BAC Information

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BAC

Clone NameB6Ng01-153L04
ChromosomeX (Build37)
Map Location 85,151,019 - 85,284,225
singlet/doubletdoublet
Overlap genenone
Upstream geneIl1rapl1, LOC667876
Downstream geneEG667883, LOC667891, EG245506, LOC667911, LOC100041707, EG436213, LOC667919, LOC100041727
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153L04.bB6Ng01-153L04.g
ACCDH948935DH948936
length1,0511,045
definitionDH948935|Mus musculus domesticus DNA, BAC clone: B6Ng01-153L04, 5' end.DH948936|Mus musculus domesticus DNA, BAC clone: B6Ng01-153L04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,151,019 - 85,152,082)(85,283,178 - 85,284,225)
sequence
gaattccagcattactcttgtggagagcaaacacgaacctaatggtttga
attttccctttgtgggctcttcctgccagtatgtttaacaaatagttgaa
taaacctgatgacctttatcatctttctgtgtgttagaatttcaaaacat
tgaggaaactttgcaaacttgatagatacggtgagttgatgcttattcaa
actctataagtattgtaaaatggagggaatactagtttcttttctttatc
tgcactcatattggtttctgatatcagagtactaggcagtggtacaaaag
acattttttcttagttctcagtccacattgggattatgtagagagctttt
aaacaaacccatattctcagtggtaccaaaggcactgatctaagtattac
tattcataataaagtccttagcaatcattgctttcaatggtctcttagag
gatttttcatctataaggacattaacagtttgtttataattctttgagat
taagaagagcctttcctattatgggatgtatagatacatctgctgcctct
accctcaaatcatagttggcagtgtttttatacagttgccataagcaaat
atagcatgaaatgatgcaaaataaatctgtggcatatcttatttccctaa
atcacagttctaatcactatagagaataatacaatttgttaaatagaaat
tatgtccttagatcatggagaagagcaaaaccagtaacctggaattactg
agtgagagtgtaagaactgaagctgccacgtagtgcaacttatgcatttg
tcctatgtgtcatgtgtcaatagaattctcttatgaaagaaaaaatgatt
aagaattcacaactccattttcttccaaagtaatcatcaaaattaagaat
gaatagaattttactagacagcataatagccttcagattatgtctatgtt
ctcactcccacaatactaaacatttatttttttattacgtattttctcat
acatacagtgctatcccaaaagtcccatacctccgccctctccctaccca
c
gaattcctctgatttgtagattggactagtaaaaataatttaacttaatg
gcatatatattagacttaaatgctcccaaaataaaactgcttacctgcaa
agaataaaacaaagtgcataatttttccatgtacccaataaactgaatcc
tgagtagttttaaaataaaatatcctttgttatttagaaattctatttct
ccctgtagctaggtccatattaagatgaaaaagagtagtagtatggataa
gtacacagtaacacttataaaaatctttaaatcagcacaaagcaaggtaa
gtctctatctttgcttaaagtaagtcatcaaaaatatatatgtggtataa
acgaaaactttctgtctggcaaatggcttttccacatatttttgctgtca
gttgttttctatggctacataaaaatatttttttctttgttaaagacatt
ttaccttttatttttttcaaaaaagttttattagatattttcttcattta
catttcaaatgctatcccaaaagtcccctatacccttcccccactctgct
ccccaacccattcttgttagttaatactagcaaatagtttctcatgttgt
ttagttactatactttcacaagaagatctaagaataattcagtcttgtat
gtagagttacagtttactaacatgacttctgtatgtagctgtggtttatt
tcaggtgttgcacactaataatttacatcaggattttcagagatttattt
tattatagatatagacttctaatgtcatgaggagtcggctttattattcc
ttgttcacaacttataactcattaaaatatgcatttctggggtgtggctg
cacatatctataacctaaacattctggagtcagatgaggagaattgccag
ctagagtcccatttgtgttaggtgtgagacatacagacagatgaacaaac
acataaatggagccatgattgttggattttgtatacatgcttctcatctt
ttatgatgagatattaattaacattcacttctttagtcttaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_85151019_85152082
seq2: B6Ng01-153L04.b_48_1098

seq1  GAATTCCAGCATTACTCTTGTGGAGAGCAAACACGAACCTAATGGTTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCATTACTCTTGTGGAGAGCAAACACGAACCTAATGGTTTGA  50

seq1  ATTTTCCCTTTGTGGGCTCTTCCTGCCAGTATGTTTAACAAATAGTTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCCTTTGTGGGCTCTTCCTGCCAGTATGTTTAACAAATAGTTGAA  100

seq1  TAAACCTGATGACCTTTATCATCTTTCTGTGTGTTAGAATTTCAAAACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTGATGACCTTTATCATCTTTCTGTGTGTTAGAATTTCAAAACAT  150

