 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 43 30 55 59 59 59 61 59 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 59 55 55 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 55 55 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 61 61 61 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 61 61 61 59 59 59 59 59 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 57 57 57 57 57 47 57 57 57 52 46 43 57 53 57 57 57 57 57 57 47 53 53 53 57 57 53 57 57 52 47 53 53 47 57 52 47 57 57 57 57 57 52 57 57 57 53 42 53 53 47 57 57 53 57 57 53 57 57 39 52 53 46 47 47 57 57 36 57 57 41 39 53 53 52 53 57 53 57 35 47 53 57 53 57 53 52 50 52 50 53 57 42 57 39 42 57 46 57 52 30 47 30 57 47 47 46 57 57 52 45 53 42 57 37 43 37 57 43 47 50 53 42 36 57 35 38 38 24 53 46 44 37 52 33 52 52 37 52 33 40 42 57 50 50 52 57 47 28 57 38 50 42 37 41 28 38 39 28 37 40 53 52 28 57 40 51 25 40 40 34 24 23 53 45 52 36 38 34 34 40 42 31 35 40 19 39 36 52 28 57 53 30 41 40 36 53 53 45 37 33 37 41 25 36 40 33 41 41 53 47 39 26 40 44 37 57 57 37 33 57 57 53 34 36 32 48 40 25 39 31 35 44 24 36 29 41 38 26 41 37 21 51 31 31 27 46 37 28 34 30 21 51 51 29 27 32 30 38 32 29 30 45 37 16 29 31 28 46 28 27 22 34 28 33 29 29 28 33 33 26 23 30 29 33 26 33 33 32 29 24 27 33 51 48 39 28 28 35 26 22 34 18 31 27 26 18 34 29 29 29 29 51 33 43 28 28 24 51 51 36 34 16 20 33 31 29 24 46 32 29 29 24 43 32 28 29 51 51 51 28 28 31 31 29 22 29 28 31 43 51 51 51 39 27 28 28 27 46 35 28 28 51 26 27 51 30 28 28 28 29 51 51 28 20 20 31 28 24 20 22 51 21 30 27 16 20 28 51 28 29 24 21 25 34 25 33 24 10 16 13 18 12 28 23 21 13 14 51 51 23 21 51 51 27 10 21 30 20 38 44 10 14 27 17 16 20 22 30 25 7 11 29 20 27 16 13 11 25 24 15 19 18 20 7 18 21 19 34 20 18 14 23 7 32 22 20 27 11 8 33 23 25 9 10 17 37 9 24 19 31 33 22 33 14 35 14 30 11 15 7 27 8 35 18 16 29 14 20 29 26 30 23 18 32 11 29 44 24 24 27 34 12 13 13 14 17 13 16 36 11 26 34 14 24 22 29 20 29 22 9 11 31 6 4 6 30 42 42 36 13 7 16 6 7 7 11 31 42 14 14 9 29 11 6 7 16 3 4 9 11 12 33 26 17 6 3 3 2 5 6 4 2 10 7 4 4 21 35 12 5 5 13 6 22 5 7 7 16 3 8 8 17 9 10 5 14	Open. Hide. 61 47 43 47 61 61 61 49 19 43 34 25 49 55 52 41 61 52 55 61 61 61 61 61 61 61 61 61 59 59 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 41 35 52 35 28 36 41 43 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 59 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 42 47 53 61 61 57 57 57 53 57 53 53 53 57 57 57 57 53 47 57 57 57 53 57 53 57 57 57 57 53 53 57 57 57 57 57 57 53 53 57 52 47 57 57 53 47 53 57 45 57 57 53 57 53 53 57 57 57 53 53 57 53 53 53 45 57 53 57 57 52 52 57 57 42 57 57 53 53 52 52 52 47 45 57 47 53 57 53 57 53 45 57 57 57 53 57 53 53 53 53 53 53 57 53 45 53 38 57 57 52 53 53 52 46 43 50 53 57 57 30 35 57 57 43 50 53 53 57 37 47 38 57 33 38 52 57 57 57 57 50 57 53 52 42 53 53 37 46 53 50 57 37 52 47 36 52 34 46 33 53 40 53 39 53 57 57 47 36 57 46 46 34 53 57 23 53 57 57 33 37 53 29 52 47 48 23 57 33 53 53 21 41 33 53 39 37 28 41 57 57 52 32 41 57 37 33 42 57 53 53 33 52 30 57 57 57 57 36 35 33 26 57 57 57 44 30 46 40 30 53 57 37 28 57 41 24 44 36 47 53 27 48 57 57 40 33 40 25 53 34 53 33 29 47 36 37 37 37 46 39 30 39 36 24 28 22 32 32 30 45 30 34 48 51 30 26 44 18 35 40 18 46 46 51 37 32 30 30 30 47 24 36 46 46 31 30 30 32 39 30 29 43 33 33 51 37 32 39 36 29 29 30 29 29 29 36 29 46 46 51 51 51 51 29 29 21 43 39 33 39 34 43 13 29 25 29 28 27 29 22 22 23 39 21 30 16 29 21 21 29 17 43 29 29 30 34 25 41 46 29 35 39 28 51 27 38 23 29 24 36 27 29 29 36 32 24 39 19 25 28 51 32 26 24 28 27 22 23 46 29 51 51 28 28 28 20 24 22 21 18 29 27 13 34 51 51 51 35 34 41 27 21 17 24 28 24 18 32 29 15 41 26 30 22 38 16 29 29 12 23 22 19 39 16 24 22 35 26 23 25 29 29 28 29 23 29 20 33 23 20 19 25 20 10 29 27 30 28 23 16 19 38 34 28 12 11 9 17 19 14 32 44 26 19 21 23 7 8 8 15 6 10 20 16 17 14 12 13 25 18 10 5 15 19 29 24 22 22 34 30 34 12 10 25 13 22 23 29 8 32 12 34 22 22 13 15 8 23 23 14 9 20 23 18 27 18 20 30 34 13 34 19 34 25 13 27 17 14 5 6 9 13 14 17 11 30 18 22 39 44 10 17 44 25 14 27 6 12 7 11 21 9 9 11 6 4 4 21 7 6 8 7 18 37 23 15 22 20 4 4 5 11 15 19 7 20 16 23 19 19 6 9 22 15 8 5 24 12 9 7 7 7 10 29 20 10 23 42 36 27 10 23 7 6 9 24 14 4 4 17 9 9 11 9 11 9 4 5 6 13 30 36 20 6 11 15 14 11 13 24 9 9 26 15 9 6 11 5 17 15 24 10 11 16 7 11 8 12 6 9 12 5 11 6 11 7 12 14 7 7 7 8 8 3 5 5 12 10 18 9 9 5 17 5 5 6 8 6 7 3 3 12 6 6 3 4 1 6 16 7 6 12 9 4 6 8 8 3 24 4 3 8 5 4 7 4 7 6 5 4 6 11 5 8 18 7 6 5 5 7 11 17 27 16 4 6 7 14 6 4 3 7 14 3 9 5 3 6 10 8 4 6 7 6 6

