MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-156G18
Chromosome	X (Build37)
Map Location	61,220,946 - 61,221,461
singlet/doublet	singlet
Overlap gene	none
Upstream gene	EG627420
Downstream gene	LOC666729, EG627470, 3830417A13Rik, Slitrk4, LOC100040011
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG627420 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627420 MGI:3645755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC666729 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666729
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	EG627470 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627470 MGI:3643199
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	3830417A13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70696 MGI:1917946
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slitrk4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245446 MGI:2442509
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040011 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040011
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	EG627420 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271657 GeneID:627420 MGI:3645755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG627420 transcript_id : XM_892078.2

name	EG627470 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407498 GeneID:627470 MGI:3643199
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : predicted gene, EG627470 transcript_id : XM_899948.2

name	3830417A13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037214 GeneID:70696 MGI:1917946
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3830417A13 gene transcript_id : NM_027512.1

name	Slitrk4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357201 GeneID:245446 MGI:2442509
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SLIT and NTRK-like family, member 4 transcript_id : NM_178740.4

name	EG627420 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271658 GeneID:627420 MGI:3645755
definition	codon_start : 1 product : hypothetical protein protein_id : XP_897171.2

name	EG627470 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83001436 GeneID:627470 MGI:3643199
definition	codon_start : 1 product : similar to SPANX-N protein_id : XP_905041.1

name	3830417A13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037215 CCDS:CCDS30166.1 GeneID:70696 MGI:1917946
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC70696 protein_id : NP_081788.1

name	Slitrk4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982342 CCDS:CCDS30167.1 GeneID:245446 MGI:2442509
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007409 - axonogenesis [Evidence IDA] codon_start : 1 note : slit and trk like gene 4 product : SLIT and NTRK-like family, member 4 protein_id : NP_848855.2

name	LOC666729 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666729
definition	number : 2 pseudo : _no_value

name	LOC666729 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666729
definition	number : 1 pseudo : _no_value

name	LOC100040011 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040011
definition	number : 1 pseudo : _no_value

name	LOC100040011 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040011
definition	number : 2 pseudo : _no_value

name	LOC100040011 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040011
definition	number : 3 pseudo : _no_value

