BAC Information

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BAC

Clone NameB6Ng01-150M15
ChromosomeX (Build37)
Map Location 31,263,676 - 31,411,880
singlet/doubletdoublet
Overlap geneLOC100040585, LOC100039362, LOC100040606
Upstream geneLOC100040458, LOC100040467, EG546176, LOC100040482, LOC629997, 1700017G21Rik, LOC665014, EG546205, LOC100040533, LOC100039328, LOC100040552, LOC100040575
Downstream geneLOC100040612, LOC673784, LOC100040650, LOC100040662, LOC100039419, LOC100039429, LOC100040698, LOC630028, LOC100040722, LOC100040732, LOC100040743, LOC385298, LOC100039460, LOC100040781, LOC100039515
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150M15.bB6Ng01-150M15.g
ACCDH946776DH946777
length1,156967
definitionDH946776|Mus musculus domesticus DNA, BAC clone: B6Ng01-150M15, 5' end.DH946777|Mus musculus domesticus DNA, BAC clone: B6Ng01-150M15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,263,676 - 31,264,837)(31,410,897 - 31,411,880)
sequence
gaattccttagttttcctgaaaggcagaacgtgccacaatgcctcaccct
gcttccacacctcttaccaatctatgtttctatcttcactctgttcctct
tccagggagcctctctctgccacccctctctctttggcttccttccacct
ctctttgggcagtcatatccttctgccccctcctccaccacccatctcca
gttccttctcctctcccccaccaagaccagaccagataagtcccagtcca
tttttagatgactgcttatgatactagctcacttttctcacaggctgaat
tgacagctgctccatccgtccattttccactcaccaaacacacccagcag
agtgcttcagacagcatgccatacccacagaagcctgcattcttcaggaa
aactggtatgtttgcattgagcccaggacacactctagaacagcaacctg
agcccatctggaaattacaacttcaactttatttccaaagaaattaactt
tatttctacagttgtgacaatgccgtgataaataattagaactctttctc
caagtgagtgacatgtatatggacatcatcttcatacttgatgaggtaca
ctctaggtttggtttcaatctggtaaatgatcatgccatccctcttggag
ccgtcatcatttgtgttttccacgtgttttcctatcaggccatccacaag
ctccaggtcgatgtctaaagaaggggggtcactgatcccctccatgattt
gtaggtcaccctctttaaagtcatccagaagctggtacgtgtataatatg
ggatctctctcataagtaatataaaagctgttatccaagataggcgcttg
gctcagaccatccccctccactcttccttagagccatgctcaccctcaaa
tagatgattaacttctttgcccactatggcatcaacaaagctggaatcag
tgacttccggatgataccaccctcttggcgataactttaagggacaatac
cctcttatctttgtaaagttcagagcatgcccagcgtcaatcccatcata
tttaacaggacgaggaaggtttactggcacctgatccggcccagttccat
tccctggtgtataggatcctctccctctcttccacttatgagattttgca
gcccac
gaattctttcttatttcaaccctgaccaagtatcattcagcagaaagttt
ttcagttttcatgagtatgtggtctttctgttgttttggttgttattgac
atctagccttatcctgatgttatctgatagaatgcatgagagtattccca
ttttcttgtatctgttgatgcttgttttatgaccaattatattatcagtt
ttggggaatgttccatgaggaactcagaagaatgtatattctcttgtttt
ggcatgaagtgttctattgatatctattaaatccatttgggtcaagactt
ctgttagtttcactgtgtctctgttattttgtttttctttttttctctct
ctcttttttttttttttttttttttttttagggatgacctgtttctgcac
cttaacactggtggtctcagctagaagacttgaagactggccagcacaca
gatataggcatttctaattttatgtacttgcaacttgatcatacagcatg
caagaatgtgttagagccaatgagatttcaaaaaatataattgaaaaaaa
taaacaaaggcaattaagtacacaactgtgttcagaatttattattgacg
ggtacttgagttcaggagttaaaaattcatttgatgaacttttaccttgg
gtttttttttatactactcaaatcaggcctatcaatttgtattcaagtga
ggttgttttgcatgtgtgttgacactcagcatccccctctacagagacac
agtggctgccttactccagaaagatctgtgtctaatttaggtcatctttc
tttctttcttttttttcccatttttattggtatttagctcatttacattt
ccaatgctattaccaaaagttccccatacccacccacccccactcctacc
accactcccctttggcctagcgtcctgtactggggctataagttgcaagt
cattggctctcattgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_31263676_31264837
seq2: B6Ng01-150M15.b_45_1200

seq1  GAATTCCTTAGTTTTCCTGAAAGGCAGAACGTGCCACAATGCCTCACCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAGTTTTCCTGAAAGGCAGAACGTGCCACAATGCCTCACCCT  50

seq1  GCTTCCACACCTCTTACCAATCTATGTTTCTATCTTCACTCTGTTCCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCACACCTCTTACCAATCTATGTTTCTATCTTCACTCTGTTCCTCT  100

