BAC Information

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BAC

Clone NameB6Ng01-155N22
ChromosomeX (Build37)X (Build37)
Map Location 92,152,161 - 92,159,20792,153,030 - 92,153,465
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG668103, LOC100042041, AU015836, EG245516, LOC100042062, EG629591, Zfx, Eif2s3x, Klhl15, LOC385495, LOC670263, LOC100042098, LOC631145, 0610008C08Rik, EG668148, Maged1, LOC668150, EG385499, EG668156, Gspt2, LOC385500, Zxdb, LOC631331, EG631319, Zxda
Downstream geneGm371, 9630042H07Rik, Arhgef9, LOC619688, LOC100042189, 2810002O09Rik, Asb12, LOC668202, AK129302, A130028J20Rik, 1700010D01Rik, Las1l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155N22.bB6Ng01-155N22.g
ACCDH950528DH950529
length906430
definitionDH950528|Mus musculus domesticus DNA, BAC clone: B6Ng01-155N22, 5' end.DH950529|Mus musculus domesticus DNA, BAC clone: B6Ng01-155N22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(92,152,161 - 92,159,207)(92,153,030 - 92,153,465)
sequence
gaattcacctgcctctgcctcccaagtactaggattaaaggcctctgcca
ccactgcctgacaaccctaaaactcttaaacctcaaaaataaaacactaa
aattataaaaaaaaaaaacaacttaagaacactaaaaaaaacccaaaaaa
agttaaaccctagaagaaaccataaagcctaaaaaatttagcccccaaac
ctaacatacactaaaatcctttataaaaccggaaaaaacactaaatatac
actaagccctgaataccacaaaataccactaaaacactcttctaaaaacc
ataaaaaaccctttttaaaaacccctaggctgggcggtgatggcccacac
ctttaaaaccagcacttgggaggcagaggcaggcaaatttctgagttcaa
agccagcctggtctagacagtgagttccaggacagccggggctacacaga
gaaaccctgtctcaaaaaaaagaagaaaaaaataaagagcaagcaagaga
cacagaaagaaacagcctaaacttttaaaaataaatgcacaagaacccaa
aaatgaccctaaaacattatttattgaatttttctatttttttgaatttt
tcgagactgggtttctctatgtctatacctggctgtcctggaactcactc
tgtacaccgagctggcctcgaattcataaaatctcctgcctctgtctccc
aaggactgggatcagaggcatgggccactactgcctgacaccctaaaaca
ctcaaccccacaaataaaccctcaaatacagaaaaaaatgcatgaacact
tacaagaccctacctgaaacccagtcagatcctcaaaacaaacccgcata
gcctactaaaaaaagctctaaaccctaaaatactttcataacctagaaca
aaaacc
ctgagttgggggctagcctggtttacagagtgagtcccaggacagtctgg
aatatacacagagtgagtcccaggacagtcagggatatacacagagaaag
ccagtcaggagaaactcaaaaaaaaaaaaaaaaacccttaaaattttagg
gtcattttttggttcttatgtatttatttttagaattttaggtgtttttt
gtttgtttgtttgtttgattgatttttttcgagaaagtgtttctctgtgt
aaccctggctgtcctggaactcactctgtagaccaggctggcttcaaact
cagaaatttgcctgcctctgcccaccaagtgctggtattaaaggtgagtg
ccaccagcacccagcttaagggttttttaaacagggctttgtatggtttt
tagaagagtgttgtagtggggtttttgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_92152161_92159207
seq2: B6Ng01-155N22.b_47_952 (reverse)

