BAC Information

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BAC

Clone NameB6Ng01-144G24
ChromosomeX (Build37)
Map Location 124,912,081 - 125,052,385
singlet/doubletdoublet
Overlap genenone
Upstream gene4921511C20Rik, 4930412D23Rik, LOC385523, LOC100040516, Mdm4-ps, EG237030
Downstream geneLOC100040538, LOC100040550, LOC100040562, LOC100040570, LOC669120
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144G24.bB6Ng01-144G24.g
ACCDH942115DH942116
length1,024555
definitionDH942115|Mus musculus domesticus DNA, BAC clone: B6Ng01-144G24, 5' end.DH942116|Mus musculus domesticus DNA, BAC clone: B6Ng01-144G24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,051,311 - 125,052,385)(124,912,081 - 124,912,641)
sequence
gaattcttcatgttgacctctaaaattcaagtctctattagtgaaggaaa
gctgagagaaaaatagctcataaaaatcatttatatcataaaaaaagatg
attacaaaattcagcaaaatgccgaaatgtccgcattttatattaatgtc
atctcctcctactttccagggtgtctctactgctctcaagagactcatct
gtaagtaaggctacactgtgtctgcagagcaatctacaggatgctgacag
cctattgaggaaatcctccacagtgaatatttatgacacctctgattatt
tagaaatgtattaacttttaacttttattatgatactggaatataggctg
ggtaagcacatatggatggcatgaataggaacacactttttgtttatcat
gtcacttcacctagatataaaatgttctgtcttttttaggaacaatgcag
tagtagattattttttgaatctcaccagcagtgagtgtttctgtggaagg
gaaattatcatccaaatgactaaaactcccacagagttgatgtaagatat
ttgttctgcatttgacaggttaattataaagatgaggaggatcttagtac
ttcttgatttgtccaggtatttgacaaatacagaaccataattaaaacta
gaaatgtaatcaattaatgaccactaacagcaatcaagccagctaggaag
ttaagtgttgcatgtcacaaaattgcctctgtagattgatttttgaacac
tctttatgatagtcagtattcaagaatgtgctgaactataaacagccaaa
aacagaactcataaaggtccaaatgcaaactattcattcagaatgcttgg
ctaataaagaaaattgagtgtgcaaagaacttgaacataaggattgaaat
gagcctttaaaagtagcctagcgtataatcatttgtgactacgaggaaac
ctgatttgctcgtgttacataaagatattggaatatgagcatttggaagc
ttctttctttcttccttcctttct
tattgttagtttatctaggaattttccctttactttatgacaacacagta
tgacaagcttatagtttcctaattagaaatcatcagttttatcccttggt
ttttattccggctctgtttttacctttattttgagacaggggcttattaa
ggtacataggctgcccttgaacaaggtgactctgaacttgaaatccttct
gcctcagcattatttggttttatttctaaatattcagtgatttatctcca
tcagtctagcttctattgacagtgatctattctatgtcagaaattaaata
cagggaaacaatctcaagaggctagaaatatagctaagtattaagaaaaa
ttttacaaaagatgtcttgcccaaccatctaaaatatatcttggcatggg
gcttatagaagggatgggtgaagtgagttggtctttgccaatactatgca
aagttgagaataaagatagcactcatcttagtaacacaccagtttcttgt
ttggttggttggctatttagtttgattttgtatgtttgtgtgtgtgtgtg
tgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_125051311_125052385
seq2: B6Ng01-144G24.b_43_1066 (reverse)

seq1  AGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG  50
                                                      ||
seq2  ------------------------------------------------AG  2

seq1  GAAGGAAGGAAGGAAGGAAGGAAGCTTTCAAATGCTCATATTCCAATATC  100
       |||||||||| ||| ||| ||||||| ||||||||||||||||||||||
seq2  AAAGGAAGGAA-GAAAGAAAGAAGCTTCCAAATGCTCATATTCCAATATC  51

seq1  TTTATGGTAACACGAGCAAATCAGGTTTTCCTCGTAGTCACAAATGATTA  150
      ||||| ||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTTAT-GTAACACGAGCAAATCAGG-TTTCCTCGTAGTCACAAATGATTA  99

seq1  TACGCTAGGCTACTTTTTAAAGGCTCATTTCAATCCTTATGTTCAAGTTC  200
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TACGCTAGGCTAC-TTTTAAAGGCTCATTTCAATCCTTATGTTCAAGTTC  148

seq1  TTTGCACACTCAATTTTCTTTATTAGCCAAGCATTCTGAATGAATAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCACACTCAATTTTCTTTATTAGCCAAGCATTCTGAATGAATAGTTT  198

seq1  GCATTTGGACC-TTATGAGTTCTGTTTTTGGCTGTTTATAGTTCAGCACA  299
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGGACCTTTATGAGTTCTGTTTTTGGCTGTTTATAGTTCAGCACA  248

seq1  TTCTTGAATACTGACTATCATAAAGAGTGTTCAAAAATCAATCTACAGAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGAATACTGACTATCATAAAGAGTGTTCAAAAATCAATCTACAGAG  298

seq1  GCAATTTTGTGACATGCAACACTTAACTTCCTAGCTGGCTTGATTGCTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTTTGTGACATGCAACACTTAACTTCCTAGCTGGCTTGATTGCTGT  348

seq1  TAGTGGTCATTAATTGATTACATTTCTAGTTTTAATTATGGTTCTGTATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGTCATTAATTGATTACATTTCTAGTTTTAATTATGGTTCTGTATT  398

