BAC Information

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BAC

Clone NameB6Ng01-152C15
ChromosomeX (Build37)
Map Location 60,746,152 - 60,896,123
singlet/doubletdoublet
Overlap genenone
Upstream gene1700019B21Rik, LOC671878, LOC666695, EG627420
Downstream geneLOC666729, EG627470, 3830417A13Rik, Slitrk4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152C15.bB6Ng01-152C15.g
ACCDH947805DH947806
length1,1321,147
definitionDH947805|Mus musculus domesticus DNA, BAC clone: B6Ng01-152C15, 5' end.DH947806|Mus musculus domesticus DNA, BAC clone: B6Ng01-152C15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,746,152 - 60,747,303)(60,894,976 - 60,896,123)
sequence
gaattcagttatgttttcaaacacggttctcatcagtttaggtttagtag
atgaaacatagatgtgtctcagggtatatcaaaagagctatttcactaaa
agagaaagaaaattcctttcatttttcaaagtcatccattcttcccttat
taaaatatataacaaaccatttacatatttcactagtcatattaaataca
tttatttttgtttacctagcatattacattttcaattataatttgacatt
atctgtttcaagctttacaataaccttattagcatctacaaaacagcaat
tgtatatcattatttctttccttctatatcaaatgttatagttcacagtc
ttttacatcaaataattatgttatttactataccactgaagaggatctac
aaatttcttagacaaaaacactttctaaatgtctctgcattgggctggga
atctaagataaagtaattaaaataaaactctgcagggtgagtcgcactat
ggagatatatttggcactggtgttgttttaattacctatgtcctgaagag
cccagagtcttcaattagaggacaaagaaattgatagtcagagaagactt
gattaaatagtctagtggaaggaggaatttgtacttgagttataagaaaa
cccatagctagggacaaatggtaaatgtcatttatagcagtaacttagta
gaaagcatgaaatggacataaagtaatcttagatatacagtacaagggag
atggtagcaaacagtataaaagtgtttcctaggtagagcttataatctag
tggagaagagcaagtacatgcggaacaataagggacatatacgtttactt
taactaatccagtgaaaagaaaaataatctcttttaaaaaatacaaatat
ttatattatctgtggacctgataatcactagttatataaattgaacttgt
aggatgttccatatttcacctatatgtctgatagattactagtttcagta
gaaatcttgcctgggctactagccaaagcatggaagacacctcctccgct
acctagatcatttcaaatattgtgctggtcaactggcaggttattgagag
caagaagaaaggaacatgcatccatttatcac
gaattctccagacaaggtcagagaagacctccccttcccacatgaaggga
gttacccaatttgtgctatgtccagaagctatgtaaatcgtagacttcta
ccttaattagcagagttttctcacagtaaaccacaaacacgtatgcaatg
ctcacacaagacagaaggcaacctcatcagttagactagaactagagtta
tataagcagatgtgaaccacccaatgtgggtgctggacccaagcatagcc
caatgtaagagcaacaaatgctattaacatccaagtaatctcttggctcc
tagaacagcatttaattatagatgtacacctaaattaccattgagattaa
ctttgagaaattttaaaagtagttacaaaataaaaatctgtgtagtccaa
aacgaaagcaaggaaacaaagacaaaatcacaggcagaataagttaagtg
aaattaaagactgatttcttgattgtgaagttcagtcagttctagtggaa
gagagttttaaaatttcctgcccttcagaccttgaaaaagaatataaata
ccaatttacctaaacatatttccatgacatcctgtctgaatttgttgaat
tagctgattagatgtccccttgtgattgggagcaattgctgaaattgtaa
acaagataaaactgctctctcttggaatatttgtactgtaatcagtgagt
gcaatttgagctttgtggagaaagtttcaacttcacacagtgcccgaaag
ctgtgtatccaggcaacatagaatcttgataaaagggatatggtctcaat
tatctgaacagcttccaatctaaagaaaatccattttgtctggctctcca
aagcaatggaaagaaagagccagtcaatgatctatagagcattgctgatc
ctatgaagaatgtcaagctgcttctcttcataggtgatagatactagaga
aagaaaaataatatcagagtccatgtgttcaccagctaaccatccttaca
cctacaaaagtctgtgttgttccagtattacagtggagctcagcagctgt
acccaagatgtagaggtggccttgattacctgaacgcaaagagaaatctt
gtaactttagcatcttggaagaaatatacagattagatttcctaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_60746152_60747303
seq2: B6Ng01-152C15.b_45_1176