seq1  GGTTTTTAAAGTATTTTAGTGTTTTAGGCTTTTTTTTAGGCTATCGGGTT  50
                                                        
seq2  --------------------------------------------------  0

seq1  TGTTTTTAGGGTTTTACTGGGTTTTCTTTTAGGGTCTTTTTAAGTGTTCT  100
                                                        
seq2  --------------------------------------------------  0

seq1  TGCATTTTTTTCTGTAATTTTAGGGTTTATTTTTGGGGTTTAAGAGTTTT  150
                                                        
seq2  --------------------------------------------------  0

seq1  AGGGTTGTCAGGCAGTAGTGGCCCATGCCTTTAATCCCAGTACTTGGGAG  200
                                                        
seq2  --------------------------------------------------  0

seq1  ACAGAGGCAGGAGATTTTCTGAGTTCGAGGCCAGCCTGGTGTACAGAGTG  250
                                                        
seq2  --------------------------------------------------  0

seq1  AGTTCCAGGACAGCCAGGTATAGACATAGAGAAACCCAGTCTCGAAAATT  300
                                                        
seq2  --------------------------------------------------  0

seq1  CAATAAATAATGTTTTAGGGTCATTTTTGGGTTCTTGTGCATTTATTTTT  350
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAGTTTAGGCTGTTTCTTTCTGTGTCTCTTGCTTGCTCTTTATTTTTT  400
                                                        
seq2  --------------------------------------------------  0

seq1  TCTTCTTTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCCGGCTGTCCTGG  450
                                                        
seq2  --------------------------------------------------  0

seq1  AACTCACTGTCTAGACCAGGCTGGCTTTGAACTCAGAAATTTGCCTGCCT  500
                                                        
seq2  --------------------------------------------------  0

seq1  CTGCCTCCCAAGTGCTGGTTTTAAAGGTGTGGGCCATCACCGCCCAGCTT  550
                                                        
seq2  --------------------------------------------------  0

seq1  AGGGGTTTTTAAAAAGGGTTTTTTATGGTTTTTAGAAGAGTGTTTTAGTG  600
                                                        
seq2  --------------------------------------------------  0

seq1  GTATTTTGTGGTATTCAGGGCTTAGTGTATATTTAGTGTTTTTTCCGGTT  650
                                                        
seq2  --------------------------------------------------  0

seq1  TTATAAAGGATTTTAGTGTATGTTAGGTTTGGGGGCTAAATTTTTTAGGC  700
                                                        
seq2  --------------------------------------------------  0

seq1  TTTATGGTTTCTTCTAGGGTTTAACTTTTTTTGGGTTTTTTTTAGTGTTC  750
                                                        
seq2  --------------------------------------------------  0

seq1  TTAAGTTGTTTTTTTTTTTATAATTTTAGTGTTTTATTTTTGAGGTTTAA  800
                                                        
seq2  --------------------------------------------------  0

seq1  GAGTTTTAGGGTTGTCAGGCAGTGGTGGCACAGGCCTTTAATCCTAGTAC  850
                                                        
seq2  --------------------------------------------------  0

seq1  TTGGGAGGCAGAGGCAGGTGAATTCCTGAGTTGGGGGCTAGCCTGGTTTA  900
                                                        
seq2  --------------------------------------------------  0

seq1  CAGAGTGAGTCCCAGGACAGTCTGGAATATACACAGAGTGAGTCCCAGGA  950
                                                        
seq2  --------------------------------------------------  0

seq1  CAGTCAGGGATATACACAGAGAAAGCCAGTCAGGAGAAACTCAAAAAAAA  1000
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAAAAAACCCTTAAAATTTTAGGGTCATTTTTTGGTTCTTATGTATTT  1050
                                                        
seq2  --------------------------------------------------  0

seq1  ATTTTTAGAATTTTAGGTGTTTTTTGTTTGTTTGTTTGTTTGATTGATTT  1100
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTCGAGAAAGTGTTTCTCTGTGTAACCCTGGCTGTCCTGGAACTCACT  1150
                                                        