seq1  TGTCAAATACCTGGACAAATCAAGAAGTACTAAGATCCTCCTCATCTTTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAATACCTGGACAAATCAAGAAGTACTAAGATCCTCCTCATCTTTA  448

seq1  TAATTAACCTGTCAAATGCAGAACAAATATCTTACATCAACTCTGTGGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAACCTGTCAAATGCAGAACAAATATCTTACATCAACTCTGTGGGA  498

seq1  GTTTTAGTCATTTGGATGATAATTTCCCTTCCACAGAAACACTCACTGCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGTCATTTGGATGATAATTTCCCTTCCACAGAAACACTCACTGCT  548

seq1  GGTGAGATTCAAAAAATAATCTACTACTGCATTGTTCCTAAAAAAGACAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGATTCAAAAAATAATCTACTACTGCATTGTTCCTAAAAAAGACAG  598

seq1  AACATTTTATATCTAGGTGAAGTGACATGATAAACAAAAAGTGTGTTCCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTATATCTAGGTGAAGTGACATGATAAACAAAAAGTGTGTTCCT  648

seq1  ATTCATGCCATCCATATGTGCTTACCCAGCCTATATTCCAGTATCATAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGCCATCCATATGTGCTTACCCAGCCTATATTCCAGTATCATAAT  698

seq1  AAAAGTTAAAAGTTAATACATTTCTAAATAATCAGAGGTGTCATAAATAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTAAAAGTTAATACATTTCTAAATAATCAGAGGTGTCATAAATAT  748

seq1  TCACTGTGGAGGATTTCCTCAATAGGCTGTCAGCATCCTGTAGATTGCTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTGGAGGATTTCCTCAATAGGCTGTCAGCATCCTGTAGATTGCTC  798

seq1  TGCAGACACAGTGTAGCCTTACTTACAGATGAGTCTCTTGAGAGCAGTAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGACACAGTGTAGCCTTACTTACAGATGAGTCTCTTGAGAGCAGTAG  848

seq1  AGACACCCTGGAAAGTAGGAGGAGATGACATTAATATAAAATGCGGACAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCCTGGAAAGTAGGAGGAGATGACATTAATATAAAATGCGGACAT  898

seq1  TTCGGCATTTTGCTGAATTTTGTAATCATCTTTTTTTATGATATAAATGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGCATTTTGCTGAATTTTGTAATCATCTTTTTTTATGATATAAATGA  948

seq1  TTTTTATGAGCTATTTTTCTCTCAGCTTTCCTTCACTAATAGAGACTTGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATGAGCTATTTTTCTCTCAGCTTTCCTTCACTAATAGAGACTTGA  998

seq1  ATTTTAGAGGTCAACATGAAGAATTC  1075
      ||||||||||||||||||||||||||
seq2  ATTTTAGAGGTCAACATGAAGAATTC  1024

seq1: chrX_124912081_124912641
seq2: B6Ng01-144G24.g_66_626

seq1  GAATTCTATTGTTAGTTTATCTAGGAATTTTCCCTTTACTTTATGACAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTGTTAGTTTATCTAGGAATTTTCCCTTTACTTTATGACAAC  50

seq1  ACAGTATGACAAGCTTATAGTTTCCTAATTAGAAATCATCAGTTTTATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTATGACAAGCTTATAGTTTCCTAATTAGAAATCATCAGTTTTATCC  100

seq1  CTTGGTTTTTATTCCGGCTCTGTTTTTACCTTTATTTTGAGACAGGGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTTTTATTCCGGCTCTGTTTTTACCTTTATTTTGAGACAGGGGCT  150

seq1  TATTAAGGTACATAGGCTGCCCTTGAACAAGGTGACTCTGAACTTGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGGTACATAGGCTGCCCTTGAACAAGGTGACTCTGAACTTGAAAT  200

seq1  CCTTCTGCCTCAGCATTATTTGGTTTTATTTCTAAATATTCAGTGATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGCCTCAGCATTATTTGGTTTTATTTCTAAATATTCAGTGATTTA  250

seq1  TCTCCATCAGTCTAGCTTCTATTGACAGTGATCTATTCTATGTCAGAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATCAGTCTAGCTTCTATTGACAGTGATCTATTCTATGTCAGAAAT  300

seq1  TAAATACAGGGAAACAATCTCAAGAGGCTAGAAATATAGCTAAGTATTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACAGGGAAACAATCTCAAGAGGCTAGAAATATAGCTAAGTATTAA  350

seq1  GAAAAATTTTACAAAAGATGTCTTGCCCAACCATCTAAAATATATCTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTTTACAAAAGATGTCTTGCCCAACCATCTAAAATATATCTTGG  400

seq1  CATGGGGCTTATAGAAGGGATGGGTGAAGTGAGTTGGTCTTTGCCAATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGGCTTATAGAAGGGATGGGTGAAGTGAGTTGGTCTTTGCCAATAC  450

seq1  TATGCAAAGTTGAGAATAAAGATAGCACTCATCTTAGTAACACACCAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAAAGTTGAGAATAAAGATAGCACTCATCTTAGTAACACACCAGTT  500

seq1  TCTTGTTTGGTTGGTTGGCTATTTAGTTTGATTTTGTATGTTTGTGTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTTGGTTGGTTGGCTATTTAGTTTGATTTTGTATGTTTGTGTGTG  550

seq1  TGTGTGTGTGT  561
      |||||||||||
seq2  TGTGTGTGTGT  561