seq1  GAATTCAGTTATGTTTTCAAACACGGTTCTCATCAGTTTAGGTTTAGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTATGTTTTCAAACACGGTTCTCATCAGTTTAGGTTTAGTAG  50

seq1  ATGAAACATAGATGTGTCTCAGGGTATATCAAAAGAGCTATTTCACTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACATAGATGTGTCTCAGGGTATATCAAAAGAGCTATTTCACTAAA  100

seq1  AGAGAAAGAAAATTCCTTTCATTTTTCAAAGTCATCCATTCTTCCCTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGAAAATTCCTTTCATTTTTCAAAGTCATCCATTCTTCCCTTAT  150

seq1  TAAAATATATAACAAACCATTTACATATTTCACTAGTCATATTAAATACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATATAACAAACCATTTACATATTTCACTAGTCATATTAAATACA  200

seq1  TTTATTTTTGTTTACCTAGCATATTACATTTTCAATTATAATTTGACATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTGTTTACCTAGCATATTACATTTTCAATTATAATTTGACATT  250

seq1  ATCTGTTTCAAGCTTTACAATAACCTTATTAGCATCTACAAAACAGCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTTCAAGCTTTACAATAACCTTATTAGCATCTACAAAACAGCAAT  300

seq1  TGTATATCATTATTTCTTTCCTTCTATATCAAATGTTATAGTTCACAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATCATTATTTCTTTCCTTCTATATCAAATGTTATAGTTCACAGTC  350

seq1  TTTTACATCAAATAATTATGTTATTTACTATACCACTGAAGAGGATCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACATCAAATAATTATGTTATTTACTATACCACTGAAGAGGATCTAC  400

seq1  AAATTTCTTAGACAAAAACACTTTCTAAATGTCTCTGCATTGGGCTGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCTTAGACAAAAACACTTTCTAAATGTCTCTGCATTGGGCTGGGA  450

seq1  ATCTAAGATAAAGTAATTAAAATAAAACTCTGCAGGGTGAGTCGCACTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGATAAAGTAATTAAAATAAAACTCTGCAGGGTGAGTCGCACTAT  500

seq1  GGAGATATATTTGGCACTGGTGTTGTTTTAATTACCTATGTCCTGAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATATATTTGGCACTGGTGTTGTTTTAATTACCTATGTCCTGAAGAG  550

seq1  CCCAGAGTCTTCAATTAGAGGACAAAGAAATTGATAGTCAGAGAAGACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGTCTTCAATTAGAGGACAAAGAAATTGATAGTCAGAGAAGACTT  600

seq1  GATTAAATAGTCTAGTGGAAGGAGGAATTTGTACTTGAGTTATAAGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAATAGTCTAGTGGAAGGAGGAATTTGTACTTGAGTTATAAGAAAA  650

seq1  CCCATAGCTAGGGACAAATGGTAAATGTCATTTATAGCAGTAACTTAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAGCTAGGGACAAATGGTAAATGTCATTTATAGCAGTAACTTAGTA  700

seq1  GAAAGCATGAAATGGACATAAAGTAATCTTAGATATACAGTACAAGGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCATGAAATGGACATAAAGTAATCTTAGATATACAGTACAAGGGAG  750

seq1  ATGGTAGCAAACAGTATAAAAGTGTTTCCTAGGTAGAGCTTATAATCTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGCAAACAGTATAAAAGTGTTTCCTAGGTAGAGCTTATAATCTAG  800

