BAC Information

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BAC

Clone NameB6Ng01-145L15
ChromosomeX (Build37)
Map Location 105,816,846 - 105,914,520
singlet/doubletdoublet
Overlap geneGm379
Upstream geneTbx22, 2610002M06Rik, Gm732, Gm378, LOC668516
Downstream geneBrwd3, 5730416F02Rik, Nsbp1, Sh3bgrl, EG622976, LOC100042831, LOC213474
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145L15.bB6Ng01-145L15.g
ACCDH943052DH943053
length1,0951,061
definitionDH943052|Mus musculus domesticus DNA, BAC clone: B6Ng01-145L15, 5' end.DH943053|Mus musculus domesticus DNA, BAC clone: B6Ng01-145L15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(105,913,410 - 105,914,520)(105,816,846 - 105,817,916)
sequence
gaattcaccaaactaagaaataaatgagttataaataaggggagagtaag
tacaaggacatttctgtttgagagaatatctttggatacttggaataaca
gtaactggcctatcaggaatgaagatattttaaagagaaccttgtgtctc
tcctttttactactagactattgaaataacagattctaagaaatcggaac
ttaggagtctcatggtggaaaaaggaaaaggctgaaacctgatgccaacc
aaaggaaatgaaattttacacagccctgataacttgtcggaccaccttta
tcagagactggcacctaaacaatgagaccataccttggcctggaatgttt
agttatgcatactttttgtcctatatttaaacctaaatgacatatcaaga
ccccaaagacagacttgggggtagagatcactggacattttcatttgttt
gtttgtttgtttgtttacctaatgtgaccatattgaatatatccttttgc
tctgatttccctttacctgtccctttaattggcttcttgagtataggtag
tgaggcctagcttgttagggctggcaggtctcaactccaaccatcataac
cttagtaacataccttagtgttccttgtgtattgtgcctgctaaggtatt
aaaaaagtatagcataaagatgaggctagatagtaggaagaggccaggtg
ttgtagaacattgagtagtgaatttgaactttatctcctaaataatggtt
caattttatttaaggaaaaacggtggtacaggttttataactatcaaaaa
atgaaaaaaaaaaaaaacaaaaaaaacaacaacaccctgacaatgaaagc
agtgaagaggatatcagtatactataggtaaaaggggagcatgacttatc
tgtattagggtggcattgttgaagctgaagaaagcagatgaatcaggatt
tgtggacacagatgtagtgctttgttcatgtgaatatgtgatatgcagaa
gaaaaatagtcaagaaacatatctctaagaaaggttaagacgcagtatca
cgaatcgcatagagtagactattcagcatacaccagcttagacaa
gaattcccatgttcctaacatgtagctagctaccctcagtgagggctata
aaatggcattatatgaaggaataagctaggatgtatttcattgcaaatta
acctttgagatctcaatggctcaaaatacaatggcaaaattagtgtgtat
ttcagattttatggccatccttttcagcaacagtcttctaccatattcaa
agacctaggctaacagaggctgtaccatactatgaaaacattctctaacc
agaacagaagaaattttgatagaatcagaaaatgattcttaaggactttg
gcttggagtttacattcactgattattattggttataactagcatcatag
tctcacatgatttcatgtgggtttgaaaggaaacaaaaagatagttcatg
atcactaaatatgtacatggcaaacacctcaactctacatacaagagagt
ttcagagatgagaaataataattgtatcttttccacaaagcagggaagtg
taaaacatgtgcatgatattttttaagtttccttaaatctagagaaacct
ttatattaattagaaacacttttcagaacctctgtgttcaaaataattag
aaccagacaagtacctgtactgagaagaaaggcagcaaatgctggttaag
gttgttgccccacaggttaaagctagcttaggaaatgatcaaaggtcacc
aatggtttatttggtgaagaaaatgacgttggatgctgtctacagaataa
tgaacaactcttatggataatgattcttaagagtcaaagtcctttgagta
aatctctagaatttatgactagggtgaagcatgccctattccaacaagta
ctggagcagaaaggaaattttgaagaatttcttctagccaggaaaaatgt
cagaatgcactctcagtttccatactaaggtaagtcttgaagtataaaaa
atgtatccaaataaattattatattttatattgttttctgaatacatgca
tatgaatgtggggcattcatttgtatcacaatttctttcataatatttgc
tttcaggatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_105913410_105914520
seq2: B6Ng01-145L15.b_48_1142 (reverse)

seq1  TTGTCTTATAGCTGGGTGTATGCTGAATAAGTCTTACTCCTATGCGATTT  50
      ||||||   |||| |||||||||||||| |||| |||| |||||||| ||
seq2  TTGTCT--AAGCT-GGTGTATGCTGAAT-AGTC-TACT-CTATGCGA-TT  43

seq1  CGTGATACTTGCGTCTGTTACCTTTCTTTAGAGATTATTGTTTCTTGACC  100
      |||||||| ||||||| | ||||||| ||||||||   |||||||||| |
seq2  CGTGATAC-TGCGTCT-TAACCTTTC-TTAGAGAT--ATGTTTCTTGA-C  87

