BAC Information

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BAC

Clone NameB6Ng01-150I24
ChromosomeX (Build37)
Map Location 93,209,896 - 93,388,703
singlet/doubletdoublet
Overlap geneMsn, Psmb7-ps1
Upstream gene9630042H07Rik, Arhgef9, LOC619688, LOC100042189, 2810002O09Rik, Asb12, LOC668202, AK129302, A130028J20Rik, 1700010D01Rik, Las1l
Downstream geneLOC668221, Vsig4, B230358A15Rik, Heph, Gpr165, LOC675824, LOC668234, EG668236, LOC668238, Pgr15l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150I24.bB6Ng01-150I24.g
ACCDH946611DH946612
length2911,035
definitionDH946611|Mus musculus domesticus DNA, BAC clone: B6Ng01-150I24, 5' end.DH946612|Mus musculus domesticus DNA, BAC clone: B6Ng01-150I24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,388,413 - 93,388,703)(93,209,896 - 93,210,910)
sequence
aagaaacattcccattcataatagccttaaaaaacaaaataccaaggatt
aatcctagcaaaagaagacactaaagatggaaagatctcctatcaaaggt
aatttacaggaacattggaatcccaatcaaaatccatatgaaaacctaca
gggagagagagagagagagagagagagagagagagagggagagagagaga
gagagagagagggagagagagaggagagagagagagaggagagagagagg
agagagtgagagattatggaaccgaaaaaattttgtgcatc
gaattcctctgttgagaattctctgtttagctctgtacccattttttttt
taatttattcgttattttgtttatttacatttcaaatgttatcccccttt
ctggttttctcttcgaaaactccccatcccacacccttcctcctgcctcc
cggaggatgctctcttacccacccactcactcttgccccaccgccctagc
attcccctatgctcagaactcattttttaattggattatttggtttggtg
ttgtcttaatttcttgggttccttatatattttggatgtcagccgtctgt
ctgatgtagggttggtgactattttcccaatctgtaggctgctgttttgt
cctattaacagtgtcctttgtcttgcagaagcttctcagtttcatgaggt
cccatttattaattcttgaccttagtgcctgagccattggtattctgttc
aggaagttgtctcctataccaacaagttcaagactatcccccactttctg
ttctataagacatttaaataaaatatttcttggtgccagcaagatggctt
agtgggtgggagaacttacctccaaacctgaacacgtgagactgttccct
ggagcctacatggtgaaaggagagaatctactcacacaggttttcccctg
acttactccatacatgtgcataaccccaaacaaacaaataaatgtaagag
catatcctgtgaagtctttatttcctgggttgtctgtgaattttctagaa
aagatttgtcatcagcataggggtgctgcaataaactaatgaccagtcca
atcatttcatagagtgaaaagtttgctaacttcattgtatcttttcttca
caataaactattatcagtcagacacctttaacagaggaaaaaagactgtt
tatgctgggaatggtttggggaaaaaatgggcttgggcgttgaggactag
agaatctgactttctccttgagcatgctggtagaaaacctggggtctttt
cagacattaagtggtcttagagggagaaggttttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_93388413_93388703
seq2: B6Ng01-150I24.b_54_344 (reverse)

seq1  GATGCACAAAATTTTTTCGGTTCCATAATCTCTCTCTCTCTCCTCTCTCT  50
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GATGCACAAAATTTTTTCGGTTCCATAATCTCTCACTCTCTCCTCTCTCT  50

seq1  CTCCTCTCTCTCTCTCTCCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTCTCTCTCTCTCCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCT  100

seq1  CTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTGTAGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTGTAGGTTT  150

seq1  TCATATGGATTTTGATTGGGATTCCAATGTTCCTGTAAATTACCTTTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATGGATTTTGATTGGGATTCCAATGTTCCTGTAAATTACCTTTGAT  200

seq1  AGGAGATCTTTCCATCTTTAGTGTCTTCTTTTGCTAGGATTAATCCTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATCTTTCCATCTTTAGTGTCTTCTTTTGCTAGGATTAATCCTTGG  250

seq1  TATTTTGTTTTTTAAGGCTATTATGAATGGGAATGTTTCTT  291
      |||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGTTTTTTAAGGCTATTATGAATGGGAATGTTTCTT  291

seq1: chrX_93209896_93210910
seq2: B6Ng01-150I24.g_88_1102

seq1  CTCTGTTTAGCTCTGTACCCATTTTTTTTTTAATTTATTCGTTATTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTTAGCTCTGTACCCATTTTTTTTTTAATTTATTCGTTATTTTGT  50