seq2  --------------------------------------------------  0

seq1  CTGTAGACCAGGCTGGCTTCAAACTCAGAAATTTGCCTGCCTCTGCCCAC  1200
                                                        
seq2  --------------------------------------------------  0

seq1  CAAGTGCTGGTATTAAAGGTGAGTGCCACCAGCACCCAGCTTAAGGGTTT  1250
                                                        
seq2  --------------------------------------------------  0

seq1  TTTAAACAGGGCTTTGTATGGTTTTTAGAAGAGTGTTGTAGTGGGGTTTT  1300
                                                        
seq2  --------------------------------------------------  0

seq1  TGTGTTTGGCTTTCACATTTAAGTGTATATTTAATATTTTTTTTTCTGGG  1350
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTTAAAGGATTTTAGCATGTGTTAGGGTTTGGGGCTTATTTTTAGGCC  1400
                                                        
seq2  --------------------------------------------------  0

seq1  TTGGGTTTTTTTTCTTTTAGGGTTTTACTGTTATTTTATAGGATCTTTTC  1450
                                                        
seq2  --------------------------------------------------  0

seq1  TAGTGTGCTTGAGTTTTTTCTTTTAAATTTTAGGGTTTTATTTTTGGGGT  1500
                                                        
seq2  --------------------------------------------------  0

seq1  TTAAGAGTTTTAGGGTTGTCAAGCAGTGGTGGCCCATGCCTTTAATCCCA  1550
                                                        
seq2  --------------------------------------------------  0

seq1  GTACTTGGAAGAGAGAGGCAGGAGATTTTCTGAGTTCGACGCCAGCCCGG  1600
                                                        
seq2  --------------------------------------------------  0

seq1  TCTACAGAGTGAGTTCTAGGATAGTCAGGGTTGTACACAGAGAAACCCAG  1650
                                                        
seq2  --------------------------------------------------  0

seq1  TCTCAAAAAACCAACACAAACAAACAAACAAAAGTTTTAGGGTCATTTTA  1700
                                                        
seq2  --------------------------------------------------  0

seq1  GGGTTCTTGTGCATTTATTTTTAGAATTTTAGGCTTTCTTCTCTCTTACT  1750
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTCTCTCTCTCTTTCTCCCTCTGTTTTTTTATTTATTCATTTTTTTTT  1800
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTTTGGTCTTTTCTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCC  1850
                                                        
seq2  --------------------------------------------------  0

seq1  TGGACCTCAGTCTGTAGACCAGGCTGGCCTGGAACTCAGTAATCTGCTTG  1900
                                                        
seq2  --------------------------------------------------  0

seq1  CCTCTGCCTCCCAAGTGCTGGTATTAAACCCCTGTGCCACCACTGCCTGG  1950
                                                        
seq2  --------------------------------------------------  0

seq1  CTAAGCGTTTTTTAAAAAGGGTTTTTTATGGTTTTTAGTAGTGTTTTCCT  2000
                                                        
seq2  --------------------------------------------------  0

seq1  GTTTTTTCCGTTTTCATGGTTTTAGTGTATATTTAGTGTTTTTTTTCTTG  2050
                                                        
seq2  --------------------------------------------------  0

seq1  GTTTTTAAAGTATTTTAGTGTTTTAGGCTTTTTTTTAGGCTATCGGGTTT  2100
                                                        
seq2  --------------------------------------------------  0

seq1  GTTTTTAGGGTTTTACTGGGTTTTCTTTTAGGGTCTTTTTAAGTGTTCTT  2150
                                                        
seq2  --------------------------------------------------  0

seq1  GCATTTTTTTCTGTAATTTTAGGGTTTATTTTTGGGGTTGAAGAGTTTTA  2200
                                                        
seq2  --------------------------------------------------  0

seq1  GGGTTGTCAGGCAGTAGTGGCCCATGCCTTTAATCCCAGTACTTGGGAGA  2250
                                                        
seq2  --------------------------------------------------  0

seq1  CAGAGGCAGGAGATTTTCTGAGTTCGAGGCCAGCCTGGTATACAGAGTGA  2300
                                                        
seq2  --------------------------------------------------  0

seq1  GTTCCAGGACAGCCAGGTATAGACATAGAGAAACCCAGTCTCGAAAATTC  2350
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAAAATAATGTTTTAGGGTCATTTTTGGGTTCTTATGCATTTATTTTT  2400
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAGTTTAGGCTGTTTCTTTCTGTGTCTCTTGCTTGCTCTTTATTTTTT  2450
                                                        
