BAC Information

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BAC

Clone NameB6Ng01-155G08
ChromosomeX (Build37)17 (Build37)
Map Location 127,099,170 - 127,100,28956,883,396 - 56,883,606
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneDiap2, LOC100040092, LOC665773
Downstream geneLOC665799, LOC670449
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155G08.bB6Ng01-155G08.g
ACCDH950191DH950192
length1,107108
definitionDH950191|Mus musculus domesticus DNA, BAC clone: B6Ng01-155G08, 5' end.DH950192|Mus musculus domesticus DNA, BAC clone: B6Ng01-155G08, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(127,099,170 - 127,100,289)(56,883,396 - 56,883,606)
sequence
gaattctcacctgaggaatacttaatggctgagaagcacctgtattgtta
taagggtctccctcccctttctgctgagtctcagccccagtgtgaggaga
ggcctgagaaaggagggattaggattcaataatgactcagagtcagtagt
ggatgcaagctgtcagttcaggtactctctctgttccctgaagattccca
tcgttcttcttctccacttgttcttttctcttctcattcttttgttttct
cctttctcatgcttttgccttctcccaaacagagaccctgaacccagtct
tttattttccaagattacatcatcaaggctttgataattgttacacataa
attctataaatgcacaatcaatagtccctaccctcatttccttagatcaa
aaactaaacacaaagcaaaagcacatttcctcagaggtttccacagcctg
ttcttcacaggtagctgggtacagctcttgctatttcctggtacagcaga
cagcagtctttggtaacatttcatataagaacagaaaaaagacaggctac
taaaattaaaaagattccttacaaagttttttttttttctttttggagga
gggttcaagggtttctctgtatataaccctggctgttctggaactcactt
tgtagaccaggctggcctcgaactctgaaatccgcctgcctctgcctctg
gattgctgggattaaaggcgtgcgccaccatgcccggctcctttacaaag
ttttaaaatttatgttaagttaagcagttagctttgtctaatatcttttc
agggataatcatcttccaattcttcaaatagctcagagaacaaagtacga
acttttatatgcttctatatcatcctttacttttaatccttgtttcctca
ttctagcaattcaatagcctcatggactcctcctttaacactagttatcc
taaatcatacacacattaactattttcccttccataatttttcttcttga
aaccactttacaatcttaatgccccaagttcaccttgttaataatgagca
atcactggacagagtaacatgtgcctcctcttgatccaattcagccaagt
ctggcaa
caagatagccagggctatacagagaaaccctgtctcaaaaaaaaaagaaa
gaaagaaagaaagagagagagagagaaagagagagagagagaggagggga
ggggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_127099170_127100289
seq2: B6Ng01-155G08.b_48_1154

seq1  GAATTCTCACCTGAGGAATACTTAATGGCTGAGAAGCACCTGTATTGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACTTAATGGCTGAGAAGCACCTGTATTGTTA  50

seq1  TAAGGGTCTCCCTCCCCTTTCTGCTGAGTCTCAGCCCCAGTGTGAGGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGTCTCCCTCCCCTTTCTGCTGAGTCTCAGCCCCAGTGTGAGGAGA  100

seq1  GGCCTGAGAAAGGAGGGATTAGGATTCAATAATGACTCAGAGTCAGTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGAGAAAGGAGGGATTAGGATTCAATAATGACTCAGAGTCAGTAGT  150

seq1  GGATGCAAGCTGTCAGTTCAGGTACTCTCTCTGTTCCCTGAAGATTCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCAAGCTGTCAGTTCAGGTACTCTCTCTGTTCCCTGAAGATTCCCA  200

seq1  TCGTTCTTCTTCTCCACTTGTTCTTTTCTCTTCTCATTCTTTTGTTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTCTTCTTCTCCACTTGTTCTTTTCTCTTCTCATTCTTTTGTTTTCT  250

seq1  CCTTTCTCATGCTTTTGCCTTCTCCCAAACAGAGACCCTGAACCCAGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTCATGCTTTTGCCTTCTCCCAAACAGAGACCCTGAACCCAGTCT  300

seq1  TTTATTTTCCAAGATTACATCATCAAGGCTTTGATAATTGTTACACATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTCCAAGATTACATCATCAAGGCTTTGATAATTGTTACACATAA  350

seq1  ATTCTATAAATGCACAATCAATAGTCCCTACCCTCATTTCCTTAGATCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATAAATGCACAATCAATAGTCCCTACCCTCATTTCCTTAGATCAA  400

seq1  AAACTAAACACAAAGCAAAAGCACATTTCCTCAGAGGTTTCCACAGCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAACACAAAGCAAAAGCACATTTCCTCAGAGGTTTCCACAGCCTG  450

