MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-138A20
Chromosome	X (Build37)
Map Location	44,019,728 - 44,020,966
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100040075, Actrt1, EG245405, LOC665632
Downstream gene	EG434775, LOC236775, LOC100040133, LOC100040145
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040075 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040075
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Actrt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73360 MGI:1920610
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG245405 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245405 MGI:3647751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 130 ESTs, 8 Proteins

name	LOC665632 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665632
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 13 Proteins pseudo : _no_value

name	EG434775 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434775 MGI:3645717
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC236775 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:236775
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 Proteins pseudo : _no_value

name	LOC100040133 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040133
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100040145 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040145
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Actrt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370294 GeneID:73360 MGI:1920610
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : actin-related protein T1 transcript_id : NM_028514.2

name	EG245405 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271556 GeneID:245405 MGI:3647751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 130 ESTs, 7 Proteins product : predicted gene, EG245405 transcript_id : XM_141727.9

name	Actrt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386318 CCDS:CCDS30102.1 GeneID:73360 MGI:1920610
definition	GO_component : GO:0005856 - cytoskeleton [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : actin-related protein T1 protein_id : NP_082790.1

name	EG245405 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63744454 GeneID:245405 MGI:3647751
definition	codon_start : 1 product : hypothetical protein protein_id : XP_141727.3

name	LOC100040075 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040075
definition	number : 1 pseudo : _no_value

name	LOC236775 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:236775
definition	number : 1 pseudo : _no_value

name	LOC100040133 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040133
definition	number : 1 pseudo : _no_value

name	LOC100040145 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040145
definition	number : 1 pseudo : _no_value

name	LOC100040145 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040145
definition	number : 2 pseudo : _no_value

name	LOC665632 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271529 GeneID:665632
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 13 Proteins product : similar to laminin receptor pseudo : _no_value transcript_id : XR_031534.1

name	EG434775 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94407352 GeneID:434775 MGI:3645717
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, EG434775 transcript_id : XR_001556.1

