BAC Information

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BAC

Clone NameB6Ng01-141J24
ChromosomeX (Build37)
Map Location 63,274,592 - 63,275,600
singlet/doubletsinglet
Overlap genenone
Upstream geneCtag2, LOC671840
Downstream geneSlitrk2, LOC666824, LOC627734
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141J24.bB6Ng01-141J24.g
ACCDH940034DH940035
length1,0001,159
definitionDH940034|Mus musculus domesticus DNA, BAC clone: B6Ng01-141J24, 5' end.DH940035|Mus musculus domesticus DNA, BAC clone: B6Ng01-141J24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagcccatctcctctaaactgaacacctctcattattgctgaac
cattgaaagaagcaaagtatagaagacagaataaaatggtcatggtattt
attctcaaagaggtgatagcaaaagcttggagactccaattccattcatt
cagaggggttcactatctggatgggtaatgggggcatagactgaaaaagt
ataatatgtaacaaaccatttattttgttgtacttttggttcacatgata
gtttcagatataccagctcacaaagaaatcttactaaaagaatttaaacc
agcatcatttgtaatagcaaaatactgggattattttagaggccctcatg
taagggaaattaaatatatcaaagcatatccactcacttaaatactatgg
agttatcaaaactgatagcttagaaaaacacaagacttttgagcttgtga
aatgtcttggtgggtaaaggtgcttgctgctaacccagagcacttgagtt
taatatctgggtctctctcacatggtgaaaacagacaactgactctgcca
agttgtcctctgacctccacacaaacaccaagacatatacatgcacacaa
acacacaatcaatcaatcaaaaatataaaattaaaatactgggcttaata
acacagtctgcttagcatgtattaggccctatgctcaattctcaacacat
ttaactaaattaaaataaaatatcatattttataaaatggtttatcatat
ttgataatggaagcaaattataagagaaattttacacatataaatatata
caaactataaatacgtacatacatacgtacatacagtagattgacagaac
tgaattacactgattcaaaagtactcagttgttatataaaaattgtatca
tcaagttattaaacaactagtaccttggttagacttgatgggaatagtat
aatttagaaatcagcaaatatatatatatatatatatatatatgtatata

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttccacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttggacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggagtatccagcaatacctctcctgggc
atatatccagaagatgccccacctggtaagaaggacacatgctccactat
gttcatagaagccttatttataatagccagaagctggaaaaaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gtgtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaaaactgaagtgtggtcactatgcccctccttagaattgggaa
caaaacacccatggaaaggagttacaaagacaaagtttgaagctgagatg
aaaggatggaccatctaaagactgcaatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatatatataccagcaagattttat
cgaaaggacccagatgtagctgtctcttgtgagactaatgccggggccta
gcaaacacagaagtggatgctcacagtcagctaatggatgatcacaggct
cccaatggagagctagagatgtacccgagagtaagggatctgtaaccttt
taggtggacacatatgactacagtacctcgagctcttgactctagctgat
agtacaaaagaggcctagtcggccatcactggaagagagcccattggact
ggcactaatgctccagatcagggaatgccaagtcaaaatgagaatggtgg
ctagcgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_63274592_63275600
seq2: B6Ng01-141J24.b_48_1047 (reverse)

seq1  TATATACATATATACATATATATATATATATATATATATATTTTGCTGAT  50
              |||||||||||||||||||||||||||||||| |||||||||
seq2  --------TATATACATATATATATATATATATATATATA-TTTGCTGAT  41

seq1  TTCTAAATTATACTTATTCCCATCAAGTCTAACCAAGGTACTAGTTGTTT  100
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTCTAAATTATAC-TATTCCCATCAAGTCTAACCAAGGTACTAGTTGTTT  90

seq1  AATAACTTGATGATACAATTTTTATATAACAACTG-GTACTTTTGAATCA  149
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AATAACTTGATGATACAATTTTTATATAACAACTGAGTACTTTTGAATCA  140

