BAC Information

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BAC

Clone NameB6Ng01-137H08
ChromosomeX (Build37)
Map Location 127,666,300 - 127,789,920
singlet/doubletdoublet
Overlap geneLOC665799
Upstream geneDiap2, LOC100040092, LOC665773
Downstream geneLOC670449, LOC245600, EG631264
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137H08.bB6Ng01-137H08.g
ACCDH936971DH936972
length1,103699
definitionDH936971|Mus musculus domesticus DNA, BAC clone: B6Ng01-137H08, 5' end.DH936972|Mus musculus domesticus DNA, BAC clone: B6Ng01-137H08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,666,300 - 127,667,425)(127,789,223 - 127,789,920)
sequence
gaattctctttattcttctttgaatgcaactttcatagttaagacaatta
ctgtactcttctcatggaaaaatatttttaacaatactaattaaatgtct
tttatttctcagagctttattcagattatctatgcactgtcaagctgatt
ttggtagattggtagtttttctgagtatttttacttcatctgtatttatg
ttcttggatttcctaggagaagagttatgcacattgtaagctgcaatatg
ggtgctgagaattgaattcaagtcttcttaatgaatacccagtaccacct
ttccagatcattatttctaattttttataatcatttctaatttttaatat
ttactgctctcctggttgtttgttgcttttttttttttcatcacctaaaa
caagctagagttatctggatagaggaaagccaattgagaatatacctcta
tcagatgccaaatcagtagggcattttcttgactaatgtgggagaactca
gcctactgtgggtggtgccacatgaaggcaggtggtcgtgggttgtataa
gcaagcagcctactcaagcgatggggaacaacccagtaagcagcactctt
atgtgtcctgggttccagtttcttccttcggctctccttctgacttcctt
tgcagaaagactgtaaactgcatggagaaataaccccttccttacacaag
tcactttttgccatggtccttatcactgcaacagaaaccaagctaagaca
gctaccaaataataagttccaagagggaaagaaaaaataattcctattat
tttatgacctagttgcctttgtttcaaagagtgatatagcacatatttct
cattattttcatgtgaatcaaattattgtattcccagtatataaaggata
gcatattcaattattttgcaatgctttgaaagtataacaacgtaaaaaca
gattctaggtctttagcccagctcggatgtgcctttgtaaagtagctaat
cataaacaatagcgacattctcatcaccgcttcctgggttcaagagtgct
cattcaagaagtcaccagaacctgcatgcaatgtgctattgtaggctctt
aga
gaattccacaggtttcaagagtcatacaaaatacatttgctgttttaaag
ggtgtgcaagttcagtctaggagttcattattcaagaatgtgaaaaatcc
tcccaaatcaatgtaagagaagacagagcatacaatgattgtcaaataac
aatggaagagcaaggaaaaaaatgggcagtccattaacctctttgtctta
tttcaaagccaaatcagaagtgaaaggaaaaggtaacattgaaaaaggaa
tagaaaaggtctgactcaacaaacaaggaaggcaactagtagaactgtta
aaaacattaaaaaaaaaatcatttcttttccctaggagtctaggtctgga
gagccaagaaatatataacccttgttttctagaattgttatagtacaact
tgcacacatgcacacatacacacacacatacacacacacaaagagagggg
ggagagagggagagggagagagggagagagacagagaagactgagacaga
gaagacagggacagaaacaaagtgtcaccatctccatttctctcatcata
tcaacaaggttcagtaactacatttagatttttggtatctataacatatc
agttcttcagagtttaaaaatatggtcttttaatcagaaagaatgttaga
attaaaataacacagaatttggcctgttgcatacacattaaaattgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_127666300_127667425
seq2: B6Ng01-137H08.b_45_1147

seq1  GAATTCTCTTTATTCTTCTTTGAATGCAACTTTCATAGTTAAGACAATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTATTCTTCTTTGAATGCAACTTTCATAGTTAAGACAATTA  50

seq1  CTGTACTCTTCTCATGGAAAAATATTTTTAACAATACTAATTAAATGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTCTTCTCATGGAAAAATATTTTTAACAATACTAATTAAATGTCT  100

seq1  TTTATTTCTCAGAGCTTTATTCAGATTATCTATGCACTGTCAAGCTGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCTCAGAGCTTTATTCAGATTATCTATGCACTGTCAAGCTGATT  150

