MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-151K11
Chromosome	X (Build37)
Map Location	105,755,197 - 105,756,219
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Tbx22, 2610002M06Rik, Gm732, Gm378, LOC668516
Downstream gene	Gm379, Brwd3, 5730416F02Rik, Nsbp1, Sh3bgrl, EG622976, LOC100042831, LOC213474
Link	Open Mouse BAC browser

Click to get alignment info.

name	Tbx22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245572 MGI:2389465
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	2610002M06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67028 MGI:1914278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm732 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213450 MGI:2685578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm378 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213454 MGI:2685224
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC668516 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668516
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Gm379 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:236954 MGI:2685225
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Brwd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382236 MGI:3029414
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5730416F02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70550 MGI:1917800
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Nsbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50887 MGI:1355295
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sh3bgrl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56726 MGI:1930849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622976 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622976 MGI:3647255
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042831 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042831
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins

name	LOC213474 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:213474
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 19 ESTs, 4 Proteins pseudo : _no_value

name	Tbx22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21644588 GeneID:245572 MGI:2389465
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-box 22 transcript_id : NM_145224.1

name	Tbx22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375618 GeneID:245572 MGI:2389465
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-box 22 transcript_id : NM_181319.3

name	2610002M06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381786 GeneID:67028 MGI:1914278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2610002M06 gene transcript_id : NM_025921.2

name	Gm732 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359829 GeneID:213450 MGI:2685578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 732, (NCBI) transcript_id : NM_001033252.2

name	Gm378 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38086586 GeneID:213454 MGI:2685224
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : gene model 378, (NCBI) transcript_id : XM_142049.3

name	Gm379 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83003240 GeneID:236954 MGI:2685225
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : gene model 379, (NCBI) transcript_id : XM_142052.4

name	Brwd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125490357 GeneID:382236 MGI:3029414
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bromodomain and WD repeat domain containing 3 transcript_id : NM_001081477.1

name	Nsbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778914 GeneID:50887 MGI:1355295
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleosome binding protein 1 transcript_id : NM_016710.2

name	Sh3bgrl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543698 GeneID:56726 MGI:1930849
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SH3-binding domain glutamic acid-rich protein like transcript_id : NM_019989.2

name	EG622976 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85702299 GeneID:622976 MGI:3647255
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG622976 transcript_id : NM_001037917.1

name	LOC100042831 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271826 GeneID:100042831
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins product : similar to DnaJ (Hsp40) homolog, subfamily C, member 5 beta transcript_id : XM_001478909.1

name	Tbx22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21644589 CCDS:CCDS30350.1 GeneID:245572 MGI:2389465
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; T-box transcripttion factor protein 22 product : T-box 22 isoform 1 protein_id : NP_660259.1

name	Tbx22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31044451 CCDS:CCDS30351.1 GeneID:245572 MGI:2389465
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; T-box transcripttion factor protein 22 product : T-box 22 isoform 2 protein_id : NP_851836.1

name	2610002M06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229022 GeneID:67028 MGI:1914278
definition	GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : hypothetical protein LOC67028 protein_id : NP_080197.2

name	Gm732 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701758 CCDS:CCDS30352.1 GeneID:213450 MGI:2685578
definition	codon_start : 1 product : hypothetical protein LOC213450 protein_id : NP_001028424.1

name	Gm378 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38086587 GeneID:213454 MGI:2685224
definition	codon_start : 1 product : similar to BMI1-like protein protein_id : XP_142049.3

name	Gm379 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20985090 GeneID:236954 MGI:2685225
definition	codon_start : 1 product : similar to syntaxin 3A protein_id : XP_142052.1

name	Brwd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125490358 GeneID:382236 MGI:3029414
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : bromo domain-containing protein disrupted in leukemia product : bromodomain and WD repeat domain containing 3 protein_id : NP_001074946.1

name	Nsbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133778915 GeneID:50887 MGI:1355295
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005654 - nucleoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006356 - regulation of transcription from RNA polymerase I promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : nucleosome binding protein 45; snoRNA MBII-8 product : nucleosome binding protein 1 protein_id : NP_057919.2