seq1  TATTTTTCTTCTGCATATTCACATATTTCACATTGAACAAAGCACTACAT  150
      ||||||||||||||||| ||||||| |||||| |||||||||||||||||
seq2  TATTTTTCTTCTGCATA-TCACATA-TTCACA-TGAACAAAGCACTACAT  134

seq1  CTGTGTCCACAAATTCTGATTCATCTGCTTTCTTCAGCTTCAACAATGCC  200
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTGTGTCCACAAATCCTGATTCATCTGCTTTCTTCAGCTTCAACAATGCC  184

seq1  ACCCTAATACAGATAAGTCATGCTCACCTTTTACCTATAGTATACTGATA  250
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACCCTAATACAGATAAGTCATGCTCCCCTTTTACCTATAGTATACTGATA  234

seq1  TCCTCTTCACTGCTTTCATTGTCAGGGTGTTGTTGTTTTTTTTGTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTCACTGCTTTCATTGTCAGGGTGTTGTTGTTTTTTTTGTTTTTT  284

seq1  TTTTTTTTCATTTTTTGATAGTTATAAAACCTGTACCACCGTTTTTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCATTTTTTGATAGTTATAAAACCTGTACCACCGTTTTTCCTT  334

seq1  AAATAAAATTGAACCATTATTTAGGAGATAAAGTTCAAATTCACTACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAATTGAACCATTATTTAGGAGATAAAGTTCAAATTCACTACTCA  384

seq1  ATGTTCTACAACACCTGGCCTCTTCCTACTATCTAGCCTCATCTTTATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTACAACACCTGGCCTCTTCCTACTATCTAGCCTCATCTTTATGC  434

seq1  TATACTTTTTTAATACCTTAGCAGGCACAATACACAAGGAACACTAAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTTTTTAATACCTTAGCAGGCACAATACACAAGGAACACTAAGGT  484

seq1  ATGTTACTAAGGTTATGATGGTTGGAGTTGAGACCTGCCAGCCCTAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTACTAAGGTTATGATGGTTGGAGTTGAGACCTGCCAGCCCTAACAA  534

seq1  GCTAGGCCTCACTACCTATACTCAAGAAGCCAATTAAAGGGACAGGTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGCCTCACTACCTATACTCAAGAAGCCAATTAAAGGGACAGGTAAA  584

seq1  GGGAAATCAGAGCAAAAGGATATATTCAATATGGTCACATTAGGTAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATCAGAGCAAAAGGATATATTCAATATGGTCACATTAGGTAAACA  634

seq1  AACAAACAAACAAACAAATGAAAATGTCCAGTGATCTCTACCCCCAAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAACAAACAAATGAAAATGTCCAGTGATCTCTACCCCCAAGTC  684

seq1  TGTCTTTGGGGTCTTGATATGTCATTTAGGTTTAAATATAGGACAAAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTGGGGTCTTGATATGTCATTTAGGTTTAAATATAGGACAAAAAG  734

seq1  TATGCATAACTAAACATTCCAGGCCAAGGTATGGTCTCATTGTTTAGGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATAACTAAACATTCCAGGCCAAGGTATGGTCTCATTGTTTAGGTG  784

seq1  CCAGTCTCTGATAAAGGTGGTCCGACAAGTTATCAGGGCTGTGTAAAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTCTGATAAAGGTGGTCCGACAAGTTATCAGGGCTGTGTAAAATT  834

seq1  TCATTTCCTTTGGTTGGCATCAGGTTTCAGCCTTTTCCTTTTTCCACCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCCTTTGGTTGGCATCAGGTTTCAGCCTTTTCCTTTTTCCACCAT  884

seq1  GAGACTCCTAAGTTCCGATTTCTTAGAATCTGTTATTTCAATAGTCTAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTCCTAAGTTCCGATTTCTTAGAATCTGTTATTTCAATAGTCTAGT  934

seq1  AGTAAAAAGGAGAGACACAAGGTTCTCTTTAAAATATCTTCATTCCTGAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAAAGGAGAGACACAAGGTTCTCTTTAAAATATCTTCATTCCTGAT  984

seq1  AGGCCAGTTACTGTTATTCCAAGTATCCAAAGATATTCTCTCAAACAGAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGTTACTGTTATTCCAAGTATCCAAAGATATTCTCTCAAACAGAA  1034

seq1  ATGTCCTTGTACTTACTCTCCCCTTATTTATAACTCATTTATTTCTTAGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTTGTACTTACTCTCCCCTTATTTATAACTCATTTATTTCTTAGT  1084

seq1  TTGGTGAATTC  1111
      |||||||||||
seq2  TTGGTGAATTC  1095

seq1: chrX_105816846_105817916
seq2: B6Ng01-145L15.g_67_1127

seq1  GAATTCCCATGTTCCTAACATGTAGCTAGCTACCCTCAGTGAGGGCTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATGTTCCTAACATGTAGCTAGCTACCCTCAGTGAGGGCTATA  50