seq1  TTGGTAGATTGGTAGTTTTTCTGAGTATTTTTACTTCATCTGTATTTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAGATTGGTAGTTTTTCTGAGTATTTTTACTTCATCTGTATTTATG  200

seq1  TTCTTGGATTTCCTAGGAGAAGAGTTATGCACATTGTAAGCTGCAATATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGATTTCCTAGGAGAAGAGTTATGCACATTGTAAGCTGCAATATG  250

seq1  GGTGCTGAGAATTGAATTCAAGTCTTCTTAATGAATACCCAGTACCACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGAGAATTGAATTCAAGTCTTCTTAATGAATACCCAGTACCACCT  300

seq1  TTCCAGATCATTATTTCTAATTTTTTATAATCATTTCTAATTTTTAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGATCATTATTTCTAATTTTTTATAATCATTTCTAATTTTTAATAT  350

seq1  TTACTGCTCTCCTGGTTGTTTGTTGCTTTTTTTTTTTTCATCACCTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGCTCTCCTGGTTGTTTGTTGCTTTTTTTTTTTTCATCACCTAAAA  400

seq1  CAAGCTAGAGTTATCTGGATAGAGGAAAGCCAATTGAGAATATACCTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTAGAGTTATCTGGATAGAGGAAAGCCAATTGAGAATATACCTCTA  450

seq1  TCAGATGCCAAATCAGTAGGGCATTTTCTTGACTAATGTGGGAGAACTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGCCAAATCAGTAGGGCATTTTCTTGACTAATGTGGGAGAACTCA  500

seq1  GCCTACTGTGGGTGGTGCCACATGAAGGCAGGTGGTCGTGGGTTGTATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACTGTGGGTGGTGCCACATGAAGGCAGGTGGTCGTGGGTTGTATAA  550

seq1  GCAAGCAGCCTACTCAAGCGATGGGGAACAACCCAGTAAGCAGCACTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCAGCCTACTCAAGCGATGGGGAACAACCCAGTAAGCAGCACTCTT  600

seq1  ATGTGTCCTGGGTTCCAGTTTCTTCCTTCGGCTCTCCTTCTGACTTCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCCTGGGTTCCAGTTTCTTCCTTCGGCTCTCCTTCTGACTTCCTT  650

seq1  TGCAGAAAGACTGTAAACTGCATGGAGAAATAACCCCTTCCTTACACAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAAGACTGTAAACTGCATGGAGAAATAACCCCTTCCTTACACAAG  700

seq1  TCACTTTTTGCCATGGTCCTTATCACTGCAACAGAAACCAAGCTAAGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTTTGCCATGGTCCTTATCACTGCAACAGAAACCAAGCTAAGACA  750

seq1  GCTACCAAATAATAAGTTCCAAGAGGGAAAGAAAAAATAATTCCTATTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCAAATAATAAGTTCCAAGAGGGAAAGAAAAAATAATTCCTATTAT  800

seq1  TTTATGACCTAGTTGCCATTGTTTCAAAGAGTGATATAGCACATATTTCT  850
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTTATGACCTAGTTGCCTTTGTTTCAAAGAGTGATATAGCACATATTTCT  850

seq1  CATTATTTTCATGTGAATCAAATTATTGTATTCCCAGTCATATAAAGGAT  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CATTATTTTCATGTGAATCAAATTATTGTATTCCCAGT-ATATAAAGGAT  899

seq1  AGCATATTCAATTA-TTTGCAATGCTTTGAAAGTATAACAACGTAAAAAC  949
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGCATATTCAATTATTTTGCAATGCTTTGAAAGTATAACAACGTAAAAAC  949

seq1  AGAATTCTAGGCCTTTAGGCCCAGGCTCGGGAATGTGGCCTTTGTAAAGG  999
      || |||||||| ||||| ||||| ||||||  |||| ||||||||||| |
seq2  AG-ATTCTAGGTCTTTA-GCCCA-GCTCGG--ATGT-GCCTTTGTAAA-G  992

seq1  TATGCTAATCATAAAACAAATAGCGACATTCCTCCATCCACCCGCTTCCT  1049
      || ||||||||||||   |||||||||||||   ||||   |||||||||
seq2  TA-GCTAATCATAAA--CAATAGCGACATTC--TCATC--ACCGCTTCCT  1035