name	Sh3bgrl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910548 GeneID:56726 MGI:1930849
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : SH3-binding domain glutamic acid-rich protein like protein_id : NP_064373.1

name	EG622976 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702300 CCDS:CCDS30354.1 GeneID:622976 MGI:3647255
definition	codon_start : 1 product : hypothetical protein LOC622976 protein_id : NP_001033006.1

name	LOC100042831 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271827 GeneID:100042831
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478959.1

name	LOC668516 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668516
definition	number : 1 pseudo : _no_value

name	LOC668516 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668516
definition	number : 2 pseudo : _no_value

name	LOC668516 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668516
definition	number : 3 pseudo : _no_value

name	LOC668516 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668516
definition	number : 4 pseudo : _no_value

name	5730416F02Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149271862 GeneID:70550 MGI:1917800
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5730416F02 gene transcript_id : XR_001637.2

name	LOC213474 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271828 GeneID:213474
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 19 ESTs, 4 Proteins product : similar to eukaryotic translation initiation factor 4B pseudo : _no_value transcript_id : XR_033986.1

clone name	MSMg01-411E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117A07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-151K11.b	B6Ng01-151K11.g
ACC	DH947420	DH947421
length	1,119	1,018
definition	DH947420\|Mus musculus domesticus DNA, BAC clone: B6Ng01-151K11, 5' end.	DH947421\|Mus musculus domesticus DNA, BAC clone: B6Ng01-151K11, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcacaatagagctgatctggatttgtccttgccatggaccaagaga gaaaaataatcaataatcatacatattagtaaagtctattaactataaca atgattggcccaacaagataaatccaacagtaaaatactggcatttacag cttggggtaaccaacagcttaaggtatgctcaatagaagggaattcatgt ctgatactataaacctaggcagtcacccatagctggtgaggctatggacc acataagaaaatctactactgtcaaaactagtataatttctagttgcaat ataaatatatatccttataccaatggatcaaagtcgttcccaccatttgt caaagtagcttctttttgtagctcatagaaactaccacagacatcctcag ttggtcaaaatgcagaaaactgatgatggggtgcctaactctacttgata catccatggcatgacccctgtaccaaatgttcaaggatatcatggaaaag ggggcagcaagatgtcaatagccagaataccaggatgtctgctgcaatat acatgaaagggaaactgcaactaggacatatcaaaaatattgcagcctga acaagactgacacaatgacatggatacaggaagactcacaagtctccaca cctagatgaagagctacagagaattaatggctgctgtgagaagaagaatt agcctcatccaggagtcacctctctgactcccaataacaagtaatcagta gccgggatggtggcacacacctttaatcccagcactcgggaggcagaggc