BAC Information

Click to search

BAC

Clone NameB6Ng01-152K09
ChromosomeX (Build37)
Map Location 15,079,487 - 15,080,231
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668991, 4930403L05Rik
Downstream geneLOC100043949, LOC100043950
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152K09.bB6Ng01-152K09.g
ACCDH948172DH948173
length893912
definitionDH948172|Mus musculus domesticus DNA, BAC clone: B6Ng01-152K09, 5' end.DH948173|Mus musculus domesticus DNA, BAC clone: B6Ng01-152K09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaaaggctcaacaagctgaagtgcccaagtgaggatgcctcagc
ccctcttggtagagagaagaaagcaatcacaagtctggagggaaggagtg
acttttgagggaaaatgaattgggttgggggaagtttgggctagagggga
acctgacctggtattgggtgagggaaaaggactgaagccctgaggaccag
aagaatgaatgtatactggtaacctcaggaaatagaagtctggagggtcc
tgcagaatgcaccagatacctgggaggtgagattcttccacgaatcatag
ggagagaacttagatgaaatgccttacagtagggagagggaatttataga
gcccacctccagcaggaagacaggacatcaagtgagggatggggttgccg
tctcacagtcatatctctgacccataattgtttctgtctgaaagaattac
agggatggaaatggagaggtgcttgagaaaaagaaggtccagtgacagga
ccaaagtgggctccagctaaggagaagctttgcaattttatgtggaccct
tttgtcaatttcttgatgttacagcacaaaccatttactgttctgtccag
gagtgttttccctgtgcacaaatgttcgtagtttttccccactttctcct
ctataaagtttcagtgtctctgtgtttctgtggaggtccttaatgcactt
ggactttgagctatgtacaaggagataagaatggattgattcatagtcac
atgctatctgcctgttgagccagcacccatttgttgaaaatgctgtcttt
ttttccactggatggttttatttcctttttcaaaatcagttgaccatagt
gtatggagttcatttatgggtcttcaattctatttccattgat
gaattcccaaaactagagtcaagtgaaggttttcctggactcttttcaga
atccacttagaattctgcttaaaataggagagcaaggctgccttacattc
acagagagcactatttgatggtgtctcttaatgaaaggactatcagcaaa
ttttcagacctcattttatttatttatttttttaacttaaacttttattg
ggtggttataccttagtactatatttacaacatttcccagtttcatcttc
ttttttttattacgtattttcctcaattatatttccaatgctatcccaaa
agtccccccccactccaccccccgactcccctacccacccattccaattt
tttggccctggcattctcctgtacaggggcatataaagtttgcctgtcca
atgggcctctctttccagtgatggccgactaggccatcttttgatccata
tgcagctagagtcaagagctcaggggtactggttacttcataatgttgca
ccgacagggttgcagatctctttagctccttggatactttctctagctcc
tccattgggggccctgtgatccatccaatagttgactgtgtgcatccaat
tctgtgttttgctaggccctggcctagtctcaaaagagacagcaatatca
cagtccttgcaacaaacgcttgctagtgtatacaatggtgtcatagtttt
ggaggctaattatgggatggatccctggatatggcagtctctagatgtcc
atccttttgtctcagctccaactttgttttctgtaactcctttccatggg
tgattgtttccaattctaagaaggggcaaagtggtccatactttggtttt
tgttctttctcagttcatgtgttttgcaaattgtacgttatattcgcgat
atactaagtttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_15079487_15080231
seq2: B6Ng01-152K09.g_72_818

seq1  GAATTCCCAAAACTAGAGTCAAGTGAAGGTTTTCCTGGACTCTTTTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAAACTAGAGTCAAGTGAAGGTTTTCCTGGACTCTTTTCAGA  50

seq1  ATCCACTTAGAATTCTGCTTAAAATAGGAGAGCAAGGCTGCCTTACATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTTAGAATTCTGCTTAAAATAGGAGAGCAAGGCTGCCTTACATTC  100

seq1  ACAGAGAGCACTATTTGATGGTGTCTCTTAATGAAAGGACTATCAGCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGCACTATTTGATGGTGTCTCTTAATGAAAGGACTATCAGCAAA  150

seq1  TTTTCAGACCTCATTTTATTTATTTATTTTTTTAACTTAAACTTTTATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGACCTCATTTTATTTATTTATTTTTTTAACTTAAACTTTTATTG  200

seq1  GGTGGTTATACCTTAGTACTATATTTACAACATTTCCCAGTTTCATCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTTATACCTTAGTACTATATTTACAACATTTCCCAGTTTCATCTTC  250

seq1  TTTTTTTTATTACGTATTTTCCTCAATTATATTTCCAATGCTATCCCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTATTACGTATTTTCCTCAATTATATTTCCAATGCTATCCCAAA  300

seq1  AGTCCCCCCCCACTCCACCCCCCGACTCCCCTACCCACCCATTCCAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCCCCCCACTCCACCCCCCGACTCCCCTACCCACCCATTCCAATTT  350

seq1  TTTGGCCCTGGCATTCTCCTGTACAGGGGCATATAAAGTTTGCCTGTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCCCTGGCATTCTCCTGTACAGGGGCATATAAAGTTTGCCTGTCCA  400

seq1  ATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATCCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATCCATA  450

seq1  TGCAGCTAGAGTCAAGAGCTCAGGGGTACTGGTTACTTCATAATGTTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTAGAGTCAAGAGCTCAGGGGTACTGGTTACTTCATAATGTTGCA  500

seq1  CCGACAGGGTTGCAGATCTCTTTAGCTCCTTGGATACTTTCTCTAGCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACAGGGTTGCAGATCTCTTTAGCTCCTTGGATACTTTCTCTAGCTCC  550

seq1  TCCATTGGGGGCCCTGTGATCCATCCAATAGTTGACTGTGTGCATCCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGGGGGCCCTGTGATCCATCCAATAGTTGACTGTGTGCATCCAAT  600

seq1  TCTGTG-TTTGCTAGGCCCTGGCCTAGTCTCAAAAGAGACAGCAATATCA  649
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTTTTGCTAGGCCCTGGCCTAGTCTCAAAAGAGACAGCAATATCA  650

seq1  CAGTCCTTGCAACAAACGCTTGCTAGTGTATACAATGGTGTCATAG-TTT  698
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAGTCCTTGCAACAAACGCTTGCTAGTGTATACAATGGTGTCATAGTTTT  700

seq1  GGAGGCTAATTATGGGATGGATCCCTGGATATGGCAGTCTCTAGATG  745
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTAATTATGGGATGGATCCCTGGATATGGCAGTCTCTAGATG  747