clone name	MSMg01-366B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296C07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-163L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291N06
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-138A20.b	B6Ng01-138A20.g
ACC	DH937412	DH937413
length	1,215	1,173
definition	DH937412\|Mus musculus domesticus DNA, BAC clone: B6Ng01-138A20, 5' end.	DH937413\|Mus musculus domesticus DNA, BAC clone: B6Ng01-138A20, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcatttataagccaggtcatttccatccatattagttacttcctca cttctgtgacaacaagtacacagaaagaggcaactgattggagaaaaggt tttgatcagtgagtttgaggagaggggattttctttttcttttttttttt ttaaatcctagtttggaaggtaggggatcaaaagtgggaggctgacagct tacattacatttttagtcagcaaagggaactgtaaatggggctagattat aaaacttcaacatgcatggccagtattcacttctcacagcatgtctccac ctcctaaaggttctagaatcttcccaaagagtataaacatctagaaacta agtattaagcacaaaaatgtaggggaaatattttcctttccaagcacgat caggatttcctctgataactcatgaagttagtaatttcttcatatgcatc tccttcatatatatcaataggccagtgttatgaatctcctattacttatt ttacagatgaaatctagaagaggaacctgtttatgcttgatgtcattgtt ttattccttgaagtgcaatttcaggaattactaatctaccttcataaata actgcttacatgaatccagcgagaatattgccattttcccatctctcttt caaagctacatcaacattaagtagaaaatctagcaaagcttctggctaag taacactataaagaaaaaaaaaaacaagaaatgaatatgaagttttggtg aacccatattggcttctttcataaatgcctaaattccatctgcctaataa cagttttgctagaaatcaacatttatcttccaatttttatctcagaatag aacacatttttatgggttttgaaaatgcagctatttatatatctcaaatc tttaattacttcttttagttttagtaatttctttaaaaaattaaatagtt tagaaattgtaaatactaaatttccttctcaaatattgagttcattatag tcttatctatggcaaactgtactactgcatagattctaacacataatatt cagagttatatttatttattatgtatgtgctggctcacattcataggtgt gtacagtcagaaagacatttgtaagtagattctgtctttcaacatcagag tttccaggaatggacccacatcgacgctgtgaacgtctttaccatggcac ctcatcagccttagc	gaattccaggacacaatgaaaagacaaaacctaagagtaaggaatagaag tgagcaaagatttctagctcaaaggagcaagaaaaaatatcttcaacaaa atcagagaaaaaaaaaactccactaacctaaagaaagagatgcctattaa catacaaaaagcatatagaacatcaaatagataggaccagaaacgaaaat tctcttgtcccataacaatcaaaatagaaaatgcacagaacaaagaaaga atattaaaggaaaaaggccaaattatatataaagtcagacctatcagaat ttcaccagattttataacagagaccctaaaagccagaagagcctgaactg atgtcatgcagaacctaagagaacacaaatgctagcccaggcttctatac tctgcaaaaatctcaatcatcatatatgcagaaaccaaaatatgccatga taaaaccaaatttaaacaatatctaccaatccatccctacaaaggattct agaatgtcaactccaatacaaggagggtacctacaccaaaaaaaatagaa attaatcatttcacaacaaaaccaaaggagagaatcacatacacataatg ctgcctacaataacaagcatgacaggaactaccaatcatccatatttaat atcactaatatcaaaggactcaactccctcaaccccccaaaaagacataa gctaacaaactggatacacaagcaggatgccgcattttgcttcatacaag gaacacacctcaatgacaaagacaaacaatgcctcagagtgaaagactgg aagtcttaaatagtcccaagaaatgggcaggagttgccattatgatatcc aataaaatagactttaaccaaaagttgtcaagtgagatagggaagggcac ttcatatgcatcaaacaaaattcaccaagagaaagtctcaattgtgacat ctatgccccaaatgcaagcaccacccacattcataaataactttactaaa gctcaaaacacatattgacaacacatatagtgggagattcaacatccact tctcatcatagacagtttttaacgaactaacgagaatgcgtaactataga gatatgacatgaatttaccgaactactatattatataatataatgttata ttaataataatttcaagttaatt
quality values	Open. Hide. 61 30 28 32 61 31 35 47 61 61 39 61 55 47 47 61 38 38 61 61 61 49 61 49 61 61 37 33 14 28 28 16 23 49 45 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 55 55 59 61 52 61 61 61 61 61 61 61 52 61 36 52 49 59 61 59 59 59 52 41 49 59 59 59 59 59 59 59 59 59 61 44 59 59 59 59 41 43 59 59 55 59 59 52 61 61 59 59 59 61 61 61 61 61 59 44 52 52 39 43 45 59 59 61 59 61 61 61 61 59 59 61 52 52 59 59 61 61 61 61 59 59 59 59 59 59 59 59 59 59 59 61 61 61 59 61 61 59 59 61 61 61 59 61 59 59 59 61 55 43 59 59 59 59 59 59 59 59 59 59 52 59 52 49 52 45 59 59 59 59 59 59 61 59 59 59 59 61 52 59 59 59 59 59 59 61 61 61 52 61 43 52 52 49 59 59 59 59 52 59 49 52 59 59 59 49 59 55 43 59 52 43 52 52 59 61 61 59 49 59 52 52 52 59 61 61 61 61 59 59 59 59 59 61 61 61 61 61 59 61 59 59 59 59 44 59 61 52 61 49 49 43 55 55 55 61 61 61 55 55 61 61 52 52 52 52 52 55 55 52 40 40 52 55 55 55 61 52 61 55 52 52 52 55 55 52 55 52 55 55 52 52 52 55 55 52 52 55 55 55 55 50 50 61 61 61 50 55 55 55 61 61 55 61 55 55 55 55 55 55 55 50 55 55 55 61 50 50 55 55 50 50 61 55 61 55 55 55 55 55 55 55 55 55 55 55 55 61 61 50 61 50 47 50 50 50 61 53 52 53 53 61 53 50 47 50 43 43 50 50 52 52 52 52 50 50 47 61 61 61 61 61 50 61 47 38 61 50 50 61 50 47 43 50 42 40 50 61 61 32 61 43 50 50 50 53 61 53 61 50 53 52 61 61 61 61 61 53 61 61 47 61 47 47 50 53 38 61 43 53 61 53 61 43 47 52 50 43 43 53 47 47 45 50 53 46 53 46 53 47 42 47 47 47 47 57 53 47 53 53 47 53 53 53 53 53 50 50 47 53 52 52 52 45 52 57 57 57 52 57 57 53 57 57 57 53 53 53 53 52 53 57 57 53 52 42 47 33 47 53 53 57 53 57 53 45 50 47 45 53 42 39 45 47 57 45 