seq1  TGGAGAAGAGCAAGTACATGCGGAACAATAAGGGACATATACGTTTACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAGAGCAAGTACATGCGGAACAATAAGGGACATATACGTTTACTT  850

seq1  TAACTAATCCAGTGAAAAGAAAAAATAATCTCTTTTAAAAAAATACAAAT  900
      ||||||||||||||||||| |||||||||||||||| |||||||||||||
seq2  TAACTAATCCAGTGAAAAG-AAAAATAATCTCTTTT-AAAAAATACAAAT  898

seq1  ATTTATATTATCTGTGGACCTGATAATCACTAGTTAATATAAATTGAACT  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATTTATATTATCTGTGGACCTGATAATCACTAGTT-ATATAAATTGAACT  947

seq1  TGTAGGAATGTTCCAATATTTCACTTATATGTCTGATAG-TTACTAGTTT  999
      |||||| ||||||| ||||||||| |||||||||||||| ||||||| ||
seq2  TGTAGG-ATGTTCC-ATATTTCACCTATATGTCTGATAGATTACTAG-TT  994

seq1  TCAGTAGAAATCTTGCCTGGGCTACTAGCCAAAGCATGGAAAGACACCTC  1049
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCAGTAGAAATCTTGCCTGGGCTACTAGCCAAAGCATGG-AAGACACCTC  1043

seq1  CTTCAGCTACCTAGATCATTTCAAAATATTGTTCCTTGGTTCAACTGGCA  1099
      | || ||||||||||||||||| ||||||||| |  ||| ||||||||||
seq2  C-TCCGCTACCTAGATCATTTC-AAATATTGTGC--TGG-TCAACTGGCA  1088

seq1  AGTATAGTGAAAG-AGCAAGAAAGGAAGTGTAATCATGCATTCCATTTTA  1148
       || || ||| || |  ||||||||||       |||||| |||| ||||
seq2  GGT-TATTGAGAGCAAGAAGAAAGGAA-------CATGCA-TCCA-TTTA  1128

seq1  TCAC  1152
      ||||
seq2  TCAC  1132

seq1: chrX_60894976_60896123
seq2: B6Ng01-152C15.g_69_1215 (reverse)

seq1  ATTTAGGAAATCTAATCTGTA-ATTTCTTCAAGGATGCTAAAGTTACATG  49
      ||||||||||||||||||||| |||||||| | ||||||||||||||| |
seq2  ATTTAGGAAATCTAATCTGTATATTTCTTCCAAGATGCTAAAGTTACAAG  50

seq1  AATTCTACTTTGCTGTCA-GTAATACAAGG-CACCTCTACATCTTGGGTA  97
      | |||| ||||||  ||| ||||| ||||| |||||||||||||||||||
seq2  ATTTCT-CTTTGCGTTCAGGTAAT-CAAGGCCACCTCTACATCTTGGGTA  98

seq1  CAGCTGCTTGAGCTCCACTGTAATACATAGAACATACACAGACTTTTGTA  147
      ||||||| |||||||||||||||||| | ||||| |||||||||||||||
seq2  CAGCTGC-TGAGCTCCACTGTAATAC-TGGAACA-ACACAGACTTTTGTA  145

seq1  GGTGTAAGGATGGTTAGCT-GTGAACACATGGACTCTGATATTATTTTTC  196
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGTGTAAGGATGGTTAGCTGGTGAACACATGGACTCTGATATTATTTTTC  195

seq1  TTTCTCTAGTATCTATCACCTATGAAGAGAAGCAGCTTGACATTCTTCAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTAGTATCTATCACCTATGAAGAGAAGCAGCTTGACATTCTTCAT  245

seq1  AGGATCAGCAATGCTCTATAGATCATTGACTGGCTCTTTCTTTCCATTGC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCAGCAATGCTCTATAGATCATTGACTGGCTCTTTCTTTCCATTGC  295

