BAC Information

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BAC

Clone NameB6Ng01-145O08
ChromosomeX (Build37)
Map Location 94,169,581 - 94,315,691
singlet/doubletdoublet
Overlap geneLOC668238, Pgr15l
Upstream geneMsn, Psmb7-ps1, LOC668221, Vsig4, B230358A15Rik, Heph, Gpr165, LOC675824, LOC668234, EG668236
Downstream geneEda2r, LOC668244
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145O08.bB6Ng01-145O08.g
ACCDH943178DH943179
length8261,143
definitionDH943178|Mus musculus domesticus DNA, BAC clone: B6Ng01-145O08, 5' end.DH943179|Mus musculus domesticus DNA, BAC clone: B6Ng01-145O08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,169,581 - 94,170,159)(94,315,064 - 94,315,691)
sequence
gaattcagtaaaaaagtactgaaaaactatcaagtaactttttagaattc
taattttagttggatttgcaaatgtttatctctgcagaagaatgatattt
attgttctcctacaaatgatagactcattttattcattttctgtgaaaat
acctgagcaatcataatttggcagctgttatttcaagttatcatgttatt
tactcaataaaggaactacttcatttgttaagtcaaacaagttctttcct
ggagacaataattttactttcacattcagcagatgtactttatgaatatt
tcatcctttgtcacacataatgtgaaaaaatgtttgtttaagggttataa
tttaatatgttttcagatttattcataaatttattttaatttatttttaa
ttgaaatgaaattgtatcacttcttcttctcaggtacattctttccaaac
tagtgcatgccccacccaactctcaaattgatagcttttctgtctgatag
gtataattacatatgaatatgcatatgaatgtacaagtagataaacataa
cctgcaagtctgtttttgttgtttgtgtatataggtttttcagcccaatc
attttgagtataaccaataagggggcttatacccaggatatggtaatttc
cttatcctagcagctattagttacctatagaatttctgtctatagatagg
actacatgaagtttcccttttccctattaatatgttcactgataataaca
agagcatttaaggtaacatgtatttatggttttcttgtgagtggagtatg
attttatatatatatatgtgtgtgtg
gaattcaatgaccaccaggacttcatatggtacacatatgtattttgcaa
atagccatgcatttaaaatatttttaaaatatttaataaatattttttta
attttttaaaatttattttaaaaaatataatattttaagattccccccct
ttgagaatcttatatacgagtacagcaattacatcaactgcttcattttc
ttgcttttacttcctccaatttccctctgtgatagccattcttggttgtc
aacctgagtacgtctagaacgacatttaagcctttagatacgcttgtgag
ggattgtgattggaccagttgaagtgtgaagaccttaaatctgggccgta
tcttctggtggcagctcatataaaggacatggaaggataaagctctttgc
tctttgtgttcttgcccatgctctcactgtcaagttcattttttcactgg
tattagatcatacttcttcagaattcagggatatactatatattaaaaac
tagctgatatattccttttataccaaacaactactggattcttggacttt
tcatcaggaattcaagagacagccattgttggaagagtcagaccatatcc
tataagttacactaataaatccagtaatgcatataacaaacatacataca
tatacacacatgcatatatgtacacacatatacatataaacatacagaca
caatgcacatgtgcatttatgcacaaacacacacagacacatatttctgt
acagaaccctaactaatatacccttccataatcctcacatccatgatgtt
gtattctttaattattagtaatatatattttatctatttatttatcagtg
acctgttgagctcacttaatgttactcatatgtgtatttgcttgggggtg
actattgggattgattatatacagtgacatgttcctggagaagactgatt
cttcttatccctgaacaacagtaattagcaggtttctttctgagtgttgt
gttacatgaatgtcacaataatatttaaaagagaagatacaatagtttag
cagtggaatagtgaaccaaaaggaatttgaggaggaaagggaataggtta
cccacatatgaaattctcattcgaaagcttttattatattttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_94169581_94170159
seq2: B6Ng01-145O08.b_295_873

seq1  CCTGGAGACAATAATTTTACTTTCACATTCAGCAGATGTACTTTATGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGACAATAATTTTACTTTCACATTCAGCAGATGTACTTTATGAAT  50

seq1  ATTTCATCCTTTGTCACACATAATGTGAAAAAATGTTTGTTTAAGGGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATCCTTTGTCACACATAATGTGAAAAAATGTTTGTTTAAGGGTTA  100

seq1  TAATTTAATATGTTTTCAGATTTATTCATAAATTTATTTTAATTTATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAATATGTTTTCAGATTTATTCATAAATTTATTTTAATTTATTTT  150

seq1  TAATTGAAATGAAATTGTATCACTTCTTCTTCTCAGGTACATTCTTTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAAATGAAATTGTATCACTTCTTCTTCTCAGGTACATTCTTTCCA  200

seq1  AACTAGTGCATGCCCCACCCAACTCTCAAATTGATAGCTTTTCTGTCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGTGCATGCCCCACCCAACTCTCAAATTGATAGCTTTTCTGTCTGA  250