33 38 27 32 32 52 42 53 52 47 45 53 46 53 45 23 47 53 47 32 36 30 40 28 42 35 45 50 47 32 47 31 32 57 47 50 50 47 53 57 57 53 45 40 52 50 52 53 30 32 47 35 43 47 37 30 39 52 57 32 53 23 50 30 40 23 53 47 33 52 52 38 57 33 57 34 52 52 57 57 57 57 57 42 38 38 46 46 46 34 31 50 53 57 33 21 52 28 53 37 28 34 31 36 34 21 30 57 57 33 46 38 21 32 36 37 20 37 38 25 43 37 40 33 53 41 36 37 29 33 21 57 37 33 30 29 33 53 41 34 48 19 44 31 30 57 41 35 19 19 20 22 40 33 27 37 30 37 18 20 45 24 30 30 30 29 32 25 51 51 30 31 24 29 29 29 39 51 44 27 23 11 23 23 15 16 46 24 27 23 12 12 5 9 8 9 29 21 51 51 51 17 21 29 31 6 34 20 28 43 28 27 29 27 34 31 22 19 18 13 24 30 51 51 23 27 28 19 41 19 22 31 30 34 23 25 51 51 29 21 27 21 19 21 33 30 21 21 51 29 22 24 21 24 21 29 28 29 29 28 46 36 21 23 19 30 24 30 19 21 30 29 29 26 30 34 31 51 46 23 27 21 33 46 46 24 28 25 26 31 29 23 51 29 24 21 51 29 23 46 46 38 38 18 5 16 12 36 17 13 29 28 18 44 22 29 10 29 51 33 17 19 39 12 35 51 28 25 23 28 19 33 38 25 21 51 14 27 15 14 15 20 23 19 8 5 8 15 22 17 14 19 34 22 17 20 13 15 21 14 25 23 34 16 13 30 26 23 31 19 9 5 18 25 20 28 18 19 39 21 10 19 19 21 9 26 18 15 34 28 14 16 11 17 14 10 27 14 12 9 5 6 5 4 4 8 5 12 6 5 5 7 15 26 10 13 4 16 9 17 9 10 9 5 7 36 9 16 14 34 14 7 4 15 24 18 15 5 17 12 14 15 21 24 16 10 21 8 8 5 6 5 6 8 13 21 4 6 9 14 3 8 3 4 3 9 14 6 15 9 6 11 15 7 14 26 13 4 6 6 24 17 36 22 16 7 26 19 6 7 7 6 9 10 10 8 6 16 4 5 13 27 8 20 7 19 9 9 13 18 6 3 5 4 3 15 9 2 7 4 5 4 3 4 20 5 5 6 4 2 4 8 4 3 3 3 5 15 3 9 6 2 4 2 4 2 2 4 7 3 4 4 9 17 6 13 10 4 3 3 2 4 1 7 5 9 5 4 6 5 6 10 8 7 8 10 8 5 8	Open. Hide. 61 61 52 49 61 43 38 21 26 28 24 30 36 52 37 49 61 59 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 59 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 55 55 59 61 61 61 59 61 59 61 59 59 59 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 59 59 59 59 59 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 55 55 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 59 61 61 61 61 61 61 55 59 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 59 61 59 59 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 55 55 44 55 61 61 61 61 61 61 55 55 61 61 61 61 55 55 61 55 61 61 61 55 61 61 61 55 61 55 55 52 61 61 61 55 52 61 55 55 55 55 55 61 55 61 55 61 61 61 61 61 61 61 55 61 61 61 55 55 55 61 61 61 55 55 55 55 61 55 61 61 55 55 55 55 55 55 55 61 61 61 61 61 55 55 55 55 55 55 55 50 55 55 50 55 55 50 55 55 61 55 61 61 61 55 50 61 61 53 61 47 47 50 50 61 61 61 61 61 50 61 53 61 61 61 61 61 53 61 50 50 47 50 61 50 61 61 61 50 53 53 61 52 53 61 61 61 53 52 53 50 47 50 50 50 53 53 50 53 52 50 47 52 50 61 45 53 61 61 61 61 39 61 61 53 53 61 61 61 61 61 61 43 45 50 47 52 50 47 36 52 53 53 53 50 52 57 57 47 53 57 53 43 47 47 47 47 45 53 45 52 47 43 47 57 47 47 57 57 47 47 57 53 57 57 47 47 57 53 53 52 52 47 53 53 47 53 45 53 47 47 53 50 47 47 42 35 47 38 50 43 53 57 47 47 57 50 57 39 37 53 47 53 50 53 45 52 45 52 40 52 53 53 53 57 45 50 52 43 47 45 50 53 33 52 53 53 47 46 35 50 52 45 41 52 57 53 52 35 52 52 50 47 46 50 45 46 27 30 46 53 41 39 53 37 52 40 53 50 52 57 30 52 53 52 40 52 38 32 50 37 47 46 52 39 38 42 42 57 37 38 53 50 35 50 38 30 34 38 40 38 37 33 37 31 13 36 37 38 37 34 32 39 33 31 41 46 52 37 37 20 37 42 44 37 36 42 39 32 38 37 42 42 52 39 38 57 57 38 40 36 38 35 40 19 32 30 40 36 27 57 37 21 40 23 44 31 33 33 27 53 57 44 35 34 32 37 28 28 37 34 35 27 26 48 48 39 41 30 28 30 29 30 30 33 32 30 30 28 47 30 29 27 44 39 23 30 24 14 44 44 31 29 32 29 32 14 29 32 27 37 28 48 23 28 29 29 51 30 18 30 18 28 36 30 29 29 28 27 23 19 34 30 46 29 27 29 29 21 29 29 29 19 22 25 41 46 25 21 43 39 41 23 32 28 43 33 21 21 29 35 19 25 20 29 29 29 28 34 29 19 26 30 24 25 23 23 29 31 51 51 30 28 29 28 29 24 28 51 29 23 16 20 20 19 36 30 30 31 27 21 26 28 34 24 26 29 27 29 23 18 23 16 34 31 51 31 7 9 23 36 29 16 22 23 31 35 33 19 29 24 29 29 23 14 30 31 27 31 30 18 22 30 34 17 19 28 34 15 9 20 13 24 24 35 15 17 39 28 13 26 29 33 23 14 19 22 15 32 13 20 31 10 9 19 22 19 19 27 33 20 14 16 15 12 22 19 31 33 15 13 6 19 6 13 13 16 8 6 14 10 8 18 14 26 25 25 13 15 8 39 18 12 18 23 21 20 39 20 17 31 22 19 36 12 24 26 29 22 18 25 34 11 9 6 11 5 10 13 17 23 20 13 5 4 14 5 4 7 3 5 29 8 9 5 6 19 42 16 5 5 30 5 18 19 26 6 7 19 3 7 5 4 12 14 6 4 6 11 7 9 8 3 3 5 3 3 3 11 9 20 36 30 30 14 6 18 12 8 14 18 7 5 6 18 12 4 7 5 6 10 5 9 11 10 7 13 13 7 5 13 10 4 10 4 5 10 17 6 9 13 17 6 4 3 14 4 7 27 30 12 4 5 6 14 27 5 1 2 4 3 4 6 9 4 3 5 4 17 6 4 4 5 7 16 5 10 4 9 4 23 3 6 6 8 8 5 6 9 3 8 3 2 3 3 8 7 7 4 20 7 4 5 5 5 5 18 13

