MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-140K11
Chromosome	X (Build37)
Map Location	106,556,515 - 106,557,543
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Gm378, LOC668516, Gm379, Brwd3, 5730416F02Rik, Nsbp1, Sh3bgrl, EG622976, LOC100042831
Downstream gene	LOC213474, LOC245573
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gm378 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213454 MGI:2685224
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC668516 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668516
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Gm379 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:236954 MGI:2685225
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Brwd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382236 MGI:3029414
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5730416F02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70550 MGI:1917800
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Nsbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50887 MGI:1355295
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sh3bgrl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56726 MGI:1930849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622976 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622976 MGI:3647255
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042831 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042831
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins

name	LOC213474 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:213474
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 19 ESTs, 4 Proteins pseudo : _no_value

name	LOC245573 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:245573
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 ESTs, 25 Proteins pseudo : _no_value

name	Gm378 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38086586 GeneID:213454 MGI:2685224
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : gene model 378, (NCBI) transcript_id : XM_142049.3

name	Gm379 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83003240 GeneID:236954 MGI:2685225
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : gene model 379, (NCBI) transcript_id : XM_142052.4

name	Brwd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125490357 GeneID:382236 MGI:3029414
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bromodomain and WD repeat domain containing 3 transcript_id : NM_001081477.1

name	Nsbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778914 GeneID:50887 MGI:1355295
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleosome binding protein 1 transcript_id : NM_016710.2

name	Sh3bgrl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543698 GeneID:56726 MGI:1930849
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SH3-binding domain glutamic acid-rich protein like transcript_id : NM_019989.2

name	EG622976 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85702299 GeneID:622976 MGI:3647255
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG622976 transcript_id : NM_001037917.1

name	LOC100042831 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271826 GeneID:100042831
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins product : similar to DnaJ (Hsp40) homolog, subfamily C, member 5 beta transcript_id : XM_001478909.1

name	Gm378 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38086587 GeneID:213454 MGI:2685224
definition	codon_start : 1 product : similar to BMI1-like protein protein_id : XP_142049.3

name	Gm379 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20985090 GeneID:236954 MGI:2685225
definition	codon_start : 1 product : similar to syntaxin 3A protein_id : XP_142052.1

name	Brwd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125490358 GeneID:382236 MGI:3029414
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : bromo domain-containing protein disrupted in leukemia product : bromodomain and WD repeat domain containing 3 protein_id : NP_001074946.1

name	Nsbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133778915 GeneID:50887 MGI:1355295
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005654 - nucleoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006356 - regulation of transcription from RNA polymerase I promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : nucleosome binding protein 45; snoRNA MBII-8 product : nucleosome binding protein 1 protein_id : NP_057919.2

name	Sh3bgrl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910548 GeneID:56726 MGI:1930849
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : SH3-binding domain glutamic acid-rich protein like protein_id : NP_064373.1

name	EG622976 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702300 CCDS:CCDS30354.1 GeneID:622976 MGI:3647255
definition	codon_start : 1 product : hypothetical protein LOC622976 protein_id : NP_001033006.1

name	LOC100042831 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271827 GeneID:100042831
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478959.1

name	LOC668516 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668516
definition	number : 1 pseudo : _no_value

name	LOC668516 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668516
definition	number : 2 pseudo : _no_value

name	LOC668516 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668516
definition	number : 3 pseudo : _no_value

name	LOC668516 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668516
definition	number : 4 pseudo : _no_value

name	5730416F02Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149271862 GeneID:70550 MGI:1917800
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5730416F02 gene transcript_id : XR_001637.2

name	LOC213474 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271828 GeneID:213474
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 19 ESTs, 4 Proteins product : similar to eukaryotic translation initiation factor 4B pseudo : _no_value transcript_id : XR_033986.1

name	LOC245573 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271863 GeneID:245573
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 ESTs, 25 Proteins product : similar to nuclear pore-targeting complex component of 58 kDa pseudo : _no_value transcript_id : XR_034361.1