seq1  TAGGTATAATTACATATGAATATGCATATGAATGTACAAGTAGATAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATAATTACATATGAATATGCATATGAATGTACAAGTAGATAAACA  300

seq1  TAACCTGCAAGTCTGTTTTTGTTGTTTGTGTATATAGGTTTTTCAGCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTGCAAGTCTGTTTTTGTTGTTTGTGTATATAGGTTTTTCAGCCCA  350

seq1  ATCATTTTGAGTATAACCAATAAGGGGGCTTATACCCAGGATATGGTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTGAGTATAACCAATAAGGGGGCTTATACCCAGGATATGGTAAT  400

seq1  TTCCTTATCCTAGCAGCTATTAGTTACCTATAGAATTTCTGTCTATAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTATCCTAGCAGCTATTAGTTACCTATAGAATTTCTGTCTATAGAT  450

seq1  AGGACTACATGAAGTTTCCCTTTTCCCTATTAATATGTTCACTGATAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTACATGAAGTTTCCCTTTTCCCTATTAATATGTTCACTGATAATA  500

seq1  ACAAGAGCATTTAAGGTAACATGTATTTATGGTTTTCTTGTGAGTGGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGCATTTAAGGTAACATGTATTTATGGTTTTCTTGTGAGTGGAGT  550

seq1  ATGATTTTATATATATATATGTGTGTGTG  579
      |||||||||||||||||||||||||||||
seq2  ATGATTTTATATATATATATGTGTGTGTG  579

seq1: chrX_94315064_94315691
seq2: B6Ng01-145O08.g_592_1210 (reverse)

seq1  AAAATA-AATAAAAGCATTACGAATTAAGAATTTCATATGTGTGTATACC  49
      |||||| ||||||||| || |||| | ||||||||||||||| ||| |||
seq2  AAAATATAATAAAAGC-TTTCGAA-TGAGAATTTCATATGTGGGTA-ACC  47

seq1  TA-TCCCTTTCCTTCCTCCAATTCCTTTTGTGTTCACTATT-CACTGCTA  97
      || ||||||||| ||||| ||||||||||| |||||||||| ||||||||
seq2  TATTCCCTTTCC-TCCTCAAATTCCTTTTG-GTTCACTATTCCACTGCTA  95

seq1  AACTATTGGTATCTTCTCTTTTAAATATTATTGTGACATTCATGTAAACA  147
      ||||||| ||||||||||||||||||||||||||||||||||||| ||||
seq2  AACTATT-GTATCTTCTCTTTTAAATATTATTGTGACATTCATGT-AACA  143

seq1  CACACACTCAGAGAGAAAACCTGCTGATTTACTGTTGTTCAGGGATATGA  197
      || ||||||||| || ||||||||| | ||||||||||||||||||| ||
seq2  CA-ACACTCAGAAAG-AAACCTGCT-AATTACTGTTGTTCAGGGATAAGA  190

seq1  AGAATCAGTCTTCTCCAGGAACATGTCACTGTTATACTATTCAATCCCAA  247
      ||||||||||||||||||||||||||||||| |||| || ||||||||||
seq2  AGAATCAGTCTTCTCCAGGAACATGTCACTG-TATA-TAATCAATCCCAA  238

seq1  TAGTCACCCCCAAGCACATACACATATGAGTAACATTAAGTGAGCTCAAC  297
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TAGTCACCCCCAAGCAAATACACATATGAGTAACATTAAGTGAGCTCAAC  288

seq1  AGGTCACTGATAAATAAATAGATAAAATATATATTACTAATAATTAAAGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCACTGATAAATAAATAGATAAAATATATATTACTAATAATTAAAGA  338

seq1  ATACAACATCATGGATGTGAGGATTATGGAAGGGTATATTAGTTAGGGTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACATCATGGATGTGAGGATTATGGAAGGGTATATTAGTTAGGGTT  388

seq1  CTGTACAGAAATATGTGTCTGTGTGTGTTTGTGCATAAATGCACATGTGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACAGAAATATGTGTCTGTGTGTGTTTGTGCATAAATGCACATGTGC  438

seq1  ATTGTGTCTGTATGTTTATATGTATATGTGTGTACATATATGCATGTGTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTCTGTATGTTTATATGTATATGTGTGTACATATATGCATGTGTG  488

seq1  TATATGTATGTATGTTTGTTATATGCATTACTGGATTTATTAGTGTAACT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTATGTATGTTTGTTATATGCATTACTGGATTTATTAGTGTAACT  538

seq1  TATAGGATATGGTCTGACTCTTCCAACAATGGCTGTCTCTTGAATTCCTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGATATGGTCTGACTCTTCCAACAATGGCTGTCTCTTGAATTCCTG  588

seq1  ATGAAAAGTCCAAGAATCCAGTAGTTGTTTG  628
      |||||||||||||||||||||||||||||||
seq2  ATGAAAAGTCCAAGAATCCAGTAGTTGTTTG  619