BAC Information

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BAC

Clone NameB6Ng01-143L12
ChromosomeX (Build37)
Map Location 125,097,222 - 125,098,286
singlet/doubletsinglet
Overlap genenone
Upstream gene4930412D23Rik, LOC385523, LOC100040516, Mdm4-ps, EG237030, LOC100040538
Downstream geneLOC100040550, LOC100040562, LOC100040570, LOC669120
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143L12.bB6Ng01-143L12.g
ACCDH941582DH941583
length1,2121,049
definitionDH941582|Mus musculus domesticus DNA, BAC clone: B6Ng01-143L12, 5' end.DH941583|Mus musculus domesticus DNA, BAC clone: B6Ng01-143L12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacacaaacatagtgaaagcaatatacagaatacca
gtagccaatatcaaactaaaatcaaggactagacaaggctgtccactctc
tctctatctagtcaatatagtacctgaagttctagctagagaaattagac
aacaaagggagatcaaagggataaaaaaaggaaaggaagaagtcaaaata
ttactatttgcagatgatatgatagtataattgagtgacccaaaaatttc
agaggagaacttgaacagctgataaacaacttaagcaaagtgggtggata
taaaattaactcaaataaatatggagccttctaatactcaaagaatacat
aggctgaaaaagtaattatggaaatgacacccttcagcatagtcacaaac
aatataaaatatcttggagtgtctctaaccaaacaagtgaagcatctcta
tgacaaggacttcaagtctctgaagaaagacattaaagaagacctcagaa
gatgctcgtggattgacaggattaatatagtaaaaatggccatttttgcc
aagagcaatcctcaaattcagtacaatcaccatcaaaattctaactcagt
tcctcatagaattagaaagagcatttctcaaattcatttggaataacaaa
aaaacgggatagtgaaaactattctcaacaataaaagaacttctggtgga
atcaccatccttgacctcaactgtactgcagagcaatagtgataaaaact
gcattgtactggtacagtgacaggcaggtagatcaagaaatagaattgaa
aaccaagaaatgaacccatacacctatgttcacttgatctttgacaaaga
agctaaaccatccaatggaaaaagacaaacattttcacaaatggtgcttg
ttcaactggcagtcaacaggtagaagaatgcaatttatccattcttatct
ccaggtgcaaactcaagtccaagtggatcaaagacctcacattaaacaga
tacactgatctgataaaagagaaagtgggcaaacctggaacatatgggta
catgggaaacatttctaacaccaatgatgtgttaaagatcagaattgaca
atgggactctaaatgccaaccttgtagcaatgaactgtcatgacaaccga
cacgaatgagatcacttatgaggctgatccattatgcagactcagaagtt
agaactctggga
gaattcccaagtctccatcattaactgatgagttattgataattcatgct
tggaaaaggagtgagggtcagtttttcttaagggaatgggctctgttagg
tcaaccatgctcaaggggatgccctcccatgttgagcctgataggttatt
tttaaaaaaagaaaccaaggacagaaagttaggggagtaagaaagtgggg
atgagtgtggcaggagtcaaagggaggaatgaggagtgaatatgatccaa
ttacattgataaaattcttcacaaattaataaaagtattataataaaaaa
atcaaaattcactactagacacaaatgtgaatatatttgcattaagctcc
taggttgaagaacacctagcctgcatataaaactgggctattatgaacaa
taaagagaaataaacttgtgtatgtgtttttctgttgattcagactttca
gtttattctaaggagtcaggtaactggatgctaaggcacttctattcttt
gtttttgacaaacctccttattgatgcttcagtgactatactggttcaca
ttatcattatctgtgtatgagtgatcagtgtatcatttacattattatgt
tagtagccttttattgtttattataattattttaatgttaatgattttat
tgtttcattcattttattaatttatctagctaataattatgatccctatt
ttgacatgggtgggaagtaatcaacataattttaatttgcattgctttga
aggataacgatattgaatatttttcatgtgcctactgatcatccaaataa
atgttttgttttacttttctttttctttcttctttttttctttctttctt
tttttcctttttttttttttttttggattttgggagaataatcatgctgg
tgtagcaagaaactaaggtcaacttgctttgtagctcaccactggacctg
gaacttccaagctgccacagctctctcagggctagattacaggtatggtg
ttaaggtcgcctagcaaatatgccttatttgtgggccaatatagaattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_125097222_125098286
seq2: B6Ng01-143L12.g_69_1117

seq1  GAATTCCCAAGTCTCCATCATTAACTGATGAGTTATTGATAATTCATGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAGTCTCCATCATTAACTGATGAGTTATTGATAATTCATGCT  50

seq1  TGGAAAAGGAGTGAGGGTCAGTTTTTCTTAAGGGAATGGGCTCTGTTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAGGAGTGAGGGTCAGTTTTTCTTAAGGGAATGGGCTCTGTTAGG  100