clone name	MSMg01-334E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159F21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-502P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222J20
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-140K11.b	B6Ng01-140K11.g
ACC	DH939324	DH939325
length	1,163	1,022
definition	DH939324\|Mus musculus domesticus DNA, BAC clone: B6Ng01-140K11, 5' end.	DH939325\|Mus musculus domesticus DNA, BAC clone: B6Ng01-140K11, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcaactgaggaatacagaatagctgagaagtacatgaaaaaaat gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga ttccacctcacactagtcagaatggctaagttcaaacatacaggtgacag cagatgctggtgaggatgtggagaaaaaggaacactcctccatttttggt gggactgcaagcttgtacaactactctggaaatcagtctggccattcctc agaaaattggacatagtactaccggaggatcccgaaatacctctcctggg catatatccagaagatgttccaactggtaagaaggaaacatgctccacta ttttcatagcagacttatttataaaagccagaagctggaaagaacccaga tgcccctcaacagaggaatggatacagaaaatgtggtacatttacacaat ggggtactactcagctattaaaaagaatgaatttatgaaattcctattca aatggatggacctggagggcatcatcctgagtgaggtaacccaattacaa aagaattcacacaatatgtactcactgataagtggatattagtccagaaa cttagaatacccaaaatataacatacaatttgcaaaacacaggaatctca agatgaacgaagaccaaagtgtgtacactttgccccttgttagaatttgg aacaaaacacccatggaaggagttacagagacaaagtttggagctgaaac gaaaggatggaccatctagaaactgccatatccaggtatccatcccacaa tcatcttccaaacgctgacaccatttcatacactgacaagattttgctga aagtacccagatatagctgtctcttgtgagactatgcaggcgcctagcaa acacagaagtggatgctcacagtcagctattggatagatcacagggcccc aatggaggagctagagaaagtaaccaaggagctaaagggaactgcaaccc tataggtggaaaacaatatgaactaacagtaccccctgggcctagttcct agctgcaattgatcaaagatggcctagcagccatcgtgaaagaaggcatt ggtctgcaactttattgcttcagtacaggggacccagggcagatatgatg ttgtgtgggaggt	gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg tcaaatgctgagtttcacttaaaacaaagcaaatgtgaaaagatattttt gagaagaatataaagttgaatataaaagcttgttgaatgacagtgagtaa aagttgttaattggggatgccatagatgtaatactatcgttgttatcctg ctgaaagtatttgtgagtaaatgacatgtctgtagtttgttttgaagtta tcccacaagaaaaagttaagaatgggtagggaagagaggaaaatagatgt attcaagattgcaaagaatcggtaattatttagctcagcttaaacataga tagttattcatggcattatcaattttatgttttagaaaataaaagtataa aatgtaaatgagccccattaggttcatatgcctatggagaatagaaaatg tcctccctaacatttatgagacacctagggaagtagtttgactttggaga acagctccattgataatgaattttcaagttatgatacaatttctttggat taagcccagcagatataaattctgaattactgactgtataacagtgagaa aggtatgtaactttataaaatctattccttctccacttttaatggaataa tgatggtagtaactgcacagaggtataatgaattattgctaaaataaacc ttataaaatgatagtgcagtatatggtgcataataatagtccaataaaag ttaattgttttgttaatcatcagtttaaggcaccattgtaaagaagagat gaatgcttaaattactgtttgcagcatcatagaattcccagactggatgc gatgtgtagaaatcatctggtatctttaaatagtctgaacctagctcaca gaaagaattttctattgatgcaggcatacacatacacaaaaaaatagtat aagaactaccttatttcactcatgagatgactacattgcatttatcattt aagaaaaaaaatttggattctg