seq1  AAATGGCATTATATGAAGGAATAAGCTAGGATGTATTTCATTGCAAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCATTATATGAAGGAATAAGCTAGGATGTATTTCATTGCAAATTA  100

seq1  ACCTTTGAGATCTCAATGGCTCAAAATACAATGGCAAAATTAGTGTGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTGAGATCTCAATGGCTCAAAATACAATGGCAAAATTAGTGTGTAT  150

seq1  TTCAGATTTTATGGCCATCCTTTTCAGCAACAGTCTTCTACCATATTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATTTTATGGCCATCCTTTTCAGCAACAGTCTTCTACCATATTCAA  200

seq1  AGACCTAGGCTAACAGAGGCTGTACCATACTATGAAAACATTCTCTAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTAGGCTAACAGAGGCTGTACCATACTATGAAAACATTCTCTAACC  250

seq1  AGAACAGAAGAAATTTTGATAGAATCAGAAAATGATTCTTAAGGACTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGAAGAAATTTTGATAGAATCAGAAAATGATTCTTAAGGACTTTG  300

seq1  GCTTGGAGTTTACATTCACTGATTATTATTGGTTATAACTAGCATCATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGAGTTTACATTCACTGATTATTATTGGTTATAACTAGCATCATAG  350

seq1  TCTCACATGATTTCATGTGGGTTTGAAAGGAAACAAAAAGATAGTTCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACATGATTTCATGTGGGTTTGAAAGGAAACAAAAAGATAGTTCATG  400

seq1  ATCACTAAATATGTACATGGCAAACACCTCAACTCTACATACAAGAGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTAAATATGTACATGGCAAACACCTCAACTCTACATACAAGAGAGT  450

seq1  TTCAGAGATGAGAAATAATAATTGTATCTTTTCCACAAAGCAGGGAAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGATGAGAAATAATAATTGTATCTTTTCCACAAAGCAGGGAAGTG  500

seq1  TAAAACATGTGCATGATATTTTTTAAGTTTCCTTAAATCTAGAGAAACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACATGTGCATGATATTTTTTAAGTTTCCTTAAATCTAGAGAAACCT  550

seq1  TTATATTAATTAGAAACACTTTTCAGAACCTCTGTGTTCAAAATAATTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTAATTAGAAACACTTTTCAGAACCTCTGTGTTCAAAATAATTAG  600

seq1  AACCAGACAAGTACCTGTACTGAGAAGAAAGGCAGCAAATGCTGGTTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGACAAGTACCTGTACTGAGAAGAAAGGCAGCAAATGCTGGTTAAG  650

seq1  GTTGTTGCCCCACAGGTTAAAGCTAGCTTAGGAAATGATCAAAGGTCACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGCCCCACAGGTTAAAGCTAGCTTAGGAAATGATCAAAGGTCACC  700

seq1  AATGGTTTATTTGGTGAAGAAAATGACGTTGGATGCTGTCTACAGAATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTTATTTGGTGAAGAAAATGACGTTGGATGCTGTCTACAGAATAA  750

seq1  TGAACAACTCTTATGGATAATGATTCTTAAGAGTCAAAGTCCTTTGAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAACTCTTATGGATAATGATTCTTAAGAGTCAAAGTCCTTTGAGTA  800

seq1  AATCTCTAGAATTTATGACTAGGGTGAAGCATGCCCTATTCCAACAAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AATCTCTAGAATTTATGACTAGGGTGAAGCATGCCCTATTCCAAC-AAGT  849

seq1  ACTGGAGCAGAAAGGAAATTTTGAAGAATTTCTTCTAGCCAGGAAAAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGCAGAAAGGAAATTTTGAAGAATTTCTTCTAGCCAGGAAAAATG  899

seq1  TCAGAATGCACTCTCAGTTTCCATACTAAGGTAAGTCTTGAAGTATAAAA  950
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCAGAATGCACTCTCAGTTTCCATACTAAGGTAAGTCTTGAAGTAT-AAA  948

seq1  AAATGTATCCAAATAAATTATTATATTTTATAATTGTTTTTCTGAATAAC  1000
      ||||||||||||||||||||||||||||||| |||| |||||||||||  
seq2  AAATGTATCCAAATAAATTATTATATTTTAT-ATTG-TTTTCTGAATA--  994

seq1  AATGCATATGAATGT-GTGCATTCATTTGTTAATTCAACAAATATCTTTC  1049
       |||||||||||||| | ||||||||||||    |||   ||| ||||||
seq2  CATGCATATGAATGTGGGGCATTCATTTGT---ATCA--CAATTTCTTTC  1039

seq1  ATAATATTGCCTTTCAGGATCT  1071
      ||||||||  ||||||||||||
seq2  ATAATATTTGCTTTCAGGATCT  1061