seq2  --------------------------------------------------  0

seq1  TCTTCTTTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGG  2500
                                                        
seq2  --------------------------------------------------  0

seq1  AACTCACTGTCTAGACCAGGCTGGCTTTGAACTCAGAAATTTGCCTGCCT  2550
                                                        
seq2  --------------------------------------------------  0

seq1  CTGCCTCCCAAGTGCTGGTTTTAAAGGTGTGGGCCATCACCGCCCAGCTT  2600
                                                        
seq2  --------------------------------------------------  0

seq1  AGGGGTTTTTAAAAAGGGTTTTTTATGGTTTTTAGAAGAGTGTTTTAGTA  2650
                                                        
seq2  --------------------------------------------------  0

seq1  GTATTTTGTGGTATTCAGGGCTTAGTGTATATTTAGTGTTTTTTTCCGGT  2700
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTTAAAGGATTTTAGTGTATGTTAGGTTTGGGGGCTAAATTTTTTAGG  2750
                                                        
seq2  --------------------------------------------------  0

seq1  CTTTATGGTTTCTTTTAGGGTTTAACTTTTTTTGGGTTTTTTTTAGTGTT  2800
                                                        
seq2  --------------------------------------------------  0

seq1  CTTGAGTTGTTTTTTTTTTTTTTTTTTATAATTTTAGTGTTTTATTTTTG  2850
                                                        
seq2  --------------------------------------------------  0

seq1  AGGTTTAAGAGTTTTAGGGTTGTCAGGCAGTGGTGGCAGAGGCCTTTATT  2900
                                                        
seq2  --------------------------------------------------  0

seq1  CCTAGTACTTGGGAGGCAGAGGCAGGTGAATTCCTGAGTTGGGGGCTAGC  2950
                                                        
seq2  --------------------------------------------------  0

seq1  CTGGTTTACAGAGTGAGTCCCAGGACAGTCTGGAATATACACAGAGTGAG  3000
                                                        
seq2  --------------------------------------------------  0

seq1  TCCCAGGACAGTCAGGGATATACACAGAGAAAGCCAGTCAGGAGAAACTC  3050
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAAAAAAAAGCCTTAAAATTTTAGGGTCATTTTTTGGTTCTTATGTAT  3100
                                                        
seq2  --------------------------------------------------  0

seq1  TTATTTTTAGAATTTTAGGTGTTTTTTGTTTGTTTGTTTGATTGATTGAT  3150
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTTTCGAGAAAGTGTTTCTCTGTGTAACCCTGGCTGTCCTGGAATTCA  3200
                                                        
seq2  --------------------------------------------------  0

seq1  CTCTGTAGACCAGGCTGGCTTCAAACTCAGAAATTTGCCTGCCTCTGCCC  3250
                                                        
seq2  --------------------------------------------------  0

seq1  ACCAAGTGCTGGTATTAAAGGTGAGTGCCACCAGCGCCCAGCTTAAGGGT  3300
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTTAAACAGGGCTTTGTATGGTTTTTAGAAGAGTGTTGTAGTGGGGTT  3350
                                                        
