BAC Information

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BAC

Clone NameB6Ng01-136H17
ChromosomeX (Build37)
Map Location 41,702,372 - 41,703,503
singlet/doubletsinglet
Overlap genenone
Upstream geneGm362, LOC100039977, LOC100039987, LOC637141
Downstream geneWdr40c, Wdr40b, LOC665585, 1110059M19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136H17.bB6Ng01-136H17.g
ACCDH936244DH936245
length1,2211,124
definitionDH936244|Mus musculus domesticus DNA, BAC clone: B6Ng01-136H17, 5' end.DH936245|Mus musculus domesticus DNA, BAC clone: B6Ng01-136H17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacagtgtcttttgccttgcagaaacattggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttatcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatttt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccaacatattttatattat
ttgtgacttattgagaaggtgtgtttccctaatttctttctcagcctgtt
tatctttgtatagagaaaggccattgacttgcttgagttattttatatca
gctactcatcgagctggtttatcagtagagttcttctggtggattttagg
gtcacttatttactatcatcactgcgaagtgaattggactcctctttcaa
attggatgcctgattccattgagtgcaatggctggctataactcagacac
taggtggaacgtagtacgcag
gaattctcatccaaggaatacggaagggctgagaagcacttgaaaaaatg
ttcaacatagaaagttatttttttttatagtgtgttacccttagaactta
ccactatccctgctagtaaaatccaaatgaggagaatgcatcttagatct
ttctacgttataatgagccttcttattaggttgaattatagaaagtcaag
tctatttttattccagtaaaatgttagaatactaaccaactctagtgttg
aatttcttgaattttactcctatataaggcaaatgagttctccctgcacc
ccctcttgtttttatatcagtagccatcttttcaaaatatcaaaagatat
cagtcattcaaagagtaaatgagtaaaagtggtcactttcaggcaataaa
aagagatctgtactctaaagccaacagaggccaagaaaggatgtctaccc
ctctgtcagtaacaccattttgagtggtgaaactgggatttaagaagagg
agggcatgcatttaggaattgggtatggggcatagaagggctaggagaaa
ggaaagggatgcaaggaattatgtaattatattttcgttaaataaaaata
aaatttgaaagctctaaaactcacatcaaattattaaactttcaaaatat
aaatcaggtatagtgacacacacctttagccctaacatttgaaaggagga
agcaggtcgatctctgtgaaggaaggccagcctgatctattataaggagt
tctatctagtctgatcaggattgtgtagtaagatcttctctcaccaagaa
taataaccaaaagttactcaaaattaatcacaagtccacatgctatgcca
taccagagagagtaattcactacagtatttccattttccatctaggacat
tcttgccagtactgtggctactattttacatgaattaaaacagtcagtag
tatatatagaactaaacaagtttaagaaattaatttccatatggagagag
gaagtgcttcacatgttagccttatcctaggagctattagcacttgatgc
tgctggggcaatggggtcaatctcttcagagtgtgccatttgtggtttcc
cttaatttctaatgatgacctgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_41702372_41703503
seq2: B6Ng01-136H17.g_70_1193 (reverse)

seq1  TTCAGGGTCATTCATTAG-AATATAGGGAAACTACCAATGGCCACACTCC  49
      |||| ||||| ||||||| |||  |||||||| || ||||| |||||| |
seq2  TTCA-GGTCA-TCATTAGAAATTAAGGGAAACCACAAATGG-CACACT-C  46

seq1  TGTAGAGATGTGACACCCATTGCCCCAGCAGCAATCAAGTGCTAATAGCT  99
      || |||||| |||| ||||||||||||||||| |||||||||||||||||
seq2  TGAAGAGAT-TGAC-CCCATTGCCCCAGCAGC-ATCAAGTGCTAATAGCT  93

seq1  CCTAGGATAAGGCTAACATGTG-AGCACTTCCTCTCTCCATATTGGAAAT  148
      |||||||||||||||||||||| ||||||||||||||||||| |||||||
seq2  CCTAGGATAAGGCTAACATGTGAAGCACTTCCTCTCTCCATA-TGGAAAT  142

seq1  TTAATTTTCTTAAACTTGTTTAGTTCTATATATACCTACTGACTGTTTTA  198
      |  | ||||||||||||||||||||||||||||| |||||||||||||||
seq2  T--AATTTCTTAAACTTGTTTAGTTCTATATATA-CTACTGACTGTTTTA  189