seq1  TTCTTCACAGGTAGCTGGGTACAGCTCTTGCTATTTCCTGGTACAGCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCACAGGTAGCTGGGTACAGCTCTTGCTATTTCCTGGTACAGCAGA  500

seq1  CAGCAGTCTTTGGTAACATTTCATATAAGAACAGAAAAAAGACAGGCTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTCTTTGGTAACATTTCATATAAGAACAGAAAAAAGACAGGCTAC  550

seq1  TAAAATTAAAAAGATTCCTTACAAAGTTTTTTTTTTTTCTTTTTGGAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTAAAAAGATTCCTTACAAAGTTTTTTTTTTTTCTTTTTGGAGGA  600

seq1  GGGTTCAAGGGTTTCTCTGTATATAACCCTGGCTGTTCTGGAACTCACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCAAGGGTTTCTCTGTATATAACCCTGGCTGTTCTGGAACTCACTT  650

seq1  TGTAGACCAGGCTGGCCTCGAACTCTGAAATCCGCCTGCCTCTGCCTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACCAGGCTGGCCTCGAACTCTGAAATCCGCCTGCCTCTGCCTCTG  700

seq1  GATTGCTGGGATTAAAGGCGTGCGCCACCATGCCCGGCTCC-TTACAAAG  749
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GATTGCTGGGATTAAAGGCGTGCGCCACCATGCCCGGCTCCTTTACAAAG  750

seq1  TTTTAAAATTTATGTTAAGTTAAAGCAGTTAGCTTTGTCTAATATCTTTT  799
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTTTAAAATTTATGTTAAGTT-AAGCAGTTAGCTTTGTCTAATATCTTTT  799

seq1  CAGGGATAATCATCTTCCAATTCTTCAAATAGCTCAGAGAACAAAGTACG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATAATCATCTTCCAATTCTTCAAATAGCTCAGAGAACAAAGTACG  849

seq1  AACTTTTTATATGCTTCTATATCATCCTTTACTTTTAATCTTTGTTTCCT  899
      ||| |||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAC-TTTTATATGCTTCTATATCATCCTTTACTTTTAATCCTTGTTTCCT  898

seq1  CATTCTAGCAATTCTATAGCCTCATGTACT-CTCCTTCTAACACTAGTTA  948
      |||||||||||||| ||||||||||| ||| |||||| ||||||||||||
seq2  CATTCTAGCAATTCAATAGCCTCATGGACTCCTCCTT-TAACACTAGTTA  947

seq1  TTCCTAAATCATACACACATT-ACTATTTTCCTATCCATAACTTTTCTTC  997
       |||||||||||||||||||| ||||||||||  ||||||| ||||||||
seq2  -TCCTAAATCATACACACATTAACTATTTTCCCTTCCATAATTTTTCTTC  996

seq1  TTGAGACCACTTTAACTATCTTTAATGTCCCCAAGTTCACCCTGGTTAAT  1047
      |||| |||||||| || ||| |||||| ||||||||||| ||| ||||| 
seq2  TTGAAACCACTTT-ACAATC-TTAATG-CCCCAAGTTCA-CCTTGTTAA-  1041

seq1  TAATGCAGCAATCACTGGACCAGAGTATACATGTGTCTCCTCATGATTTC  1097
      ||||| ||||||||||||| ||||||| ||||||| |||||| |||  ||
seq2  TAATG-AGCAATCACTGGA-CAGAGTA-ACATGTGCCTCCTCTTGA--TC  1086

seq1  AAATTCAAGGCCAAGTCTGGCAA  1120
       ||||||  ||||||||||||||
seq2  CAATTCA--GCCAAGTCTGGCAA  1107

seq1: chr17_56883396_56883606
seq2: B6Ng01-155G08.g_77_178 (reverse)

seq1  CCCTCCCTCCCTCCCTCTCTCTCTCTCTCTTTCTCTCTTTCTCTCTTTCT  50
                                                        
seq2  --------------------------------------------------  0

seq1  TTCTCTCTTTCTCTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  100
                                                        
seq2  --------------------------------------------------  0

seq1  CTTTCTTTCTCT-CTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  149
              | || | ||| | | |  ||| ||| ||| ||||||| ||| 
seq2  --------CCCTCCCCTCCCCTCC--TCTCTCTCTCTCTCTTTCTCTCTC  40

seq1  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCGAGACAGGGTTTCTCTGT  199
      ||| ||||||||||||||||||||| ||| | ||||||||||||||||||
seq2  TCTCTCTTTCTTTCTTTCTTTCTTTTTTTTTTGAGACAGGGTTTCTCTGT  90

seq1  GTAGCCCTGGCT  211
       |||||||||||
seq2  ATAGCCCTGGCT  102