seq2  --------------------------------------------------  0

seq1  TTTGTGTTTGGCTTTCACGTTTAAGTGTATATTTAGTATTTTTTTTCTGG  3400
                                                        
seq2  --------------------------------------------------  0

seq1  GTTTTTAAAGGATTTTAGCATGTGTTAGGGTTTGGCGCTCATTTTTAGGC  3450
                                                        
seq2  --------------------------------------------------  0

seq1  CTTGGGTTTTTTTTCTTTTAGGGTTTTACTGTTATTTTATAGGATCTTTT  3500
                                                        
seq2  --------------------------------------------------  0

seq1  CTAGTGTGCTTGAGTTTTTTCTTTTAAATTTTAGGGTTTTATTTTTGGGG  3550
                                                        
seq2  --------------------------------------------------  0

seq1  TTTAAGAGTTTTAGGGTTGTCAAGCAGTGGTGGCCCATGCCTTTAATCCC  3600
                                                        
seq2  --------------------------------------------------  0

seq1  AGTACTTGGAAGAGAGAGGCAGGAGATTTTCTGAGTTCGAGGCCAGCCCG  3650
                                                        
seq2  --------------------------------------------------  0

seq1  GTCTACAGAGTGAGTTCTAGGATAGTCAGGGTTGTACACAGAGAAACCCA  3700
                                                        
seq2  --------------------------------------------------  0

seq1  GTCTCAAAAAACCAACACAAACAAACAAACAAAAGTTTTAGGGTCATTTT  3750
                                                        
seq2  --------------------------------------------------  0

seq1  AGGGTTCTTGTGCATTTATTTTTAGAATTTTAGGCTTTCTTCTCTCTTAC  3800
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTTCTCTCTCTCTTTCTCCCTCTGTTTTTTTATTTATTCATTTTTTTT  3850
                                                        
seq2  --------------------------------------------------  0

seq1  TTTGTGGTCTTTTCTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCT  3900
                                                        
seq2  --------------------------------------------------  0

seq1  GGACCTCAGTCTGTAGACCAGGCTGGCCTGGAACTCAGTAATCTGCTTGC  3950
                                                        
seq2  --------------------------------------------------  0

seq1  CTCTGCCTCCCAAGTGCTGGTATTAAACCCCTGTGCCACCACTGCCTGGC  4000
                                                        
seq2  --------------------------------------------------  0

seq1  TAAGCGTTTTTTAAAAAGGGTTTTTTATGGTTTTTAGTAGTGTTTTCCTG  4050
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTTTCCGTTTTCATGGTTTTAGTGTATATTTAGTGTTTTTTTTCTTGG  4100
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTTAAAGTATTTTAGTGTTTTAGGCTTTTTTTTAGGCTATCGGGTTTG  4150
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTTAGGGTTTTACTGGGTTTTCTTTTAGGGTCTTTTTAAGTGTTCTTG  4200
                                                        
seq2  --------------------------------------------------  0

seq1  CATTTTTTTCTGTAATTTTAGGGTTTATTTTTGGGGTTGAAGAGTTTTAG  4250
                                                        
seq2  --------------------------------------------------  0

seq1  GGTTGTCAGGCAGTAGTGGCCCATGCCTTTAATCCCAGTACTTGGGAGAC  4300
                                                        
seq2  --------------------------------------------------  0

seq1  AGAGGCAGGAGATTTTCTGAGTTCGAGGCCAGCCTGGTATACAGAGTGAG  4350
                                                        
seq2  --------------------------------------------------  0

seq1  TTCCAGGACAGCCAGGTATAGACATAGAGAAACCCAGTCTCGAAAATTCA  4400
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAAATAATGTTTTAGGGTCATTTTTGGGTTCTTATGCATTTATTTTTA  4450
                                                        