seq1  TCAACCATGCTCAAGGGGATGCCCTCCCATGTTGAGCCTGATAGGTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCATGCTCAAGGGGATGCCCTCCCATGTTGAGCCTGATAGGTTATT  150

seq1  TTTAAAAAAAGAAACCAAGGACAGAAAGTTAGGGGAGTAAGAAAGTGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAAAGAAACCAAGGACAGAAAGTTAGGGGAGTAAGAAAGTGGGG  200

seq1  ATGAGTGTGGCAGGAGTCAAAGGGAGGAATGAGGAGTGAATATGATCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTGTGGCAGGAGTCAAAGGGAGGAATGAGGAGTGAATATGATCCAA  250

seq1  TTACATTGATAAAATTCTTCACAAATTAATAAAAGTATTATAATAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTGATAAAATTCTTCACAAATTAATAAAAGTATTATAATAAAAAA  300

seq1  ATCAAAATTCACTACTAGACACAAATGTGAATATATTTGCATTAAGCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATTCACTACTAGACACAAATGTGAATATATTTGCATTAAGCTCC  350

seq1  TAGGTTGAAGAACACCTAGCCTGCATATAAAACTGGGCTATTATGAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTGAAGAACACCTAGCCTGCATATAAAACTGGGCTATTATGAACAA  400

seq1  TAAAGAGAAATAAACTTGTGTATGTGTTTTTCTGTTGATTCAGACTTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGAAATAAACTTGTGTATGTGTTTTTCTGTTGATTCAGACTTTCA  450

seq1  GTTTATTCTAAGGAGTCAGGTAACTGGATGCTAAGGCACTTCTATTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTCTAAGGAGTCAGGTAACTGGATGCTAAGGCACTTCTATTCTTT  500

seq1  GTTTTTGACAAACCTCCTTATTGATGCTTCAGTGACTATACTGGTTCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGACAAACCTCCTTATTGATGCTTCAGTGACTATACTGGTTCACA  550

seq1  TTATCATTATCTGTGTATGAGTGATCAGTGTATCATTTACATTATTATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATTATCTGTGTATGAGTGATCAGTGTATCATTTACATTATTATGT  600

seq1  TAGTAGCCTTTTATTGTTTATTATAATTATTTTAATGTTAATGATTTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGCCTTTTATTGTTTATTATAATTATTTTAATGTTAATGATTTTAT  650

seq1  TGTTTCATTCATTTTATTAATTTATCTAGCTAATAATTATGATCCCTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCATTCATTTTATTAATTTATCTAGCTAATAATTATGATCCCTATT  700

seq1  TTGACATGGGTGGGAAGTAATCAACATAATTTTAATTTGCATTGCTTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATGGGTGGGAAGTAATCAACATAATTTTAATTTGCATTGCTTTGA  750

seq1  AGGATAACGATATTGAATATTTTTCATGTGCCTACTGATCATCCAAATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAACGATATTGAATATTTTTCATGTGCCTACTGATCATCCAAATAA  800

seq1  ATGTTTTGTTTTACTTTTTCTTTTTTTCTTTTTCTTTCTTTTTTTTCTTT  850
      ||||||||||||||         ||||||||||||||||| |||   |||
seq2  ATGTTTTGTTTTAC---------TTTTCTTTTTCTTTCTTCTTT---TTT  838

seq1  TCTTTTCTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTGAATTTTTGG  900
      |||||  || ||||||||     |||||||||||||||||| | ||||||
seq2  TCTTTCTTTCTTTTTTTC----CTTTTTTTTTTTTTTTTTGGA-TTTTGG  883

seq1  GAGAA-AATCATGCT-GTGTAGC-AGAAACTAGGTTCAAACTTGCTTTGT  947
      ||||| ||||||||| ||||||| |||||||| | || ||||||||||||
seq2  GAGAATAATCATGCTGGTGTAGCAAGAAACTAAGGTC-AACTTGCTTTGT  932

seq1  AGCTCA-CACT-GACCTGGAACTTCCAAGCTTGCCACAGCCTCCTCAGTG  995
      |||||| |||| |||||||||||||||||| |||||||||   ||||| |
seq2  AGCTCACCACTGGACCTGGAACTTCCAAGC-TGCCACAGCTCTCTCAGGG  981

seq1  CTAAGATTACAGGTAT-GTGTTATAGTCG-CTAGCAAATAATTGCCTTAT  1043
      || ||||||||||||| ||||||  |||| ||||||||||  ||||||| 
seq2  CT-AGATTACAGGTATGGTGTTAAGGTCGCCTAGCAAATA--TGCCTTA-  1027

seq1  TTTGTGGTCAAATATAGAATTT  1065
      ||||||| | ||||||||||||
seq2  TTTGTGGGCCAATATAGAATTT  1049