BAC Information

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BAC

Clone NameB6Ng01-141B19
ChromosomeX (Build37)
Map Location 110,292,427 - 110,477,727
singlet/doubletdoublet
Overlap geneChm, EG664918, Dach2
Upstream gene4933403O08Rik, EG385407, Apool, Satl1, EG623341, 2010106E10Rik, Zfp711, Pof1b, LOC623412, EG623428, LOC100039112
Downstream geneLOC237016, EG664945, EG634881, LOC100039201
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141B19.bB6Ng01-141B19.g
ACCDH939655DH939656
length1,101111
definitionDH939655|Mus musculus domesticus DNA, BAC clone: B6Ng01-141B19, 5' end.DH939656|Mus musculus domesticus DNA, BAC clone: B6Ng01-141B19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,476,620 - 110,477,727)(110,292,427 - 110,292,537)
sequence
gaattctcatcaaggaaacagtgagtaatctggtgcatacaaacacaata
aacaaataacttaatatacttctcaagatttttgtttattagaagagtta
aatatagtttagaaatacatatgttcttgactaaattcttaaagttgcac
ccacttctacataaatgtgaacatctctatccatgttcatcctttaagtg
aaaaacagtgactaatttagcaacacgttattgtttctgagtgacagctt
tccttcctctggaaagagcaaagatcaggtcaatagcccaaatgcaaaac
agaaatggcattccaaattcaggaaagagactagtcaagaaaggtccaca
agtagaatttcaaagaaaatgcacttgataaatgaagaaccacctttctg
tgtcatgaagacatacaagctgcaaaggaatgcacttctttcaaggcctt
acttctaggcatgtcaaaatgtgaacatcagtctgacattcaatacttta
gaatgtgtacacaaaagacaataaataactacaacttcaacagtcaaatg
aacagcaaagggctatttctccaaggtctatatgtccctttggcagagag
acaaactgtgatgtcccttatagtttgcacctttcctggaaaacaaaagt
tgtcaggatgatctatgaactgatagcaagctcctcattataaagacatc
tcccaactctattttcaaatacaagaaaaataggaatttctttcatctga
catcaaataaatgatggaaagtttaaagggtgtgctctttactatgtaaa
catacaaaaggaacatacatttatttaatacagataattatgcaaggtta
tttttttagcaccagaatgcaaagtttccttgaattcaatgattaaaatt
tgttcattactgggatttcaaactctacaggagtattaacacagaaaagt
gttttacaaaaatacagaaaataagagaaatcaaaagatataagttaaag
aagaaagaaattttcctttgatatctcacattaaaaaggagcacacatgc
agtatttgtgctcatgtgttgcatacttcagtctcaattgtcctatagtc
c
aactgaaacaacatgtatcctaaaacatgactaaattttctgctctcatt
gctttagtgactctaattctccggcttggggtttgggtttttttttttgg
ggtgggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_110476620_110477727
seq2: B6Ng01-141B19.b_50_1150 (reverse)

seq1  GGACTATAGGACAATAGAGGACTGAAGTATGGCCACACCATGAGCACCAA  50
      ||||||||||||||| || ||||||||||| || ||| |||||||| |||
seq2  GGACTATAGGACAATTGA-GACTGAAGTAT-GCAACA-CATGAGCA-CAA  46

seq1  ATACTGCATGTGTGCTCCTTTTTTAAATGTGAGATATCAAAGGAAAATTT  100
      |||||||||||||||||||||||  |||||||||||||||||||||||||
seq2  ATACTGCATGTGTGCTCCTTTTT--AATGTGAGATATCAAAGGAAAATTT  94

seq1  CTTTCTTCTTTTAACTTATATCTTTTGATTTCTCTTATTTTCTGTATTTT  150
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTC-TTTAACTTATATCTTTTGATTTCTCTTATTTTCTGTATTTT  143

seq1  TGTAAAACACTTTTCTGTGTTAATACTCCTGTAAGAGTTTGAAATCCCAG  200
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGTAAAACACTTTTCTGTGTTAATACTCCTGT-AGAGTTTGAAATCCCAG  192

seq1  TAATGAACAAATTTTAATCATTGAATTCAAGGAAACTTTGCATTCTGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAACAAATTTTAATCATTGAATTCAAGGAAACTTTGCATTCTGGTG  242

seq1  CT-AAAAAATAACCTTGCATAATTATCTGTATTAAATAAATGTATGTTCC  299
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAAAATAACCTTGCATAATTATCTGTATTAAATAAATGTATGTTCC  292