seq1  TGAGGAAACTTTGCAAACTTGATAGATACGGTGAGTTGATGCTTATTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAACTTTGCAAACTTGATAGATACGGTGAGTTGATGCTTATTCAA  200

seq1  ACTCTATAAGTATTGTAAAATGGAGGGAATACTAGTTTCTTTTCTTTATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTATAAGTATTGTAAAATGGAGGGAATACTAGTTTCTTTTCTTTATC  250

seq1  TGCACTCATATTGGTTTCTGATATCAGAGTACTAGGCAGTGGTACAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTCATATTGGTTTCTGATATCAGAGTACTAGGCAGTGGTACAAAAG  300

seq1  ACATTTTTTCTTAGTTCTCAGTCCACATTGGGATTATGTAGAGAGCTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTTCTTAGTTCTCAGTCCACATTGGGATTATGTAGAGAGCTTTT  350

seq1  AAACAAACCCATATTCTCAGTGGTACCAAAGGCACTGATCTAAGTATTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACCCATATTCTCAGTGGTACCAAAGGCACTGATCTAAGTATTAC  400

seq1  TATTCATAATAAAGTCCTTAGCAATCATTGCTTTCAATGGTCTCTTAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATAATAAAGTCCTTAGCAATCATTGCTTTCAATGGTCTCTTAGAG  450

seq1  GATTTTTCATCTATAAGGACATTAACAGTTTGTTTATAATTCTTTGAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTCATCTATAAGGACATTAACAGTTTGTTTATAATTCTTTGAGAT  500

seq1  TAAGAAGAGCCTTTCCTATTATGGGATGTATAGATACATCTGCTGCCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGAGCCTTTCCTATTATGGGATGTATAGATACATCTGCTGCCTCT  550

seq1  ACCCTCAAATCATAGTTGGCAGTGTTTTTATACAGTTGCCATAAGCAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCAAATCATAGTTGGCAGTGTTTTTATACAGTTGCCATAAGCAAAT  600

seq1  ATAGCATGAAATGATGCAAAATAAATCTGTGGCATATCTTATTTCCCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATGAAATGATGCAAAATAAATCTGTGGCATATCTTATTTCCCTAA  650

seq1  ATCACAGTTCTAATCACTATAGAGAATAATACAATTTGTTAAATAGAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGTTCTAATCACTATAGAGAATAATACAATTTGTTAAATAGAAAT  700

seq1  TATGTCCTTAGATCATGGAGAAGAGCAAAACCAGTAACCTGGAATTACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCTTAGATCATGGAGAAGAGCAAAACCAGTAACCTGGAATTACTG  750

seq1  AGTGAGAGTGTAAGAACTGAAGCTGCCACGTAGTGCAACTTATGCATTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGAGTGTAAGAACTGAAGCTGCCACGTAGTGCAACTTATGCATTTG  800

seq1  TCCTATGTGTCAATGTGTCAATAGAATTCTCTTATGAAAGAAAAAAATGA  850
      ||||||||||| |||||||||||||||||||||||||||| |||||||||
seq2  TCCTATGTGTC-ATGTGTCAATAGAATTCTCTTATGAAAG-AAAAAATGA  848

seq1  TTAAGAATTCACAACTCCA-TTTCTTCCAAAGTAATCATCAAAATTAAGA  899
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTAAGAATTCACAACTCCATTTTCTTCCAAAGTAATCATCAAAATTAAGA  898

seq1  ATGAATAGAATTTTACTAGACAGCATAATAGCCTTCAGA-TATGTCTATG  948
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATGAATAGAATTTTACTAGACAGCATAATAGCCTTCAGATTATGTCTATG  948

seq1  TTCTCACTCCCACAATAACTAAACATTTTATTTTTTTTATTACGTATTTT  998
      |||||||||||||||| |||||||||||   |||||||||||||||||||
seq2  TTCTCACTCCCACAAT-ACTAAACATTT--ATTTTTTTATTACGTATTTT  995

seq1  CCTCAATTACAATTACAGTGCTATCCCAAAAGTCCCCCATACCCTCCGCC  1048
       ||||  ||||  ||||||||||||||||||||  |||||| ||||||||
seq2  -CTCA--TACA--TACAGTGCTATCCCAAAAGT--CCCATA-CCTCCGCC  1037

seq1  CCACTC-CCCTACCCAC  1064
         ||| ||||||||||
seq2  ---CTCTCCCTACCCAC  1051

seq1: chrX_85283178_85284225
seq2: B6Ng01-153L04.g_69_1113 (reverse)

