BAC Information

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BAC

Clone NameB6Ng01-150G19
ChromosomeX (Build37)
Map Location 122,157,437 - 122,186,963
singlet/doubletdoublet
Overlap geneLOC100038978
Upstream geneLOC100038940, LOC100038941, EG625699, LOC100038942, LOC100039828, EG434843, EG665463, EG665522, LOC100038969
Downstream geneEG665579, EG665611, EG626048, LOC100040410, LOC100039903
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150G19.bB6Ng01-150G19.g
ACCDH946507DH946508
length1,1061,018
definitionDH946507|Mus musculus domesticus DNA, BAC clone: B6Ng01-150G19, 5' end.DH946508|Mus musculus domesticus DNA, BAC clone: B6Ng01-150G19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,157,437 - 122,158,164)(122,185,946 - 122,186,963)
sequence
gaattccaggagatctttaaattctttatttcttccctgaccaagtttta
atagagtagagagttgttcaatttccatgtatgtgtgggctttctgtttt
gttgttattgaagaccagccttagtccatgatgatctgataggatgcata
ggattattatcaacctttggaatttgttgaggcttgtttttagccctaga
atatggtcaattttgcagaaggtaccatgaggtgcagagaagtgcattct
tttgttttagggtgaaatgttcagtaggcatctgttaaatccatttgttt
cataacctcttttagtttcactgtgtcttctgtttagattctggttcaat
gacctgtccattagtgacagtggggtgttgaagtctcccactgttggggc
cggcttgcggctctcatgtctgggttcgagcctgggatgcattttgaaac
tgaaagaaaagagggaatctaggagggtaaagaatgaaatggagtcaaga
ctgaattctgatcaagactcaactttaatgtaggcaaacacgctttataa
agaagaggggaggcccattcccagccacaaaagtttcctttgaagttgtc
agatcagccttttattaagaacccaggaaaatcacagttccttgttaact
ctggaagatcttggagaagtgattcagcctcaggcaggtggcaggtagtg
gcatatcaaaggagagggatgagaagcaacacagcaggtggatctgcctc
aggggcagatggtctcagccagtcttgctaggctggaaggaggtaatatt
ccccccctttaaataatattaaataaaactggactgaggcataaaattta
tttatactctgaagtcctgccttggaattatggtggctggcagctctgcc
tgtcttgggatctcagatcctcccgaaccatccaattccgtcttaggggc
tacatgcaattggatgtgtaataattaacacaaacatggctctgtggtgt
cttatcaacaaccacggccttttggcatgtacccctgtcttagaatggga
tgattacctggatctggttaccctcactgactgtcaggctccatcgccaa
ccatat
gaattccttacatcctctcctacagatacagaatgtcccagtgtccccaa
gggctgcatggagggttgtatggtctcatcacactgtacaaatatggagc
ttgtttggctccctgggagcattttggcagaatcttggctgtttgggacc
tgatgactagtcaggagggcccttttggctggtaggggatatttgaataa
ttcttgatcagatcgggactttctggagacccgttgtttagagagagcat
ctttcaatcctctgctagaatgagaatgttcagggtcacttttcataaaa
ggagaatgatttaatcttcctttctgttggagagcagatttaagaacatg
tctttgatgctcttccatagagggagataatcctagtggccacctaacag
atggagaaggtctcagaacccctggggaagatgctgatggttctagttca
ctttgtgtatgtgcagaaggcacaagagtccctttggaggactcaggagt
ttctatcacacctagcctatgtgtggaactctcaagagccccttctaagg
atggcaaaggtccttgagctcctggtataggtgtggaaaattttgtctct
gcttgggcatgtatgagcggtgtgaggctcactttgggaatcgtgattgc
atttctttccctttggactgtaagagatgatctgagcccattttttaatg
gtagaggactttgaaagccctcttggtttaaaggggaagttctgaaatcc
tcttggtcagcagggtcaggtctcaaactcactttactagaagcagattg
catggggcactttgggggagaaaggggaacgtctttggctgtctttgtga
gaggacttagctttatgccctgctttgggcagctgtcaaacatgttgaac
tctcctggggagaggaggtggaagtcgatacatttgagacaaagagaaat
cagtgatgttacttttgggagaaggaggtttggatccctcctggcctgat
ggggcctgtgtagggccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_122157437_122158164
seq2: B6Ng01-150G19.b_424_1149

seq1  AAGTCTCCCACTGTTGGGGCGGGTTTGTGGCTCTCATGTCTGGGTTCGAG  50
      |||||||||||||||||||| || ||| ||||||||||||||||||||||
seq2  AAGTCTCCCACTGTTGGGGCCGGCTTGCGGCTCTCATGTCTGGGTTCGAG  50