aggcagatttctgtgttgaaggcagcctagtctacaaagtgagttccagg acagcctgggctatacagagaaacactatctcgaaaaaacaaaacaaaaa caaacaaacaaacaaacaaaacaagtggtcagtgttaatacatgtacata taagtaacaatgaatgcactcactagagtgtatgttgtgtatagatgagg gtatgtatgtttgcaatattataagaagaggttataaatttgagagattg agagacatagaaagctctctgagaggtaaagtgagagtggaaattatgta ataatgaatactcactgta	gaattcagaggcaatttttacaggagcagttttacagagacaggttgaag agaaaatatgctagacacaggtgaagacagaattacccagagaatgagaa ggagccagaagattagaacagattgctagagttagaggccaagcaaaaca attcagtgagaagctgagagaagtcagatgaatcagtcagtttagagagg aatttgtgccagagaacctgagttgagccagtgagccaaagttcagaaag aactagaaagggtgagcttattcagcagatagcctctgaaataacaatta aatcaggcgaataaaagttatgtttatactttacctcttgatatgtaaca ctctgctcacattgagttgaatcttgtttgtgtgcaagccacagcatatc aaaagttgaaagaaacacaattttaatttttgaagacttttttcctccag aggagtggaagaatccttattttaattacttacttaattaatttttattt tttatatatatgggtagtttgcttgggtgggtgtctatgcacaacatatg tgcctgttgttactaggtgccagaagaggggattggataccctagaactt cagttatagacacctgtgagcctccatgtggggtcctggcagttgaatcc aggtcatttgaaagagtaaccaatgctcttaacccctgagccatctcttc aatcctgaagtcttatttttaatctcaaagcaagaagtcagaatccaaga gttggtgatgatgtttatttttttctgtgagaattttggttttttctttc tgaccaaaacatagctaatatgtatctacacagcatgcatatactgaagt ggaaaagaatgaagaaaaatgaggctgagatgagtaactatttttttttt ggtttttgttttgtttttttttggtttgttttttttttggttatctgtga gaaaacagagaaaatgtatgttcaactatacgactataaatttcttagtg gactactggattcaatag
quality values	Open. Hide. 50 37 28 38 61 38 35 50 35 61 61 61 61 61 61 61 47 55 47 47 61 49 61 55 49 15 13 15 10 15 18 18 19 21 55 59 59 59 59 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 49 38 52 35 43 35 43 36 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 59 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 55 55 55 55 55 55 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 53 61 61 61 61 61 43 61 61 61 53 61 61 47 43 50 47 50 40 61 47 61 61 53 53 47 45 61 61 52 61 61 61 61 61 53 61 61 53 50 53 61 61 61 53 61 53 61 61 61 61 61 52 61 61 53 61 61 61 61 61 61 45 61 53 61 61 53 61 40 42 45 61 61 61 61 45 61 61 61 53 50 33 61 61 61 45 39 38 47 52 50 53 52 47 47 38 52 45 57 53 57 57 53 42 50 53 52 53 53 53 47 53 35 53 57 57 32 38 50 57 38 47 57 57 53 50 53 43 53 53 33 53 38 57 53 53 53 53 50 47 34 52 45 52 52 50 45 50 36 32 42 57 53 34 53 31 43 50 42 53 27 52 57 42 53 50 30 50 45 37 37 57 41 29 53 52 45 38 43 32 52 40 33 57 38 24 37 47 16 57 34 32 36 33 27 50 53 52 45 38 39 34 38 26 29 36 53 16 45 50 28 31 26 52 50 53 37 52 52 41 29 31 19 45 45 30 50 42 52 32 47 20 41 45 38 53 29 32 37 40 50 32 40 25 34 46 38 23 34 29 20 43 57 22 53 53 31 29 42 38 52 28 41 37 25 30 46 30 22 38 33 37 39 27 36 37 27 40 40 33 35 57 50 41 26 37 14 34 20 25 6 25 19 25 26 37 24 34 17 38 28 57 31 20 37 47 35 40 37 18 36 23 52 20 14 9 16 17 31 