seq1  TTATTTACATTTCAAATGTTATCCCCCTTTCTGGTTTTCTCTTCGAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTACATTTCAAATGTTATCCCCCTTTCTGGTTTTCTCTTCGAAAAC  100

seq1  TCCCCATCCCACACCCTTCCTCCTGCCTCCCGGAGGATGCTCTCTTACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATCCCACACCCTTCCTCCTGCCTCCCGGAGGATGCTCTCTTACCC  150

seq1  ACCCACTCACTCTTGCCCCACCGCCCTAGCATTCCCCTATGCTCAGAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTCACTCTTGCCCCACCGCCCTAGCATTCCCCTATGCTCAGAACT  200

seq1  CATTTTTTAATTGGATTATTTGGTTTGGTGTTGTCTTAATTTCTTGGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTAATTGGATTATTTGGTTTGGTGTTGTCTTAATTTCTTGGGTT  250

seq1  CCTTATATATTTTGGATGTCAGCCGTCTGTCTGATGTAGGGTTGGTGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATATATTTTGGATGTCAGCCGTCTGTCTGATGTAGGGTTGGTGACT  300

seq1  ATTTTCCCAATCTGTAGGCTGCTGTTTTGTCCTATTAACAGTGTCCTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCCAATCTGTAGGCTGCTGTTTTGTCCTATTAACAGTGTCCTTTG  350

seq1  TCTTGCAGAAGCTTCTCAGTTTCATGAGGTCCCATTTATTAATTCTTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCAGAAGCTTCTCAGTTTCATGAGGTCCCATTTATTAATTCTTGAC  400

seq1  CTTAGTGCCTGAGCCATTGGTATTCTGTTCAGGAAGTTGTCTCCTATACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTGCCTGAGCCATTGGTATTCTGTTCAGGAAGTTGTCTCCTATACC  450

seq1  AACAAGTTCAAGACTATCCCCCACTTTCTGTTCTATAAGACATTTAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTTCAAGACTATCCCCCACTTTCTGTTCTATAAGACATTTAAATA  500

seq1  AAATATTTCTTGGTGCCAGCAAGATGGCTTAGTGGGTGGGAGAACTTACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTCTTGGTGCCAGCAAGATGGCTTAGTGGGTGGGAGAACTTACC  550

seq1  TCCAAACCTGAACACGTGAGACTGTTCCCTGGAGCCTACATGGTGAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAACCTGAACACGTGAGACTGTTCCCTGGAGCCTACATGGTGAAAGG  600

seq1  AGAGAATCTACTCACACAGGTTTTCCCCTGACTTACTCCATACATGTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATCTACTCACACAGGTTTTCCCCTGACTTACTCCATACATGTGCA  650

seq1  TAACCCCAAACAAACAAATAAATGTAAGAGCATATCCTGTGAAGTCTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCCAAACAAACAAATAAATGTAAGAGCATATCCTGTGAAGTCTTTA  700

seq1  -TTCCTGGGTTGTCTGTGAATTTTCTAGAAAAGATTTGTCATCAGCATAG  749
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGGGTTGTCTGTGAATTTTCTAGAAAAGATTTGTCATCAGCATAG  750

seq1  GGGTGCTGCAATAAACTAATGACCAGTCCAATCATTTCATAGAGTGAAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCTGCAATAAACTAATGACCAGTCCAATCATTTCATAGAGTGAAAA  800

seq1  GTTTGCTAACTTCATTGTATCTTTTCTTCACAATAAACTATTATCAGTCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTAACTTCATTGTATCTTTTCTTCACAATAAACTATTATCAGTCA  850

seq1  GACACC-TTAACAGAGGAAAAAAGACTGTTTATGCTGGGAATGGTTTGGG  898
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCTTTAACAGAGGAAAAAAGACTGTTTATGCTGGGAATGGTTTGGG  900

seq1  GAAAAGAATGGGCTTGGGCGTTGAGGACTAGAGAAATCTGACTTTCCTCC  948
      ||||| ||||||||||||||||||||||||||| ||||||||||| ||||
seq2  GAAAA-AATGGGCTTGGGCGTTGAGGACTAGAG-AATCTGACTTT-CTCC  947

seq1  TTAGAGCATGCTGGTAGAAAACCTGGGTTCTTTTCAGACA-TAAGTGGTC  997
      || |||||||||||||||||||||||| |||||||||||| |||||||||
seq2  TT-GAGCATGCTGGTAGAAAACCTGGGGTCTTTTCAGACATTAAGTGGTC  996

seq1  GTTAGA-GGAG-AGGTTTTC  1015
       ||||| |||| ||||||||
seq2  -TTAGAGGGAGAAGGTTTTC  1015