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_64472105_64473239
seq2: B6Ng01-135O03.b_45_1160 (reverse)

seq1  CAGAGTGTTTGAAGGAATATTTTTCCCATTGGTCTGATTAAAATATGTTG  50
      ||||||| ||||| ||||| |||||||||  ||||   ||||||||| ||
seq2  CAGAGTG-TTGAA-GAATA-TTTTCCCAT--GTCT--ATAAAATATG-TG  42

seq1  AGTTTGTTTTCACAAT-AAAAATATCTGCAGACAAATTTACATATTTATT  99
      ||||   ||||||||| ||||||||||||||||||||||||||||||| |
seq2  AGTT--GTTTCACAATAAAAAATATCTGCAGACAAATTTACATATTTA-T  89

seq1  TTACATGACTATTGATTCTTATATTGTTACACATATTTATAGTCTGCTTT  149
      ||||||||||| ||||   |||||   |||||||||||||||||||||||
seq2  TTACATGACTA-TGAT--CTATAT--GTACACATATTTATAGTCTGCTTT  134

seq1  AATATCTGGTTAAGTTAATATCTCTTCAATAGATTTTCTTCAAAATTTTC  199
      ||||||||| |||| |||||||||||||||||| ||||||||||||||||
seq2  AATATCTGG-TAAG-TAATATCTCTTCAATAGA-TTTCTTCAAAATTTTC  181