seq2  --------------------------------------------------  0

seq1  AAAGTTTAGGCTGTTTCTTTCTGTGTCTCTTGCTTGCTCTTTATTTTTTT  4500
                                                        
seq2  --------------------------------------------------  0

seq1  CTTCTTTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGA  4550
                                                        
seq2  --------------------------------------------------  0

seq1  ACTCACTGTCTAGACCAGGCTGGCTTTGAACTCAGAAATTTGCCTGCCTC  4600
                                                        
seq2  --------------------------------------------------  0

seq1  TGCCTCCCAAGTGCTGGTTTTAAAGGTGTGGGCCATCACCGCCCAGCTTA  4650
                                                        
seq2  --------------------------------------------------  0

seq1  GGGGTTTTTAAAAAGGGTTTTTTATGGTTTTTAGAAGAGTGTTTTAGTAG  4700
                                                        
seq2  --------------------------------------------------  0

seq1  TATTTTGTGGTATTCAGGGCTTAGTGTATATTTAGTGTTTTTTCCGGTTT  4750
                                                        
seq2  --------------------------------------------------  0

seq1  TTTAAAGGATTTTAGTGTATGTTAGGTTTGGGGGCTAAATTTTTTAGGCT  4800
                                                        
seq2  --------------------------------------------------  0

seq1  TTATGGTTTCTTTTAGGGTTTAACTTTTTTTGGGTTTTTTTTAGTGTTCT  4850
                                                        
seq2  --------------------------------------------------  0

seq1  TGAGTTGTTTTTTTTTTTTTTTTATAATTTTAGTGTTTTATTTTTGAGGT  4900
                                                        
seq2  --------------------------------------------------  0

seq1  TTAAGAGTTTTAGGGTTGTCAGGCAGTGGTGGCACAGGCCTTTAATCCTA  4950
                                                        
seq2  --------------------------------------------------  0

seq1  GTACTTGGGAGGCAGAGGCAGGTGAATTCCTGAGTTGGGGGCTAGCCTGG  5000
                                                        
seq2  --------------------------------------------------  0

seq1  TTTACAGAGTGAGTCCCAGGACAGTCTGGAATATACACAGAGTGAGTCCC  5050
                                                        
seq2  --------------------------------------------------  0

seq1  AGGACAGTCAGGGATATACACAGAGAAAGCCAGTCAGGAGAAACTCAAAA  5100
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAAAACAGCCTTAAAATTTTAGGGTCATTTTTTGGTTCTTATGTATTT  5150
                                                        
seq2  --------------------------------------------------  0

seq1  ATTTTTAGAATTTTAGGTGTTTTTTGTTTGTTTGTTTGATTGATTGATTT  5200
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTCGAGAAAGTGTTTCTCTGTGTAACCCTGGCTGTCCTGGAACTCACT  5250
                                                        
seq2  --------------------------------------------------  0

seq1  CTGTAGACCAGGCTGGCTTCAAACTCAGAAATTTGCCTGCCTCTGCCCAC  5300
                                                        
seq2  --------------------------------------------------  0

seq1  CAAGTGCTGGTATTAAAGGTGAGTGCCACCAGCACCCAGCTTAAGGGTTT  5350
                                                        
seq2  --------------------------------------------------  0

seq1  TTTAAACAGGGCTTTGTATGGTTTTTAGAAGAGTGTTGTAGTGGGGTTTT  5400
                                                        
seq2  --------------------------------------------------  0

seq1  TGTGTTTGGCTTTCACGTTTAAGTGTATATTTAGTATTTTTTTTTCTGGG  5450
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTTAAAGGATTTTAGCATGTGTTAGGGTTTGGGGCTCATTTATACGCC  5500
                                                        
seq2  --------------------------------------------------  0

seq1  TTGGGTTTTTTTTCTTTTAGGGTTTTACTGTTATTTTATAGGATCTTTTC  5550
                                                        
seq2  --------------------------------------------------  0

seq1  TAGTGTGCTTGAGTTTTTTCTTTTAAATTTTAGGGTTTTATTTTTGGGGT  5600
                                                        
seq2  --------------------------------------------------  0

seq1  TTAAGAGTTTTAGGGTTGTCAAGCAGTGGTGGCCCATGCCTTTAATCCCA  5650
                                                        
seq2  --------------------------------------------------  0

seq1  GTACTTGGAAGAGAGAGGCAGGAGATTTTCTGAGTTCGAGGCCAGCCCGG  5700
                                                        
seq2  --------------------------------------------------  0

seq1  TCTACAGAGTGAGTTCTAGGATAGTCAGGGTTGTACACAGAGAAACCCAG  5750
                                                        
seq2  --------------------------------------------------  0

seq1  TCTCAAAAAACCAACACAAACAAACAAACAAAAGTTTTAGGGTCATTTTA  5800
                                                        
seq2  --------------------------------------------------  0

seq1  GGGTTCTTGTGCATTTATATTTAGAATTTTAGGCTTTCTTCTCTCTTACT  5850
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTCTCTCTCTCTTTCTCCCTCTGTTTTTTTATTTATTCTTTTTTTTTT  5900
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTTGGTCTTTTCTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCT  5950
                                                        