quality values	Open. 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Hide. 61 47 61 49 61 21 24 10 19 14 19 20 27 25 59 59 59 21 59 59 59 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 59 45 50 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 59 59 61 61 61 61 61 59 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 44 59 61 61 61 61 61 61 61 61 59 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 50 50 50 50 50 55 61 55 61 61 61 61 61 61 55 55 55 61 61 61 55 61 61 61 61 55 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 53 61 50 50 53 34 34 47 53 61 61 50 61 61 61 61 61 61 61 50 61 61 53 53 61 50 53 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 53 53 52 53 53 53 61 27 53 53 61 61 45 52 53 53 61 61 47 47 61 61 47 61 42 47 61 46 53 53 47 47 53 38 50 53 61 53 61 61 42 61 53 57 57 57 57 53 43 42 39 53 52 53 47 53 34 50 53 45 45 42 30 53 53 39 57 57 43 57 53 53 53 57 50 39 47 42 57 53 57 42 42 50 57 34 45 47 45 53 53 53 53 52 57 50 53 53 57 43 38 53 24 52 53 57 45 53 57 53 57 57 53 30 53 21 31 31 53 47 38 50 45 53 53 45 39 52 53 38 40 41 53 34 33 42 53 53 50 34 47 43 57 33 19 29 39 34 57 30 52 42 34 53 57 28 45 46 38 36 57 50 50 53 50 30 53 45 24 45 24 46 27 30 38 30 34 38 38 21 46 23 50 42 22 46 37 33 45 42 57 46 24 33 17 39 47 23 47 24 46 31 33 37 53 57 50 30 42 42 24 37 36 38 34 35 42 28 38 42 42 34 38 28 26 19 40 37 31 40 53 40 36 33 27 27 52 40 29 23 33 12 53 32 29 53 53 44 33 37 35 29 47 24 57 29 9 57 57 37 26 13 17 14 40 33 40 33 33 35 31 29 41 57 17 8 30 7 17 12 23 15 20 18 22 14 27 18 46 46 30 20 31 22 9 32 22 31 18 29 31 27 29 29 31 28 29 18 51 18 20 33 25 29 30 30 14 29 27 17 29 21 25 29 23 29 28 24 20 27 19 27 18 33 25 23 25 16 18 18 28 18 28 29 29 20 23 29 29 24 43 34 38 24 29 24 28 12 30 51 12 17 14 22 28 24 21 29 41 17 28 30 34 23 51 29 25 41 23 14 21 26 20 23 29 17 15 30 16 28 33 33 23 27 31 29 20 39 13 12 31 26 31 25 29 21 21 46 41 21 26 15 21 23 23 34 16 11 24 30 14 16 29 12 13 29 16 26 11 20 7 12 6 29 15 26 23 31 38 31 36 38 10 30 6 5 7 10 14 28 20 19 19 23 20 14 19 26 28 25 34 28 26 51 15 12 17 7 10 7 16 23 31 26 8 7 6 32 17 15 21 16 30 8 7 6 10 11 20 34 30 11 4 7 8 4 4 35 14 17 19 11 12 32 23 19 12 6 10 9 9 30 17 7 10 7 11 6 5 4 4