seq1  CAGTTATTATCAGTACTAAATATCTTTGCAGATAAAATATAAATTTCAAA  249
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTA-TATCAGTACTAAATATCTTTGCAGATAAAATATAAATTTCAAA  230

seq1  GGCTTTTTCTATGAGATTTTTATTTGATTTGTTCTGAAAATACAAAGTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTTCTATGAGATTTTTATTTGATTTGTTCTGAAAATACAAAGTGA  280

seq1  TATAAGAAGAATAAATGCACTTATGTGTCATATACATACAGATGGGATCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGAAGAATAAATGCACTTATGTGTCATATACATACAGATGGGATCA  330

seq1  TTAAAAGTCTTTGTTTAGCTCAGGTTATCTAATATTTTAAAAGAACTCCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGTCTTTGTTTAGCTCAGGTTATCTAATATTTTAAAAGAACTCCA  380

seq1  TATATCTGTTTTAGCTTTCATTGTTGAGGTTCAATGCATACAAACAATTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTGTTTTAGCTTTCATTGTTGAGGTTCAATGCATACAAACAATTA  430

seq1  TTGCTATTTCCATAAATATCTTGCCTTTTGTCTCTGCTGCACATATACTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATTTCCATAAATATCTTGCCTTTTGTCTCTGCTGCACATATACTT  480

seq1  TGCTCTACAAAATTCTTATCTAGTTTAGTCTTATTATCCCTCAGTAGTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTACAAAATTCTTATCTAGTTTAGTCTTATTATCCCTCAGTAGTTT  530

seq1  CGGGTTTATATTCCACAGAGATCATTAATTCGAATATTTTTTTTAACATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTTTATATTCCACAGAGATCATTAATTCGAATATTTTTTTTAACATT  580

seq1  TTTTTGCCTGTTCTGCTATTCATAGCAAAAAAGTTCAGGGCTACTGTTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGCCTGTTCTGCTATTCATAGCAAAAAAGTTCAGGGCTACTGTTTC  630

seq1  TGCAAGGTGCAATGTGACTCTTATCAATGAGTACTATCTTGACTTAGTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGGTGCAATGTGACTCTTATCAATGAGTACTATCTTGACTTAGTAA  680

seq1  AGAAAACTGAGTTCACATCCTTTTTACTTCACAGTTCTAAAGGCACTGGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACTGAGTTCACATCCTTTTTACTTCACAGTTCTAAAGGCACTGGT  730

seq1  TTACTTTCTTCCTGAATTCAGTATTGCAGAACAGAAGTTTCATAGAGCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTCTTCCTGAATTCAGTATTGCAGAACAGAAGTTTCATAGAGCAA  780

seq1  TGTTTTCCTTTCTTTTTAAGTTGTCTGGTTTTACTACTGCACTATAAATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCCTTTCTTTTTAAGTTGTCTGGTTTTACTACTGCACTATAAATA  830

seq1  GATATTTTCTTTATCCAGGTAATTAAAAAAATATCACCAAGCTAAATCTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTTCTTTATCCAGGTAATTAAAAAAATATCACCAAGCTAAATCTA  880

seq1  TATATTATTTTTTTTACATTAAGTTCAGCTGAAACACAATGAACTATTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTATTTTTTTTACATTAAGTTCAGCTGAAACACAATGAACTATTTT  930

seq1  GAACAACAAAGTCAAACTTTATAGTTCAGAAAAAACTTTCTCCTATCACA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAACAAAGTCAAACTTTATAGTTCAGAAAAAACTTTCTCCTATCACA  980

seq1  TGTTTAATTGCTGTGCAAGCTTTATTTATTTGCTTTATTCTCAGGTAGCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAATTGCTGTGCAAGCTTTATTTATTTGCTTTATTCTCAGGTAGCT  1030

seq1  AATTTTCAGCCAATTGAACTTTTATGCTTATATTCTTTCATCTCTTATGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCAGCCAATTGAACTTTTATGCTTATATTCTTTCATCTCTTATGA  1080

seq1  TTTGTAGCTTGTAGGAAAACTCTGCTGACAGAATTC  1135
      ||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGCTTGTAGGAAAACTCTGCTGACAGAATTC  1116

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information