seq1  TCCAGGGAGCCTCTCTCTGCCACCCCTCTCTCTTTGGCTTCCTTCCACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGAGCCTCTCTCTGCCACCCCTCTCTCTTTGGCTTCCTTCCACCT  150

seq1  CTCTTTGGGCAGTCATATCCTTCTGCCCCCTCCTCCACCACCCATCTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGGGCAGTCATATCCTTCTGCCCCCTCCTCCACCACCCATCTCCA  200

seq1  GTTCCTTCTCCTCTCCCCCACCAAGACCAGACCAGATAAGTCCCAGTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTCTCCTCTCCCCCACCAAGACCAGACCAGATAAGTCCCAGTCCA  250

seq1  TTTTTAGATGACTGCTTATGATACTAGCTCACTTTTCTCACAGGCTGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGATGACTGCTTATGATACTAGCTCACTTTTCTCACAGGCTGAAT  300

seq1  TGACAGCTGCTCCATCCGTCCATTTTCCACTCACCAAACACACCCAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGCTGCTCCATCCGTCCATTTTCCACTCACCAAACACACCCAGCAG  350

seq1  AGTGCTTCAGACAGCATGCCATACCCACAGAAGCCTGCATTCTTCAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTCAGACAGCATGCCATACCCACAGAAGCCTGCATTCTTCAGGAA  400

seq1  AACTGGTATGTTTGCATTGAGCCCAGGACACACTCTAGAACAGCAACCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGTATGTTTGCATTGAGCCCAGGACACACTCTAGAACAGCAACCTG  450

seq1  AGCCCATCTGGAAATTACAACTTCAACTTTATTTCCAAAGAAATTAACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCATCTGGAAATTACAACTTCAACTTTATTTCCAAAGAAATTAACTT  500

seq1  TATTTCTACAGTTGTGACAATGCCGTGATAAATAATTAGAACTCTTTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTACAGTTGTGACAATGCCGTGATAAATAATTAGAACTCTTTCTC  550

seq1  CAAGTGAGTGACATGTATATGGACATCATCTTCATACTTGATGAGGTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGAGTGACATGTATATGGACATCATCTTCATACTTGATGAGGTACA  600

seq1  CTCTAGGTTTGGTTTCAATCTGGTAAATGATCATGCCATCCCTCTTGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGTTTGGTTTCAATCTGGTAAATGATCATGCCATCCCTCTTGGAG  650

seq1  CCGTCATCATTTGTGTTTTCCACGTGTTTTCCTATCAGGCCATCCACAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCATCATTTGTGTTTTCCACGTGTTTTCCTATCAGGCCATCCACAAG  700

seq1  CTCCAGGTCGATGTCTAAAGAAGGGGGGTCACTGATCCCCTCCATGATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGTCGATGTCTAAAGAAGGGGGGTCACTGATCCCCTCCATGATTT  750

seq1  GTAGGTCACCCTCTTTAAAGTCATCCAGAAGCTGGTACGTGTATAATATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTCACCCTCTTTAAAGTCATCCAGAAGCTGGTACGTGTATAATATG  800

seq1  GGATCTCTCTCATAAGTAATATAAAAGCTGTTATCCAAGATAGGCGCTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTCTCTCATAAGTAATATAAAAGCTGTTATCCAAGATAGGCGCTTG  850

seq1  GCTCAGGACCATCCCCCTCCACTCTTCCTTAGAGCCATGCTCACCCTCAA  900
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCA-GACCATCCCCCTCCACTCTTCCTTAGAGCCATGCTCACCCTCAA  899

seq1  ATAGATGATTAACTTCTTTGCCCACTATGGCATCAACAAAGCTGGAATCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGATTAACTTCTTTGCCCACTATGGCATCAACAAAGCTGGAATCA  949

seq1  GTGAC-TCCGGATGATACCACCCTCTTGGCGATAACTTTTAGGGACAATA  999
      ||||| ||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTGACTTCCGGATGATACCACCCTCTTGGCGATAACTTTAAGGGACAATA  999

seq1  CCCTCTTATCTTTGTAAAGTTCCAGAGCATGCACAGCGTCAATCCCATCA  1049
      ||||||||||||||||||||| |||||||||| |||||||||||||||||
seq2  CCCTCTTATCTTTGTAAAGTT-CAGAGCATGCCCAGCGTCAATCCCATCA  1048

seq1  TATTTAACCAGGTACAGGGAAGGGTTTACTGGCACCTGATCCAGCACAGT  1099
      ||||||| |||| ||  |||| |||||||||||||||||||| || ||||
seq2  TATTTAA-CAGG-ACGAGGAA-GGTTTACTGGCACCTGATCCGGCCCAGT  1095

seq1  TCCATTCCACTGTGTGATAGACTCATCTCCTTCT-TTCCACTTATGAGAA  1148
      ||||||||   |||| ||||  || ||||| ||| |||||||||||||  
seq2  TCCATTCCCTGGTGT-ATAGGATCCTCTCCCTCTCTTCCACTTATGAG--  1142