seq1  TTTGGAGAGCCAGACAAAATGGATTTTCTTTAGATTGGAAGCTGTTCAGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGAGCCAGACAAAATGGATTTTCTTTAGATTGGAAGCTGTTCAGA  345

seq1  TAATTGAGACCATATCCCTTTTATCAAGATTCTATGTTGCCTGGATACAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAGACCATATCCCTTTTATCAAGATTCTATGTTGCCTGGATACAC  395

seq1  AGCTTTCGGGCACTGTGTGAAGTTGAAACTTTCTCCACAAAGCTCAAATT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCGGGCACTGTGTGAAGTTGAAACTTTCTCCACAAAGCTCAAATT  445

seq1  GCACTCACTGATTACAGTACAAATATTCCAAGAGAGAGCAGTTTTATCTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCACTGATTACAGTACAAATATTCCAAGAGAGAGCAGTTTTATCTT  495

seq1  GTTTACAATTTCAGCAATTGCTCCCAATCACAAGGGGACATCTAATCAGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACAATTTCAGCAATTGCTCCCAATCACAAGGGGACATCTAATCAGC  545

seq1  TAATTCAACAAATTCAGACAGGATGTCATGGAAATATGTTTAGGTAAATT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCAACAAATTCAGACAGGATGTCATGGAAATATGTTTAGGTAAATT  595

seq1  GGTATTTATATTCTTTTTCAAGGTCTGAAGGGCAGGAAATTTTAAAACTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTATATTCTTTTTCAAGGTCTGAAGGGCAGGAAATTTTAAAACTC  645

seq1  TCTTCCACTAGAACTGACTGAACTTCACAATCAAGAAATCAGTCTTTAAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCACTAGAACTGACTGAACTTCACAATCAAGAAATCAGTCTTTAAT  695

seq1  TTCACTTAACTTATTCTGCCTGTGATTTTGTCTTTGTTTCCTTGCTTTCG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTAACTTATTCTGCCTGTGATTTTGTCTTTGTTTCCTTGCTTTCG  745

seq1  TTTTGGACTACACAGATTTTTATTTTGTAACTACTTTTAAAATTTCTCAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGACTACACAGATTTTTATTTTGTAACTACTTTTAAAATTTCTCAA  795

seq1  AGTTAATCTCAATGGTAATTTAGGTGTACATCTATAATTAAATGCTGTTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATCTCAATGGTAATTTAGGTGTACATCTATAATTAAATGCTGTTC  845

seq1  TAGGAGCCAAGAGATTACTTGGATGTTAATAGCATTTGTTGCTCTTACAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGCCAAGAGATTACTTGGATGTTAATAGCATTTGTTGCTCTTACAT  895

seq1  TGGGCTATGCTTGGGTCCAGCACCCACATTGGGTGGTTCACATCTGCTTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTATGCTTGGGTCCAGCACCCACATTGGGTGGTTCACATCTGCTTA  945

seq1  TATAACTCTAGTTCTAGTCTAACTGATGAGGTTGCCTTCTGTCTTGTGTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTCTAGTTCTAGTCTAACTGATGAGGTTGCCTTCTGTCTTGTGTG  995

seq1  AGCATTGCATACGTGTTTGTGGTTTACTGTGAGAAAACTCTGCTAATTAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGCATACGTGTTTGTGGTTTACTGTGAGAAAACTCTGCTAATTAA  1045

seq1  GGTAGAAGTCTACGATTTACATAGCTTCTGGACATAGCACAAATTGGGTA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAAGTCTACGATTTACATAGCTTCTGGACATAGCACAAATTGGGTA  1095

seq1  ACTCCCTTCATGTGGGAAGGGGAGGTCTTCTCTGACCTTGTCTGGAGAAT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCTTCATGTGGGAAGGGGAGGTCTTCTCTGACCTTGTCTGGAGAAT  1145

seq1  TC  1148
      ||
seq2  TC  1147