seq1  CCTGGGATGCATTTTGAAACTGAAAGAAAAGAGGGAATCTAGGCGGGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCTGGGATGCATTTTGAAACTGAAAGAAAAGAGGGAATCTAGGAGGGTAA  100

seq1  ACAATGAAATGGAGTCAAGACTGAATTCTGATCAAGACTCAACTTTAATG  150
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAAATGGAGTCAAGACTGAATTCTGATCAAGACTCAACTTTAATG  150

seq1  TAGGCAAACATGCTTTATAAAGAAGAGGGGAGGCCCATTTCCAGTCACAC  200
      |||||||||| |||||||||||||||||||||||||||| |||| |||| 
seq2  TAGGCAAACACGCTTTATAAAGAAGAGGGGAGGCCCATTCCCAGCCACAA  200

seq1  AAAGTTCCTTTGAAGTTGTCAGATCAGCCTTTTAGTAGGATCCCAGGAAA  250
      ||  |||||||||||||||||||||||||||||| || || |||||||||
seq2  AAGTTTCCTTTGAAGTTGTCAGATCAGCCTTTTATTAAGAACCCAGGAAA  250

seq1  ATCACAGTTCCTTGTTAACTCTGGAAGATCTTGGAGAACTGATTCAGCCT  300
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATCACAGTTCCTTGTTAACTCTGGAAGATCTTGGAGAAGTGATTCAGCCT  300

seq1  CAGGCAGGTGGCAGATAGTAGCATATCAAAGGAGAGGGATGAGAAGCCAC  350
      |||||||||||||| |||| ||||||||||||||||||||||||||| ||
seq2  CAGGCAGGTGGCAGGTAGTGGCATATCAAAGGAGAGGGATGAGAAGCAAC  350

seq1  ACAGCAGGTGGCTCTGCCTCAGGGGCAGATGGTCACAGCCAGCCTTGCTA  400
      ||||||||||| |||||||||||||||||||||| ||||||| |||||||
seq2  ACAGCAGGTGGATCTGCCTCAGGGGCAGATGGTCTCAGCCAGTCTTGCTA  400

seq1  GGCTGGAAGGAGGTAATA-TCCCCCCCTTTAAATAATATTAAATAAAACT  449
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGCTGGAAGGAGGTAATATTCCCCCCCTTTAAATAATATTAAATAAAACT  450

seq1  GGACTGAGGCATAAAATTTATTTATGCTCTAAAGTCCTGCCTTGGAATTA  499
      ||||||||||||||||||||||||| |||| |||||||||||||||||||
seq2  GGACTGAGGCATAAAATTTATTTATACTCTGAAGTCCTGCCTTGGAATTA  500

seq1  TGGTGGCTGGCAGCTCTGCCTGTCTTGGGATCTCAGATCCTCCCGAACCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCTGGCAGCTCTGCCTGTCTTGGGATCTCAGATCCTCCCGAACCA  550

seq1  TCCAATTTCATCATAGTGGACTACATGCAGCTAGGATGTGTAATAATTTA  599
      ||||||| | || ||| || |||||||||  | ||||||||||||||| |
seq2  TCCAATTCCGTCTTAG-GGGCTACATGCA-ATTGGATGTGTAATAATTAA  598

seq1  CACAAACATGGCTCTGTGGTGTTTTATCAACAACCACGGCCTTTTGGCAT  649
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CACAAACATGGCTCTGTGGTGTCTTATCAACAACCACGGCCTTTTGGCAT  648

seq1  GTACCCCTGTCTTAGACTGGTATGACT-CCGTGATCTGGTTGCCCTTCAC  698
      |||||||||||||||| ||| |||| | ||  ||||||||| ||| ||||
seq2  GTACCCCTGTCTTAGAATGGGATGATTACCTGGATCTGGTTACCC-TCAC  697

seq1  TGACTGTCAGGCCCACATCGCACACCATAT  728
      |||||||||||| | ||||||  |||||||
seq2  TGACTGTCAGGCTC-CATCGCCAACCATAT  726

seq1: chrX_122185946_122186963
seq2: B6Ng01-150G19.g_65_1082 (reverse)

seq1  GGGACCTACAACAGGCCCCATCAGACAAGGAGGGATCCAAACCTCCTTCT  50
      ||| ||||| |||||||||||||| | |||||||||||||||||||||||
seq2  GGGCCCTAC-ACAGGCCCCATCAGGCCAGGAGGGATCCAAACCTCCTTCT  49