29 20 37 29 23 32 36 37 40 37 57 24 17 15 48 37 30 32 29 31 30 18 14 19 25 12 27 34 33 24 19 30 57 30 20 29 17 27 29 30 21 30 30 25 30 46 29 27 18 18 9 16 36 34 29 30 9 11 33 45 47 45 14 17 30 39 36 18 30 17 33 45 44 8 20 23 29 26 24 7 33 9 31 17 29 31 37 26 29 26 31 29 44 51 30 30 14 27 28 28 28 43 29 28 22 27 15 26 9 23 29 46 12 17 34 12 26 20 15 14 34 13 35 15 32 30 28 11 11 24 12 29 14 29 28 27 28 28 27 29 20 15 20 29 34 20 34 26 30 5 26 13 21 17 8 19 15 9 5 31 23 21 43 19 13 18 27 18 33 11 20 12 6 51 41 12 12 25 24 8 7 10 13 5 10 14 31 20 16 23 19 16 8 14 8 8 15 33 9 28 24 8 21 10 16 25 17 9 9 6 39 28 31 38 21 19 16 5 5 12 6 4 5 18 11 5 7 8 4 14 11 19 7 4 29 33 20 11 13 6 9 12 6 9 14 19 13 15 11 28 12 15 35 19 15 6 7 25 6 9 5 5 15 25 17 35 17 22 24 29 16 26 16 14 29 8 9 9 21 29 11 13 6 10 16 29 11 8 7 7 5 7 18	Open. Hide. 61 43 50 39 61 12 12 9 8 8 7 7 9 9 10 19 25 25 50 50 61 38 61 61 61 61 61 55 61 61 61 61 61 61 61 49 61 61 61 47 61 55 61 61 61 61 61 61 37 28 50 23 28 28 35 43 43 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 59 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 52 52 55 55 52 55 52 52 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 50 50 50 50 50 50 61 55 50 61 55 55 61 61 61 61 61 61 61 55 61 47 55 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 53 61 53 61 61 61 53 61 61 61 61 52 61 61 61 61 61 61 61 37 61 50 61 53 61 52 61 61 50 61 43 61 52 61 61 61 52 61 47 61 50 50 61 52 50 61 31 61 61 61 39 32 61 61 61 47 39 50 53 52 47 50 50 52 61 61 53 61 61 53 39 39 52 61 43 50 61 61 61 61 33 42 61 61 61 45 50 53 38 47 47 47 42 61 35 47 61 39 61 61 61 61 39 46 46 47 47 47 38 53 50 52 53 39 52 45 39 36 57 28 45 39 42 50 29 34 57 53 47 53 57 46 34 53 36 42 53 53 38 47 14 53 43 57 33 53 45 57 22 12 43 27 42 47 50 53 53 53 28 43 53 27 50 38 38 30 42 20 31 30 36 45 39 45 50 50 57 53 33 40 31 35 45 42 42 53 57 53 38 18 21 38 45 33 35 22 50 40 36 38 43 38 45 53 21 33 36 40 38 39 43 32 42 32 52 21 45 33 52 33 38 52 39 36 22 50 50 33 39 37 32 38 37 57 36 17 14 57 57 57 57 57 50 37 28 53 28 52 50 24 38 16 50 57 57 14 13 12 7 10 17 18 53 34 30 37 57 21 32 39 32 31 8 17 12 34 12 10 10 7 10 10 9 19 34 24 29 25 16 24 52 26 11 23 19 10 15 36 15 53 12 30 32 24 38 38 29 10 33 17 20 35 42 27 53 20 28 30 29 28 16 23 57 53 50 18 25 37 27 37 32 22 14 37 44 45 47 40 27 25 25 6 11 20 34 35 47 9 9 10 33 31 16 11 15 29 29 9 36 35 53 57 37 41 14 46 36 53 12 30 28 43 40 44 47 21 25 5 41 24 31 53 19 37 53 24 53 37 40 24 25 15 11 14 13 17 24 8 47 17 16 33 44 35 38 30 6 6 8 22 17 8 11 4 10 5 22 11 18 9 11 33 28 16 7 7 24 29 6 30 33 27 14 9 9 11 14 17 10 13 16 24 15 19 13 10 23 12 7 23 7 23 9 7 7 21 25 29 21 17 29 24 20 17 12 14 10 6 29 14 20 9 5 7 5 5 22 18 16 21 29 20 17 14 17 5 9