seq1  TTTTAAAGACTAAAGAAGTG-ATG-TAATTAATATCTCATCAATAAAAGA  48
      |||| ||||||||||||||| ||| |||||||||||||||| ||||||||
seq2  TTTTTAAGACTAAAGAAGTGAATGTTAATTAATATCTCATC-ATAAAAGA  49

seq1  TGAGAAGCATGTATACAATACTCCAACAATCATGGCTTCCATTTATGTGT  98
      |||||||||||||||||| | ||||||||||||||| |||||||||||||
seq2  TGAGAAGCATGTATACAA-AATCCAACAATCATGGC-TCCATTTATGTGT  97

seq1  TTTGTTTCATCTGTCTGTATGTCTCACACCTAACACAAATGGGACTCTAG  148
      ||   |||||||||||||||||||||||||||||||||||||||||||||
seq2  TT--GTTCATCTGTCTGTATGTCTCACACCTAACACAAATGGGACTCTAG  145

seq1  CTGGCAATTCTCCTCATCTGACTCCAGAATGTTTAGGTTATAGATATGTG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAATTCTCCTCATCTGACTCCAGAATGTTTAGGTTATAGATATGTG  195

seq1  CAGCCACACCCCAGAAATGCATATTTTAATGAGTTATAAGTTGTGAACAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCACACCCCAGAAATGCATATTTTAATGAGTTATAAGTTGTGAACAA  245

seq1  GGAATAATAAAGCCGACTCCTCATGACATTAGAAGTCTATATCTATAATA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAATAAAGCCGACTCCTCATGACATTAGAAGTCTATATCTATAATA  295

seq1  AAATAAATCTCTGAAAATCCTGATGTAAATTATTAGTGTGCAACACCTGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATCTCTGAAAATCCTGATGTAAATTATTAGTGTGCAACACCTGA  345

seq1  AATAAACCACAGCTACATACAGAAGTCATGTTAGTAAACTGTAACTCTAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACCACAGCTACATACAGAAGTCATGTTAGTAAACTGTAACTCTAC  395

seq1  ATACAAGACTGAATTATTCTTAGATCTTCTTGTGAAAGTATAGTAACTAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGACTGAATTATTCTTAGATCTTCTTGTGAAAGTATAGTAACTAA  445

seq1  ACAACATGAGAAACTATTTGCTAGTATTAACTAACAAGAATGGGTTGGGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATGAGAAACTATTTGCTAGTATTAACTAACAAGAATGGGTTGGGG  495

seq1  AGCAGAGTGGGGGAAGGGTATAGGGGACTTTTGGGATAGCATTTGAAATG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGTGGGGGAAGGGTATAGGGGACTTTTGGGATAGCATTTGAAATG  545

seq1  TAAATGAAGAAAATATCTAATAAAACTTTTTTGAAAAAAATAAAAGGTAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAAGAAAATATCTAATAAAACTTTTTTGAAAAAAATAAAAGGTAA  595

seq1  AATGTCTTTAACAAAGAAAAAAATATTTTTATGTAGCCATAGAAAACAAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTTTAACAAAGAAAAAAATATTTTTATGTAGCCATAGAAAACAAC  645

seq1  TGACAGCAAAAATATGTGGAAAAGCCATTTGCCAGACAGAAAGTTTTCGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGCAAAAATATGTGGAAAAGCCATTTGCCAGACAGAAAGTTTTCGT  695

seq1  TTATACCACATATATATTTTTGATGACTTACTTTAAGCAAAGATAGAGAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACCACATATATATTTTTGATGACTTACTTTAAGCAAAGATAGAGAC  745

seq1  TTACCTTGCTTTGTGCTGATTTAAAGATTTTTATAAGTGTTACTGTGTAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTGCTTTGTGCTGATTTAAAGATTTTTATAAGTGTTACTGTGTAC  795

seq1  TTATCCATACTACTACTCTTTTTCATCTTAATATGGACCTAGCTACAGGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCATACTACTACTCTTTTTCATCTTAATATGGACCTAGCTACAGGG  845

seq1  AGAAATAGAATTTCTAAATAACAAAGGATATTTTATTTTAAAACTACTCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAGAATTTCTAAATAACAAAGGATATTTTATTTTAAAACTACTCA  895

seq1  GGATTCAGTTTATTGGGTACATGGAAAAATTATGCACTTTGTTTTATTCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCAGTTTATTGGGTACATGGAAAAATTATGCACTTTGTTTTATTCT  945

seq1  TTGCAGGTAAGCAGTTTTATTTTGGGAGCATTTAAGTCTAATATATATGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGGTAAGCAGTTTTATTTTGGGAGCATTTAAGTCTAATATATATGC  995

seq1  CATTAAGTTAAATTATTTTTACTAGTCCAATCTACAAATCAGAGGAATTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGTTAAATTATTTTTACTAGTCCAATCTACAAATCAGAGGAATTC  1045