seq1  ATTCATGT-AAATAGTAGCCACAGTACTGGCAAGAATGTCCTAGATGGAA  247
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGTAAAATAGTAGCCACAGTACTGGCAAGAATGTCCTAGATGGAA  239

seq1  AATGGAAATACTGTAGTGAATTACTCTCTCTGGTATGGCATAGCATGTGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAATACTGTAGTGAATTACTCTCTCTGGTATGGCATAGCATGTGG  289

seq1  ACTTGTGATTAATTTTGAGTAACTTTTGGTTATTATTCTTGGTGAGAGAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTGATTAATTTTGAGTAACTTTTGGTTATTATTCTTGGTGAGAGAA  339

seq1  GATCTTACTACACAATCCTGATCAGACTAGATAGAACTCCTTATAATAGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTACTACACAATCCTGATCAGACTAGATAGAACTCCTTATAATAGA  389

seq1  TCAGGCTGGCCTTCCTTCACAGAGATCGACCTGCTTCCTCCTTTCAAATG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTGGCCTTCCTTCACAGAGATCGACCTGCTTCCTCCTTTCAAATG  439

seq1  TTAGGGCTAAAGGTGTGTGTCACTATACCTGATTTATATTTTGAAAGTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGCTAAAGGTGTGTGTCACTATACCTGATTTATATTTTGAAAGTTT  489

seq1  AATAATTTGATGTGAGTTTTAGAGCTTTCAAATTTTATTTTTATTTAACG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTTGATGTGAGTTTTAGAGCTTTCAAATTTTATTTTTATTTAACG  539

seq1  AAAATATAATTACATAATTCCTTGCATCCCTTTCCTTTCTCCTAGCCCTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATAATTACATAATTCCTTGCATCCCTTTCCTTTCTCCTAGCCCTT  589

seq1  CTATGCCCCATACCCAATTCCTAAATGCATGCCCTCCTCTTCTTAAATCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCCCCATACCCAATTCCTAAATGCATGCCCTCCTCTTCTTAAATCC  639

seq1  CAGTTTCACCACTCAAAATGGTGTTACTGACAGAGGGGTAGACATCCTTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCACCACTCAAAATGGTGTTACTGACAGAGGGGTAGACATCCTTT  689

seq1  CTTGGCCTCTGTTGGCTTTAGAGTACAGATCTCTTTTTATTGCCTGAAAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCCTCTGTTGGCTTTAGAGTACAGATCTCTTTTTATTGCCTGAAAG  739

seq1  TGACCACTTTTACTCATTTACTCTTTGAATGACTGATATCTTTTGATATT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCACTTTTACTCATTTACTCTTTGAATGACTGATATCTTTTGATATT  789

seq1  TTGAAAAGATGGCTACTGATATAAAAACAAGAGGGGGTGCAGGGAGAACT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAGATGGCTACTGATATAAAAACAAGAGGGGGTGCAGGGAGAACT  839

seq1  CATTTGCCTTATATAGGAGTAAAATTCAAGAAATTCAACACTAGAGTTGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCCTTATATAGGAGTAAAATTCAAGAAATTCAACACTAGAGTTGG  889

seq1  TTAGTATTCTAACATTTTACTGGAATAAAAATAGACTTGACTTTCTATAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTATTCTAACATTTTACTGGAATAAAAATAGACTTGACTTTCTATAA  939

seq1  TTCAACCTAATAAGAAGGCTCATTATAACGTAGAAAGATCTAAGATGCAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACCTAATAAGAAGGCTCATTATAACGTAGAAAGATCTAAGATGCAT  989

seq1  TCTCCTCATTTGGATTTTACTAGCAGGGATAGTGGTAAGTTCTAAGGGTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCATTTGGATTTTACTAGCAGGGATAGTGGTAAGTTCTAAGGGTA  1039

seq1  ACACACTATAAAAAAAAATAACTTTCTATGTTGAACATTTTTTCAAGTGC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTATAAAAAAAAATAACTTTCTATGTTGAACATTTTTTCAAGTGC  1089

seq1  TTCTCAGCCCTTCCGTATTCCTTGGATGAGAATTC  1132
      |||||||||||||||||||||||||||||||||||
seq2  TTCTCAGCCCTTCCGTATTCCTTGGATGAGAATTC  1124