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_105755197_105756219
seq2: B6Ng01-151K11.g_69_1086 (reverse)

seq1  CCATTGAATCCAGTAGTCCACTATGAAATTTAATAGTCGTATAGTTGAAC  50
      | ||||||||||||||||||||| ||||||| ||||||||||||||||||
seq2  CTATTGAATCCAGTAGTCCACTAAGAAATTT-ATAGTCGTATAGTTGAAC  49

seq1  ATACATTTTCTCTGTTTTCTAAAAAAAAAAACAAAAAAAAAAAACAAAAC  100
      |||||||||||||||||||| | | | ||     |||||||||||||| |
seq2  ATACATTTTCTCTGTTTTCTCACAGATAA---CCAAAAAAAAAACAAACC  96

seq1  AAAAAAAAAACAAAAACAAAAAACAAAAAAAAAATAGTTACTCATCTCAG  150
      |||||||||   |||||||||| |||||||||||||||||||||||||||
seq2  AAAAAAAAA--CAAAACAAAAACCAAAAAAAAAATAGTTACTCATCTCAG  144

seq1  CCTCATTTTTCTTCATTCTTTTCCACTTCAGTATATGCATGCTGTGTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTTTTCTTCATTCTTTTCCACTTCAGTATATGCATGCTGTGTAGA  194

seq1  TACATATTAGCTATGTTTTGGTCAGAAAG-AAAAACCAAAATTCTCACAG  249
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TACATATTAGCTATGTTTTGGTCAGAAAGAAAAAACCAAAATTCTCACAG  244

seq1  AAAAAAATAAACATCATCACCAACTCTTGGATTCTGACTTCTTGCTTTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATAAACATCATCACCAACTCTTGGATTCTGACTTCTTGCTTTGA  294

seq1  GATTAAAAATAAGACTTCAGGATTGAAGAGATGGCTCAGGGGTTAAGAGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAAATAAGACTTCAGGATTGAAGAGATGGCTCAGGGGTTAAGAGC  344

seq1  ATTGGTTACTCTTTCAAATGACCTGGATTCAACTGCCAGGACCCCACATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTTACTCTTTCAAATGACCTGGATTCAACTGCCAGGACCCCACATG  394

seq1  GAGGCTCACAGGTGTCTATAACTGAAGTTCTAGGGTATCCAATCCCCTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCACAGGTGTCTATAACTGAAGTTCTAGGGTATCCAATCCCCTCT  444

seq1  TCTGGCACCTAGTAACAACAGGCACATATGTTGTGCATAGACACCCACCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCACCTAGTAACAACAGGCACATATGTTGTGCATAGACACCCACCC  494

seq1  AAGCAAACTACCCATATATATAAAAAATAAAAATTAATTAAGTAAGTAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAACTACCCATATATATAAAAAATAAAAATTAATTAAGTAAGTAAT  544

seq1  TAAAATAAGGATTCTTCCACTCCTCTGGAGGAAAAAAGTCTTCAAAAATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAGGATTCTTCCACTCCTCTGGAGGAAAAAAGTCTTCAAAAATT  594

seq1  AAAATTGTGTTTCTTTCAACTTTTGATATGCTGTGGCTTGCACACAAACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGTGTTTCTTTCAACTTTTGATATGCTGTGGCTTGCACACAAACA  644

seq1  AGATTCAACTCAATGTGAGCAGAGTGTTACATATCAAGAGGTAAAGTATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCAACTCAATGTGAGCAGAGTGTTACATATCAAGAGGTAAAGTATA  694

seq1  AACATAACTTTTATTCGCCTGATTTAATTGTTATTTCAGAGGCTATCTGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAACTTTTATTCGCCTGATTTAATTGTTATTTCAGAGGCTATCTGC  744

seq1  TGAATAAGCTCACCCTTTCTAGTTCTTTCTGAACTTTGGCTCACTGGCTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAGCTCACCCTTTCTAGTTCTTTCTGAACTTTGGCTCACTGGCTC  794

seq1  AACTCAGGTTCTCTGGCACAAATTCCTCTCTAAACTGACTGATTCATCTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGGTTCTCTGGCACAAATTCCTCTCTAAACTGACTGATTCATCTG  844

seq1  ACTTCTCTCAGCTTCTCACTGAATTGTTTTGCTTGGCCTCTAACTCTAGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCTCAGCTTCTCACTGAATTGTTTTGCTTGGCCTCTAACTCTAGC  894

seq1  AATCTGTTCTAATCTTCTGGCTCCTTCTCATTCTCTGGGTAATTCTGTCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTTCTAATCTTCTGGCTCCTTCTCATTCTCTGGGTAATTCTGTCT  944

seq1  TCACCTGTGTCTAGCATATTTTCTCTTCAACCTGTCTCTGTAAAACTGCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGTGTCTAGCATATTTTCTCTTCAACCTGTCTCTGTAAAACTGCT  994

seq1  CCTGTAAAAATTGCCTCTGAATTC  1023
      ||||||||||||||||||||||||
seq2  CCTGTAAAAATTGCCTCTGAATTC  1018

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information