seq1  ATTCTGCAGCCCAC  1162
      ||| ||||||||||
seq2  ATTTTGCAGCCCAC  1156

seq1: chrX_31410897_31411880
seq2: B6Ng01-150M15.g_67_1033 (reverse)

seq1  TGCAATGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGG  50
      |||||||||||  ||| | |||||||||   ||||| |||||||||||||
seq2  TGCAATGAGAG--CCAAT-GACTTGCAA--CTTATA-GCCCCAGTACAGG  44

seq1  GGAACGCCAGGGCCAAAAAGGGGGAGTGGGTGGGTAGGGGAGTGGGGGTG  100
         |||| | |||||||   |||||||||   ||||  ||||||||||||
seq2  ---ACGCTA-GGCCAAA---GGGGAGTGG--TGGTA--GGAGTGGGGGTG  83

seq1  GGTGGGTATGGGGGACTTTTGGT-ATAGCATTGGAAATGTAAATGAGCTA  149
      ||||||||||||| ||||||||| ||||||||||||||||||||||||||
seq2  GGTGGGTATGGGGAACTTTTGGTAATAGCATTGGAAATGTAAATGAGCTA  133

seq1  AATACCTAATAAAAATGGGAAAAAAAAGAAAGAAAGAAAGATGAACTAAA  199
      |||||| ||||||||||||||||||||||||||||||||||||| |||||
seq2  AATACC-AATAAAAATGGGAAAAAAAAGAAAGAAAGAAAGATGACCTAAA  182

seq1  TTAGACACAGATCCTTCTGGAGTAAGGCAGCCACTGTGTCTCTGTAGAGG  249
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTAGACACAGATCTTTCTGGAGTAAGGCAGCCACTGTGTCTCTGTAGAGG  232

seq1  GGGATGCTGAGTGTCAACACACATGCAAAACAACCTCACTTGAATACAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGCTGAGTGTCAACACACATGCAAAACAACCTCACTTGAATACAAA  282

seq1  TTGATAGGCCTGATTTGAGTAGTATAAAAAAAAACCCAAGGTAAAAGTTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAGGCCTGATTTGAGTAGTATAAAAAAAAACCCAAGGTAAAAGTTC  332

seq1  ATCAAATGAATTTTTAACTCCTGAACTCAAGTACCCGTCAATAATAAATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATGAATTTTTAACTCCTGAACTCAAGTACCCGTCAATAATAAATT  382

seq1  CTGAACACAGTTGTGTACTTAATTGCCTTTGTTTATTTTTTTCAATTATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACACAGTTGTGTACTTAATTGCCTTTGTTTATTTTTTTCAATTATA  432

seq1  TTTTTTGAAATCTCATTGGCTCTAACACATTCTTGCATGCTGTATGATCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGAAATCTCATTGGCTCTAACACATTCTTGCATGCTGTATGATCA  482

seq1  AGTTGCAAGTACATAAAATTAGAAATGCCTATATCTGTGTGCTGGCCAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCAAGTACATAAAATTAGAAATGCCTATATCTGTGTGCTGGCCAGT  532

seq1  CTTCAAGTCTTCTAGCTGAGACCACCAGTGTTAAGGTGCAGAAACAGGTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGTCTTCTAGCTGAGACCACCAGTGTTAAGGTGCAGAAACAGGTC  582

seq1  ATCCCTAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAAAAAAAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGAGAAAAAAAGA  632

seq1  AAAACAAAATAACAGAGACACAGTGAAACTAACAGAAGTCTTGACCCAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAATAACAGAGACACAGTGAAACTAACAGAAGTCTTGACCCAAA  682

seq1  TGGATTTAATAGATATCAATAGAACACTTCATGCCAAAACAAGAGAATAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTAATAGATATCAATAGAACACTTCATGCCAAAACAAGAGAATAT  732

seq1  ACATTCTTCTGAGTTCCTCATGGAACATTCCCCAAAACTGATAATATAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTTCTGAGTTCCTCATGGAACATTCCCCAAAACTGATAATATAAT  782

seq1  TGGTCATAAAACAAGCATCAACAGATACAAGAAAATGGGAATACTCTCAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCATAAAACAAGCATCAACAGATACAAGAAAATGGGAATACTCTCAT  832

seq1  GCATTCTATCAGATAACATCAGGATAAGGCTAGATGTCAATAACAACCAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTATCAGATAACATCAGGATAAGGCTAGATGTCAATAACAACCAA  882

seq1  AACAACAGAAAGACCACATACTCATGAAAACTGAAAAACTTTCTGCTGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAGAAAGACCACATACTCATGAAAACTGAAAAACTTTCTGCTGAA  932

seq1  TGATACTTGGTCAGGGTTGAAATAAGAAAGAATTC  984
      |||||||||||||||||||||||||||||||||||
seq2  TGATACTTGGTCAGGGTTGAAATAAGAAAGAATTC  967