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_44019728_44020966
seq2: B6Ng01-138A20.b_35_1249 (reverse)

seq1  GCTAAGGCTGATGAGGTGGCTCAGTGGGTAAAGACAGTTACCAACCACGC  50
      |||||||||||||||||| |      ||||||||| |||  ||     ||
seq2  GCTAAGGCTGATGAGGTGCC----ATGGTAAAGAC-GTTCACA-----GC  40

seq1  CTCGTGATGTGGGTTCAATCACTGGAAAACATCTGATGTTGGAAAGACAG  100
       ||  ||||||||| || || |||||||   ||||||||| |||||||||
seq2  GTC--GATGTGGGTCCATTC-CTGGAAA--CTCTGATGTT-GAAAGACAG  84

seq1  AATCTACTTTACAAAATTGTC-TTCTGACTTGTACAAACAACCTATGGAA  149
      ||||||| |||||||  |||| ||||||| ||||||    |||||| |||
seq2  AATCTAC-TTACAAA--TGTCTTTCTGAC-TGTACA---CACCTAT-GAA  126

seq1  TGTGAGCCAGCACATACATAATTAAATAAATATAACTCTTGAATA-TATG  198
      ||||||||||||||||||||| |||||||||||||||| |||||| ||||
seq2  TGTGAGCCAGCACATACATAA-TAAATAAATATAACTC-TGAATATTATG  174

seq1  TG-TAGAATCTATGGCAGTAGTAACAGTTTGCCATAGATAAGACTATAAT  247
      || |||||||||| |||||||| |||||||||||||||||||||||||||
seq2  TGTTAGAATCTAT-GCAGTAGT-ACAGTTTGCCATAGATAAGACTATAAT  222

seq1  GAACTCAATAATATGAGAAGGAAATTTAGTATTTACAATTTCTAAACTAT  297
      ||||||||| || |||||||||||||||||||||||||||||||||||||
seq2  GAACTCAAT-ATTTGAGAAGGAAATTTAGTATTTACAATTTCTAAACTAT  271