seq1  TTTTGTATGTTTACATAGTAAAGAGCACACCCTTTAAACTTTCCATCATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTATGTTTACATAGTAAAGAGCACACCCTTTAAACTTTCCATCATT  342

seq1  TATTTGATGTCAGATGAAAGAAATTCCTATTTTTCTTGTATTTGAAAATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGATGTCAGATGAAAGAAATTCCTATTTTTCTTGTATTTGAAAATA  392

seq1  GAGTTGGGAGATGTCTTTATAATGAGGAGCTTGCTATCAGTTCATAGATC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGGGAGATGTCTTTATAATGAGGAGCTTGCTATCAGTTCATAGATC  442

seq1  ATCCTGACAACTTTTGTTTTCCAGGAAAGGTGCAAACTATAAGGGACATC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGACAACTTTTGTTTTCCAGGAAAGGTGCAAACTATAAGGGACATC  492

seq1  ACAGTTTGTCTCTCTGCCAAAGGGACATATAGACCTTGGAGAAATAGCCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTGTCTCTCTGCCAAAGGGACATATAGACCTTGGAGAAATAGCCC  542

seq1  TTTGCTGTTCATTTGACTGTTGAAGTTGTAGTTATTTATTGTCTTTTGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGTTCATTTGACTGTTGAAGTTGTAGTTATTTATTGTCTTTTGTG  592

seq1  TACACATTCTAAAGTATTGAATGTCAGACTGATGTTCACATTTTGACATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATTCTAAAGTATTGAATGTCAGACTGATGTTCACATTTTGACATG  642

seq1  CCTAGAAGTAAGGCCTTGAAAGAAGTGCATTCCTTTGCAGCTTGTATGTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAAGTAAGGCCTTGAAAGAAGTGCATTCCTTTGCAGCTTGTATGTC  692

seq1  TTCATGACACAGAAAGGTGGTTCTTCATTTATCAAGTGCATTTTCTTTGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGACACAGAAAGGTGGTTCTTCATTTATCAAGTGCATTTTCTTTGA  742

seq1  AATTCTACTTGTGGACCTTTCTTGACTAGTCTCTTTCCTGAATTTGGAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTACTTGTGGACCTTTCTTGACTAGTCTCTTTCCTGAATTTGGAAT  792

seq1  GCCATTTCTGTTTTGCATTTGGGCTATTGACCTGATCTTTGCTCTTTCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTTCTGTTTTGCATTTGGGCTATTGACCTGATCTTTGCTCTTTCCA  842

seq1  GAGGAAGGAAAGCTGTCACTCAGAAACAATAACGTGTTGCTAAATTAGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGGAAAGCTGTCACTCAGAAACAATAACGTGTTGCTAAATTAGTC  892

seq1  ACTGTTTTTCACTTAAAGGATGAACATGGATAGAGATGTTCACATTTATG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTTTCACTTAAAGGATGAACATGGATAGAGATGTTCACATTTATG  942

seq1  TAGAAGTGGGTGCAACTTTAAGAATTTAGTCAAGAACATATGTATTTCTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTGGGTGCAACTTTAAGAATTTAGTCAAGAACATATGTATTTCTA  992

seq1  AACTATATTTAACTCTTCTAATAAACAAAAATCTTGAGAAGTATATTAAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATATTTAACTCTTCTAATAAACAAAAATCTTGAGAAGTATATTAAG  1042

seq1  TTATTTGTTTATTGTGTTTGTATGCACCAGATTACTCACTGTTTCCTTGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGTTTATTGTGTTTGTATGCACCAGATTACTCACTGTTTCCTTGA  1092

seq1  TGAGAATTC  1108
      |||||||||
seq2  TGAGAATTC  1101

seq1: chrX_110292427_110292537
seq2: B6Ng01-141B19.g_72_182

seq1  AACTGAAACAACATGTATCCTAAAACATGACTAAATTTTCTGCTCTCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAACAACATGTATCCTAAAACATGACTAAATTTTCTGCTCTCATT  50

seq1  GCTTTAGTGACTCTAATTCTCCGGCTTGGGGTTTGGGTTTTTTTTTTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAGTGACTCTAATTCTCCGGCTTGGGGTTTGGGTTTTTTTTTTTGG  100

seq1  GGTGGGGGGGG  111
      |||||||||||
seq2  GGTGGGGGGGG  111