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_106556515_106557543
seq2: B6Ng01-140K11.g_68_1089 (reverse)

seq1  CAGAATACAAA-TTATTTTCTTAAATTGGAATAAAATGCAATGTAGTCAT  49
      |||||| |||| || |||||||||||  ||   |||||||||||||||||
seq2  CAGAATCCAAATTTTTTTTCTTAAAT--GA--TAAATGCAATGTAGTCAT  46

seq1  CTCATGAGTGAAATAAGGTAGTTCTTATACTAATTTTTTTTGTGTATGTG  99
      ||||||||||||||||||||||||||||||||  ||||||||||||||||
seq2  CTCATGAGTGAAATAAGGTAGTTCTTATACTA--TTTTTTTGTGTATGTG  94

seq1  TATGCCTGCATCAATAGAAAATTCTTTCTGGTGAGCTAGGTTCAGACTAT  149
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TATGCCTGCATCAATAGAAAATTCTTTCT-GTGAGCTAGGTTCAGACTAT  143

seq1  TTAAAGATACCAGATGATTTCTACACATCGCATCCAGTCTGGGAATTCTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGATACCAGATGATTTCTACACATCGCATCCAGTCTGGGAATTCTA  193

seq1  TGATGCTGCAAACAGTAATTTAAGCATTCATCTCTTCTTTTACAATGGTG  249
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGATGCTGCAAACAGTAATTTAAGCATTCATCTCTTC-TTTACAATGGTG  242

seq1  CCTTAAACTGATGATTAACAAAACAATTAACTTTTATTGGACTATTATTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAACTGATGATTAACAAAACAATTAACTTTTATTGGACTATTATTA  292

seq1  TGCACCATATACTGCACTATCATTTTATAAGGTTTATTTTAGCAATAATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCATATACTGCACTATCATTTTATAAGGTTTATTTTAGCAATAATT  342

seq1  CATTATACCTCTGTGCAGTTACTACCATCATTATTCCATTAAAAGTGGAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATACCTCTGTGCAGTTACTACCATCATTATTCCATTAAAAGTGGAG  392

seq1  AAGGAATAGATTTTATAAAGTTACATACCTTTCTCACTGTTATACAGTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATAGATTTTATAAAGTTACATACCTTTCTCACTGTTATACAGTCA  442

seq1  GTAATTCAGAATTTATATCTGCTGGGCTTAATCCAAAGAAATTGTATCAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCAGAATTTATATCTGCTGGGCTTAATCCAAAGAAATTGTATCAT  492

seq1  AACTTGAAAATTCATTATCAATGGAGCTGTTCTCCAAAGTCAAACTACTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGAAAATTCATTATCAATGGAGCTGTTCTCCAAAGTCAAACTACTT  542

seq1  CCCTAGGTGTCTCATAAATGTTAGGGAGGACATTTTCTATTCTCCATAGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGGTGTCTCATAAATGTTAGGGAGGACATTTTCTATTCTCCATAGG  592

seq1  CATATGAACCTAATGGGGCTCATTTACATTTTATACTTTTATTTTCTAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGAACCTAATGGGGCTCATTTACATTTTATACTTTTATTTTCTAAA  642

seq1  ACATAAAATTGATAATGCCATGAATAACTATCTATGTTTAAGCTGAGCTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAATTGATAATGCCATGAATAACTATCTATGTTTAAGCTGAGCTA  692

seq1  AATAATTACCGATTCTTTGCAATCTTGAATACATCTATTTTCCTCTCTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTACCGATTCTTTGCAATCTTGAATACATCTATTTTCCTCTCTTC  742

seq1  CCTACCCATTCTTAACTTTTTCTTGTGGGATAACTTCAAAACAAACTACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCCATTCTTAACTTTTTCTTGTGGGATAACTTCAAAACAAACTACA  792

seq1  GACATGTCATTTACTCACAAATACTTTCAGCAGGATAACAACGATAGTAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGTCATTTACTCACAAATACTTTCAGCAGGATAACAACGATAGTAT  842

seq1  TACATCTATGGCATCCCCAATTAACAACTTTTACTCACTGTCATTCAACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCTATGGCATCCCCAATTAACAACTTTTACTCACTGTCATTCAACA  892

seq1  AGCTTTTATATTCAACTTTATATTCTTCTCAAAAATATCTTTTCACATTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTATATTCAACTTTATATTCTTCTCAAAAATATCTTTTCACATTT  942

seq1  GCTTTGTTTTAAGTGAAACTCAGCATTTGACAAGATCCAACACCCATTCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTTTTAAGTGAAACTCAGCATTTGACAAGATCCAACACCCATTCA  992

seq1  TGATAAAAGTTTTGGAAAGATCAGGAATTC  1029
      ||||||||||||||||||||||||||||||
seq2  TGATAAAAGTTTTGGAAAGATCAGGAATTC  1022

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information