seq1  TTAATTTTTTAAAGAAATTACTAAAACTAAAAGAAGTAATTAAAGATTTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTTTAAAGAAATTACTAAAACTAAAAGAAGTAATTAAAGATTTG  321

seq1  AGATATATAAATAGCTGCATTTTCAAAA-CCAT-AAAATGTGTTCTATTC  395
      |||||||||||||||||||||||||||| |||| ||||||||||||||||
seq2  AGATATATAAATAGCTGCATTTTCAAAACCCATAAAAATGTGTTCTATTC  371

seq1  TGGGATAAAAATTGGGAGATAAATGTTGATTTCTAGCAAAACTGTTATTA  445
      || |||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGAGATAAAAATTGGAAGATAAATGTTGATTTCTAGCAAAACTGTTATTA  421

seq1  GGCAGATGGAATTTAGGCATTTATGAAAGAAGCCAATATGGGTTCACCAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGATGGAATTTAGGCATTTATGAAAGAAGCCAATATGGGTTCACCAA  471

seq1  AACTTCATATTCATTTCTTGTTTTTTTTTTTCTTTATAGTGTTACTTAGC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCATATTCATTTCTTGTTTTTTTTTTTCTTTATAGTGTTACTTAGC  521

seq1  CAGAAGCTTTGCTAGATTTTCTACTTAATGTTGATGTAGCTTTGAAAGAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCTTTGCTAGATTTTCTACTTAATGTTGATGTAGCTTTGAAAGAG  571

seq1  AGATGGGAAAATGGCAATATTCTCGCTGGATTCATGTAAGCAGTTATTTA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGAAAATGGCAATATTCTCGCTGGATTCATGTAAGCAGTTATTTA  621

seq1  TGAAGGTAGATTAGTAATTCCTGAAATTGCACTTCAAGGAATAAAACAAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTAGATTAGTAATTCCTGAAATTGCACTTCAAGGAATAAAACAAT  671

seq1  GACATCAAGCATAAACAGGTTCCTCTTCTAGATTTCATCTGTAAAATAAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCAAGCATAAACAGGTTCCTCTTCTAGATTTCATCTGTAAAATAAG  721

seq1  TAATAGGAGATTCATAACACTGGCCTATTGATATATATGAAGGAGATGCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGGAGATTCATAACACTGGCCTATTGATATATATGAAGGAGATGCA  771

seq1  TATGAAGAAATTACTAACTTCATGAGTTATCAGAGGAAATCCTGATCGTG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGAAATTACTAACTTCATGAGTTATCAGAGGAAATCCTGATCGTG  821

seq1  CTTGGAAAGGAAAATATTTCCCCTACATTTTTGTGCTTAATACTTAGTTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAAAGGAAAATATTTCCCCTACATTTTTGTGCTTAATACTTAGTTT  871

seq1  CTAGATGTTTATACTCTTTGGGAAGATTCTAGAACCTTTAGGAGGTGGAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATGTTTATACTCTTTGGGAAGATTCTAGAACCTTTAGGAGGTGGAG  921

seq1  ACATGCTGTGAGAAGTGAATACTGGCCATGCATGTTGAAGTTTTATAATC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTGTGAGAAGTGAATACTGGCCATGCATGTTGAAGTTTTATAATC  971

seq1  TAGCCCCATTTACAGTTCCCTTTGCTGACTAAAAATGTAATGTAAGCTGT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCCATTTACAGTTCCCTTTGCTGACTAAAAATGTAATGTAAGCTGT  1021

seq1  CAGCCTCCCACTTTTGATCCCCTACCTTCCAAACTAGGATTTAAAAAAAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCCCACTTTTGATCCCCTACCTTCCAAACTAGGATTTAAAAAAAA  1071

seq1  AAAAAGAAAAAGAAAATCCCCTCTCCTCAAACTCACTGATCAAAACCTTT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAAAGAAAATCCCCTCTCCTCAAACTCACTGATCAAAACCTTT  1121

seq1  TCTCCAATCAGTTGCCTCTTTCTGTGTACTTGTTGTCACAGAAGTGAGGA  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAATCAGTTGCCTCTTTCTGTGTACTTGTTGTCACAGAAGTGAGGA  1171

seq1  AGTAACTAATATGGATGGAAATGACCTGGCTTATAAATGAATTC  1239
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACTAATATGGATGGAAATGACCTGGCTTATAAATGAATTC  1215

BAC Information

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BAC

BAC End Information

Alignment Information