seq2  --------------------------------------------------  0

seq1  GGACCTCAGTCTGTAGACCAGGCTGGCCTGGAACTCAGTAATCTGCTTGC  6000
                                                        
seq2  --------------------------------------------------  0

seq1  CTCTGCCTCCCAAGTGCTGGTATTAAACCCCTGTGCCACCACTGCCTGGC  6050
                                                        
seq2  --------------------------------------------------  0

seq1  TAAGCGTTTTTTAAAAAGGGTTTTTTATGGTTTTTAGTAGTGTTTTCCTG  6100
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTTTCCGTTTTCATGGTTTTAGTGTATATTTAGTGTTTTTATTCTTGG  6150
                                          |||||| |||| ||
seq2  -----------------------------------GGTTTTTGTTCTAGG  15

seq1  TTTTTAAAGTATTTTAGTGTTTTAGGCTTTTTTT-TTAGGCTAT-CGGGT  6198
      || | |||||||||||| ||||   |||||||||  |||||||| |||||
seq2  TTATGAAAGTATTTTAGGGTTTAGAGCTTTTTTTAGTAGGCTATGCGGGT  65

seq1  TTGTTTTTAGGGTTTTACTGGGTTTTCTTTTAGGGTCTTTTTAAGTGTTC  6248
      ||||||| ||| | | |||||| ||||   ||||||| || |||||||||
seq2  TTGTTTTGAGGATCTGACTGGG-TTTCAGGTAGGGTC-TTGTAAGTGTTC  113

seq1  TTGCATTTTTTTCTGTAATTTTAGGGTTTATTTTTGGGGTTTAAGAGTTT  6298
       ||||||||||||||| |||| ||||||||||| ||||| || || ||||
seq2  ATGCATTTTTTTCTGT-ATTTGAGGGTTTATTTGTGGGG-TTGAGTGTTT  161

seq1  TAGGGTTGTCAGGCAGTAGTGGCCCATGCCTTTAATCCCAGTACTTGGGA  6348
      ||||| ||||||||||||||||||||||||| | |||||||| |||||||
seq2  TAGGG-TGTCAGGCAGTAGTGGCCCATGCCTCTGATCCCAGTCCTTGGGA  210

seq1  GACAGAGGCAGGAGATTTTCTGAGTTCGAGGCCAGCCCGGTCTACAGAGT  6398
      ||||||||||||||||||| ||| |||||||||||| |||| ||||||||
seq2  GACAGAGGCAGGAGATTTTATGAATTCGAGGCCAGCTCGGTGTACAGAGT  260

seq1  GAGTTCCAGGACAGCCAGGTATAGACATAGAGAAACCCAGTCTCGAAAAA  6448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCAGGACAGCCAGGTATAGACATAGAGAAACCCAGTCTCGAAAAA  310

seq1  TTCAAAAAAATAGAAAAATTCAATAAATAATGTTTTAGGGTCATTTTTGG  6498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAAAATAGAAAAATTCAATAAATAATGTTTTAGGGTCATTTTTGG  360

seq1  GTTCTTGTGCATTTATTTTTAAAAGTTTAGGCTGTTTCTTTCTGTGTCTC  6548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGTGCATTTATTTTTAAAAGTTTAGGCTGTTTCTTTCTGTGTCTC  410

seq1  TTGCTTGCTCTTTATTTTTTTCTTCTTTTTTTTGAGACAGGGTTTCTCTG  6598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGCTCTTTATTTTTTTCTTCTTTTTTTTGAGACAGGGTTTCTCTG  460

seq1  TGTAGCCCCGGCTGTCCTGGAACTCACTGTCTAGACCAGGCTGGCTTTGA  6648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCCCGGCTGTCCTGGAACTCACTGTCTAGACCAGGCTGGCTTTGA  510