seq1  GGGTTCAAAGAGTGCTCATTCAAAGAAAGTCACCCAGAACCTGCAATGCA  1099
      |||||| ||||||||||||||||   |||||| ||||||||||| |||| 
seq2  GGGTTC-AAGAGTGCTCATTCAA--GAAGTCA-CCAGAACCTGC-ATGC-  1079

seq1  AATGTGCTATTGTTAGGGGCTCTTAGA  1126
      |||||||||||||    ||||||||||
seq2  AATGTGCTATTGT---AGGCTCTTAGA  1103

seq1: chrX_127789223_127789920
seq2: B6Ng01-137H08.g_70_768 (reverse)

seq1  CTACAATTAT-ATGTGTATGCAACAGGCCAAA-TCTGTGTTATTTTAAAT  48
      | |||||| | ||||||||||||||||||||| ||||||||||||| |||
seq2  CAACAATTTTAATGTGTATGCAACAGGCCAAATTCTGTGTTATTTT-AAT  49

seq1  TCTAACATTCTTTCTGATTAAATGACCATAATTTTTAAACTCTGAAGAAC  98
      |||||||||||||||||||||| |||||| ||||||||||||||||||||
seq2  TCTAACATTCTTTCTGATTAAAAGACCAT-ATTTTTAAACTCTGAAGAAC  98

seq1  TGATATGTTATAGATACC-AAAATCTATATGTAGTTACTGAACCTTGTTG  147
      |||||||||||||||||| |||||||| ||||||||||||||||||||||
seq2  TGATATGTTATAGATACCAAAAATCTAAATGTAGTTACTGAACCTTGTTG  148

seq1  ATATGATGAGAGAAATGGAGATGGTGACACTTTGTTTCTGTCCCTGTCTT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATGAGAGAAATGGAGATGGTGACACTTTGTTTCTGTCCCTGTCTT  198

seq1  CTCTGTCTCTGTCTTCTCTGTCTCTCTCCCTCTCTCCCTCTCCCTCTCTC  247
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTCAGTCTTCTCTGTCTCTCTCCCTCTCTCCCTCTCCCTCTCTC  248

seq1  CCCCCTCTCTTTGTGTGTGTGTATGTGTGTGTGTATGTGTGCATGTGTGC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCTCTTTGTGTGTGTGTATGTGTGTGTGTATGTGTGCATGTGTGC  298

seq1  AAGTTGTACTATAACAATTCTAGAAAACAAGGGTTATATATTTCTTGGCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTACTATAACAATTCTAGAAAACAAGGGTTATATATTTCTTGGCT  348

seq1  CTCCAGACCTAGACTCCTAGGGAAAAGAAATGATTTTTTTTTTAATGTTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGACCTAGACTCCTAGGGAAAAGAAATGATTTTTTTTTTAATGTTT  398

seq1  TTAACAGTTCTACTAGTTGCCTTCCTTGTTTGTTGAGTCAGACCTTTTCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGTTCTACTAGTTGCCTTCCTTGTTTGTTGAGTCAGACCTTTTCT  448

seq1  ATTCCTTTTTCAATGTTACCTTTTCCTTTCACTTCTGATTTGGCTTTGAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTTTCAATGTTACCTTTTCCTTTCACTTCTGATTTGGCTTTGAA  498

seq1  ATAAGACAAAGAGGTTAATGGACTGCCCATTTTTTTCCTTGCTCTTCCAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGACAAAGAGGTTAATGGACTGCCCATTTTTTTCCTTGCTCTTCCAT  548

seq1  TGTTATTTGACAATCATTGTATGCTCTGTCTTCTCTTACATTGATTTGGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTTGACAATCATTGTATGCTCTGTCTTCTCTTACATTGATTTGGG  598

seq1  AGGATTTTTCACATTCTTGAATAATGAACTCCTAGACTGAACTTGCACAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTTTCACATTCTTGAATAATGAACTCCTAGACTGAACTTGCACAC  648

seq1  CCTTTAAAACAGCAAATGTATTTTGTATGACTCTTGAAACCTGTGGAATT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAAACAGCAAATGTATTTTGTATGACTCTTGAAACCTGTGGAATT  698

seq1  C  698
      |
seq2  C  699