seq1  GTGTAATTCAGTTCTGTCAATCTACTGTATGTACGTATGTATGTACGTAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATTCAGTTCTGTCAATCTACTGTATGTACGTATGTATGTACGTAT  190

seq1  TTATAGTTTGTATATATTTATATGTGTAAAATTTCTCTTATAATTTGCTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTTTGTATATATTTATATGTGTAAAATTTCTCTTATAATTTGCTT  240

seq1  CCATTATCAAATATGATAAACCATTTTATAAAATATGATATTTTATTTTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTATCAAATATGATAAACCATTTTATAAAATATGATATTTTATTTTA  290

seq1  ATTTAGTTAAATGTGTTGAGAATTGAGCATAGGGCCTAATACATGCTAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTTAAATGTGTTGAGAATTGAGCATAGGGCCTAATACATGCTAAG  340

seq1  CAGACTGTGTTATTAAGCCCAGTATTTTAATTTTATATTTTTGATTGATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGTGTTATTAAGCCCAGTATTTTAATTTTATATTTTTGATTGATT  390

seq1  GATTGTGTGTTTGTGTGCATGTATATGTCTTGGTGTTTGTGTGGAGGTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTGTGTTTGTGTGCATGTATATGTCTTGGTGTTTGTGTGGAGGTCA  440

seq1  GAGGACAACTTGGCAGAGTCAGTTGTCTGTTTTCACCATGTGAGAGAGAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACAACTTGGCAGAGTCAGTTGTCTGTTTTCACCATGTGAGAGAGAC  490

seq1  CCAGATATTAAACTCAAGTGCTCTGGGTTAGCAGCAAGCACCTTTACCCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATATTAAACTCAAGTGCTCTGGGTTAGCAGCAAGCACCTTTACCCA  540

seq1  CCAAGACATTTCACAAGCTCAAAAGTCTTGTGTTTTTCTAAGCTATCAGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGACATTTCACAAGCTCAAAAGTCTTGTGTTTTTCTAAGCTATCAGT  590

seq1  TTTGATAACTCCATAGTATTTAAGTGAGTGGATATGCTTTGATATATTTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATAACTCCATAGTATTTAAGTGAGTGGATATGCTTTGATATATTTA  640

seq1  ATTTCCCTTACATGAGGGCCTCTAAAATAATCCCAGTATTTTGCTATTAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCTTACATGAGGGCCTCTAAAATAATCCCAGTATTTTGCTATTAC  690

seq1  AAATGATGCTGGTTTAAATTCTTTTAGTAAGATTTCTTTGTGAGCTGGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATGCTGGTTTAAATTCTTTTAGTAAGATTTCTTTGTGAGCTGGTA  740

seq1  TATCTGAAACTATCATGTGAACCAAAAGTACAACAAAATAAATGGTTTGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGAAACTATCATGTGAACCAAAAGTACAACAAAATAAATGGTTTGT  790

seq1  TACATATTATACTTTTTCAGTCTATGCCCCCATTACCCATCCAGATAGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATTATACTTTTTCAGTCTATGCCCCCATTACCCATCCAGATAGTG  840

seq1  AACCCCTCTGAATGAATGGAATTGGAGTCTCCAAGCTTTTGCTATCACCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCTCTGAATGAATGGAATTGGAGTCTCCAAGCTTTTGCTATCACCT  890

seq1  CTTTGAGAATAAATACCATGACCATTTTATTCTGTCTTCTATACTTTGCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGAATAAATACCATGACCATTTTATTCTGTCTTCTATACTTTGCT  940

seq1  TCTTTCAATGGTTCAGCAATAATGAGAGGTGTTCAGTTTAGAGGAGATGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCAATGGTTCAGCAATAATGAGAGGTGTTCAGTTTAGAGGAGATGG  990

seq1  GCTTGAATTC  1009
      ||||||||||
seq2  GCTTGAATTC  1000