seq1  ACTCAGAAATTTGCCTGCCTCTGCCTCCCAAGTGCTGGTTTTAAAGGTGT  6698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAAATTTGCCTGCCTCTGCCTCCCAAGTGCTGGTTTTAAAGGTGT  560

seq1  GGGCCATCACCGCCCAGCTTAGGGGTTTTTAAAAAGGGTTTTTTATGGTT  6748
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGGCCATCACCGCCCAGCCTAGGGGTTTTTAAAAAGGGTTTTTTATGGTT  610

seq1  TTTAGAAGAGTGTTTTAGTGGTATTTTGTGGTATTCAGGGCTTAGTGTAT  6798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAGAGTGTTTTAGTGGTATTTTGTGGTATTCAGGGCTTAGTGTAT  660

seq1  ATTTAGTGTTTTTTCCGGTTTTATAAAGGATTTTAGTGTATGTTAGGTTT  6848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTGTTTTTTCCGGTTTTATAAAGGATTTTAGTGTATGTTAGGTTT  710

seq1  GGGGGCTAAAGTTTTTAGGCTTTATGGTTTCTTCTAGGGTTTAACTTTTT  6898
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCTAAATTTTTTAGGCTTTATGGTTTCTTCTAGGGTTTAACTTTTT  760

seq1  TTGGGTTTTTTTTAGTGTTCTTAAGTTGTTTTTTTTTTTTTTTATAATTT  6948
      ||||||||||||||||||||||||||||   |||||||||||||||||||
seq2  TTGGGTTTTTTTTAGTGTTCTTAAGTTG---TTTTTTTTTTTTATAATTT  807

seq1  TAGTGTTTTATTTTTGAGGTTTAAGAGTTTTAGGGTTGTCAGGCAGTGGT  6998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTTTATTTTTGAGGTTTAAGAGTTTTAGGGTTGTCAGGCAGTGGT  857

seq1  GGCAGAGGCCTTTAATCCTAGTACTTGGGAGGCAGAGGCAGGTGAATTC  7047
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGCCTTTAATCCTAGTACTTGGGAGGCAGAGGCAGGTGAATTC  906

seq1: chrX_92153030_92153465
seq2: B6Ng01-155N22.g_70_505

seq1  GAATTCCTGAGTTGGGGGCTAGCCTGGTTTACAGAGTGAGTCCCAGGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAGTTGGGGGCTAGCCTGGTTTACAGAGTGAGTCCCAGGACA  50

seq1  GTCTGGAATATACACAGAGTGAGTCCCAGGACAGTCAGGGATATACACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGAATATACACAGAGTGAGTCCCAGGACAGTCAGGGATATACACAG  100

seq1  AGAAAGCCAGTCAGGAGAAACTCAAAAAAAAAAAAAAAAACCCTTAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCCAGTCAGGAGAAACTCAAAAAAAAAAAAAAAAACCCTTAAAAT  150

seq1  TTTAGGGTCATTTTTTGGTTCTTATGTATTTATTTTTAGAATTTTAGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGGTCATTTTTTGGTTCTTATGTATTTATTTTTAGAATTTTAGGTG  200

seq1  TTTTTTGTTTGTTTGTTTGTTTGATTGATTTTTTTCGAGAAAGTGTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTTTGTTTGTTTGTTTGATTGATTTTTTTCGAGAAAGTGTTTCT  250

seq1  CTGTGTAACCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTAACCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCTT  300

seq1  CAAACTCAGAAATTTGCCTGCCTCTGCCCACCAAGTGCTGGTATTAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCAGAAATTTGCCTGCCTCTGCCCACCAAGTGCTGGTATTAAAGG  350

seq1  TGAGTGCCACCAGCACCCAGCTTAAGGGTTTTTTAAACAGGGCTTTGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGCCACCAGCACCCAGCTTAAGGGTTTTTTAAACAGGGCTTTGTAT  400

seq1  GGTTTTTAGAAGAGTGTTGTAGTGGGGTTTTTGTGT  436
      ||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTAGAAGAGTGTTGTAGTGGGGTTTTTGTGT  436