seq1  CCCAAAGGTAACATCACTGATTTCTCCTTTGTCTCAAATGTATCGACTTC  100
      |||||| |||||||||||||||||| ||||||||||||||||||||||||
seq2  CCCAAAAGTAACATCACTGATTTCT-CTTTGTCTCAAATGTATCGACTTC  98

seq1  CACCTCCTCTCCCCAGGAGAGTTCAACATGTTTGACAGCTG-CCAAAGCA  149
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CACCTCCTCTCCCCAGGAGAGTTCAACATGTTTGACAGCTGCCCAAAGCA  148

seq1  GGGCATAAAGCTAAGTCCTCTCACAAAGACAGCCAAAGACGTTCCCC-TT  198
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGGCATAAAGCTAAGTCCTCTCACAAAGACAGCCAAAGACGTTCCCCTTT  198

seq1  CTCCCCCAAAGTGCCCCATGCAATCTGCTTCTAGTAAAGTGAGTTTGAGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCAAAGTGCCCCATGCAATCTGCTTCTAGTAAAGTGAGTTTGAGA  248

seq1  CCTGACCCTGCTGACCAAGGGGATTTCAGAACTTCCCCTTTAAACCAAGA  298
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCTGACCCTGCTGACCAAGAGGATTTCAGAACTTCCCCTTTAAACCAAGA  298

seq1  GGGCTTTCAAAGTCCTCTACCATTAAAAAATGGGCTCAGATCATCTCTTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTTCAAAGTCCTCTACCATTAAAAAATGGGCTCAGATCATCTCTTA  348

seq1  CAGTCCTAAGGGAAAGAAATGCAATCACGATTCCCAAAGTGAGCCTCACA  398
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCAAAGGGAAAGAAATGCAATCACGATTCCCAAAGTGAGCCTCACA  398

seq1  CCGCTCATACCTGCCCAAGCAGAGACAAAATTTTCCACACCTATACCAGG  448
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCGCTCATACATGCCCAAGCAGAGACAAAATTTTCCACACCTATACCAGG  448

seq1  AGCTCAAGGACCTTTGCCATCCTTAGAAGGGGCTCTTGAGAGTTCCACAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAAGGACCTTTGCCATCCTTAGAAGGGGCTCTTGAGAGTTCCACAC  498

seq1  ATAGGCTAGGTGTGATAGAAACTCCTGAGTCCTCCAAAGGGACTCTTGTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCTAGGTGTGATAGAAACTCCTGAGTCCTCCAAAGGGACTCTTGTG  548

seq1  CCTTCTGCACATACACAAAGTGAACTAGAACCATCAGCATCTTCCCCAGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGCACATACACAAAGTGAACTAGAACCATCAGCATCTTCCCCAGG  598

seq1  GGTTCTGAGACCTTCTCCATCTGTTAGGTGGCCACTAGGATTATCTCCCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTGAGACCTTCTCCATCTGTTAGGTGGCCACTAGGATTATCTCCCT  648

seq1  CTATGGAAGAGCATCAAAGACATGTTCTTAAATCTGCTCTCCCACAGAAA  698
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTATGGAAGAGCATCAAAGACATGTTCTTAAATCTGCTCTCCAACAGAAA  698

seq1  GGAAGATTAAATCATTCTCCTGTTATGAAAAGTGACCCTGAACATTCTCA  748
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGAAGATTAAATCATTCTCCTTTTATGAAAAGTGACCCTGAACATTCTCA  748

seq1  TTCTAGCAGAGGATTGAAAGATGCTCTCTCTAAACAACGGGTCTCCAGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGCAGAGGATTGAAAGATGCTCTCTCTAAACAACGGGTCTCCAGAA  798

seq1  AGTCCCGATCTGATCAAGAATTATTCAAATATCCCCTACCAGCCAAAAGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCGATCTGATCAAGAATTATTCAAATATCCCCTACCAGCCAAAAGG  848

seq1  GCCCTCCTGACTTGTCATCAGGTCCCAAACAGCCAAGATTCTGCCAAAAT  898
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GCCCTCCTGACTAGTCATCAGGTCCCAAACAGCCAAGATTCTGCCAAAAT  898

seq1  GCTCCCAGGGAGCCAAACAAGCTCCATATTTGTACAGTGTGATGAGACCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCAGGGAGCCAAACAAGCTCCATATTTGTACAGTGTGATGAGACCA  948

seq1  TACAACCCTCCATGCAGCCCTTGGGGACACTGGGACATTCTGTATCTGTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCCTCCATGCAGCCCTTGGGGACACTGGGACATTCTGTATCTGTA  998

seq1  GGAGAGGATGTAAAGAATTC  1018
      ||||||||||||| ||||||
seq2  GGAGAGGATGTAAGGAATTC  1018