clone name	MSMg01-487N13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-343I02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-235O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538I09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-186N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093H22
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-156G18.b	B6Ng01-156G18.g
ACC	DH950930	DH950931
length	1,084	884
definition	DH950930\|Mus musculus domesticus DNA, BAC clone: B6Ng01-156G18, 5' end.	DH950931\|Mus musculus domesticus DNA, BAC clone: B6Ng01-156G18, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaaatgtaatagaccacgctgtttggcaggagaaatttgaagaca atataatatgcagggagtggcacgactattgtataccttattttctcccc agatttacaacaagagacagaaagcatagcagaaagatgtgttatcgttg tatgttgttgagaaaagggatgtgaactctatcaaaaacgtaaatggaat tgtttagtgtggtgaagaatggagttttaatttgaagacatgacaggttc agaaaaagtataattgctaaagatattagcaaaattaacaagacacatca ggtgtcatgagagaaagaccccactcatcaagagcgatagaatagaatag tgcagattcatttgaaagaagactgagaagatagggccttcaggacacct tgctggaaagtggctattcgagtaagtttcttctgaggttgagcttagga tctagcacatgaaagctcttccagtcatgtaggcccctaggtttgaacac ttggtccccagctaggggtgctgttttgggaggtataaaacctttaagga cagaggtcttgggtgaagcagatgggtaccttgagatgtatagcctgtac tagtgttcagtgccaactttgatgagatgtgggcatgaggctgccagaaa gttcctgcccctgtagagtggcctgtctgtgtgtataattcagcatcaca gagtgtacttccttaaactgtgagctaaaataaacctctcttcccttaag tcccttattaagcatttgctcacaacgatgcgaaaagcagctaatacaat ctcctctctgtgtgtaatggggctggttagcctttcaaggagcctagaca ttaagaaggagacttctgtctcaggaaattaggcaacataattccataat aaattaatctataggaaatagtttgtttgtaatgaaagttaatgtccatg ctagcttgctagcaaggcctccttgttttctaatttacattagaatacat tgcaaccttgggaaacttaaaagctaaattgtctttcgtcaatttcctcg agttcctaaactcctcaggtctggtgcatctcta	gaattctgtttagatctgtaccccattttaattgggttcttttcttaata tctaattttatgagttcttaataaaatttgatattagccttctatcatat atgtagttggtaaaagtctgtcatattctgcacgctgccagtttatctgg atgatgatgtcctttgccctgcagaagcttttcagtttcatgaggtccca tttattaattgctgttcttagtgcccatgttaatggtgtttttttttttt tttttcagaaagccttttatggtgccaatgagttcagggctattcaaaca ctttctcttatctagtttagagtacctggtgttatgttgatctatttgga gttgttttgtgcagggtagtaaatatagacctattttcattcttctacat gcagccatccagtttgagcagcaccatttgttgaagatgctgtgtttctt ctggtatgaatttcaggcttctttattaaaaaacaaatgtgttcataggt ttgtgggtttatgcttggatctttttttttttattattttttctcatatt tttattagatattttcttcatttacattaaaaaatgctatcctgaaagtc ccctataccctcccccaaccctgttcccctacccacccactcccacttct tggccctggcgttcccctgtactagggcatataacgtttgcaagaccaag gagcctctcttcccaacgatggccgactaggccatcttctgctacatatg cagctagagacacaagctctgggggtacaggtttgttcatattgttgttc cacctatagggttgcagaccctttcagctccttgggtactttctctagct cctccattgggggcctgtgttccatccatagatg
quality values	Open. Hide. 47 41 28 29 61 38 31 53 61 42 43 50 61 61 61 61 61 61 61 47 47 61 61 61 49 50 37 37 43 43 16 27 21 32 61 61 61 61 61 61 49 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 59 59 59 59 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 55 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 53 52 61 61 61 61 53 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 43 61 43 52 52 61 61 61 61 47 61 61 61 61 61 61 47 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 53 61 53 50 61 34 61 61 61 53 61 47 61 61 53 61 61 61 61 50 61 50 52 61 61 53 53 53 53 57 50 53 53 53 53 53 57 57 50 57 53 50 53 53 57 45 53 38 52 45 57 57 57 57 53 38 57 57 45 53 39 40 19 57 57 47 52 38 53 53 53 31 53 32 53 53 43 53 38 42 57 57 53 36 36 47 53 53 53 46 38 42 34 34 42 53 38 50 30 53 45 45 57 53 30 47 52 57 45 45 40 53 38 53 45 40 32 31 40 41 40 32 57 38 35 33 37 23 41 42 29 50 38 45 57 42 40 52 35 12 12 8 8 8 11 28 53 52 53 47 42 52 52 30 52 52 30 50 17 8 57 57 57 43 30 50 52 36 37 32 42 45 37 19 53 31 50 33 24 57 23 23 30 40 30 52 23 18 35 42 23 20 38 39 32 42 40 42 57 52 47 30 53 36 28 40 32 30 36 33 40 37 48 42 31 40 53 52 31 34 31 35 30 39 39 24 40 37 28 34 9 52 41 31 41 37 30 33 29 32 29 24 24 31 30 29 52 23 30 33 31 57 45 57 26 22 33 40 35 14 41 40 29 23 9 7 33 24 24 9 16 24 20 33 23 17 19 9 8 9 25 21 10 8 9 9 13 9 47 30 6 41 20 10 15 12 27 33 29 24 30 30 30 30 21 9 13 30 15 47 20 9 10 20 10 37 25 28 32 29 21 29 29 14 39 39 20 38 15 10 39 19 25 38 12 11 5 9 13 13 28 31 34 20 18 34 37 34 29 51 21 16 12 20 34 51 34 26 5 46 51 24 17 36 27 28 43 34 51 39 28 23 27 29 33 24 29 23 30 8 15 7 6 5 5 14 13 17 31 27 19 13 28 33 22 20 20 25 23 29 11 13 12 23 26 14 29 28 8 46 51 35 29 21 23 25 28 51 33 28 29 23 28 27 33 15 51 11 24 16 18 9 38 29 30 19 29 20 29 36 23 29 27 38 14 29 36 39 10 7 12 33 31 30 33 11 15 19 29 28 16 6 6 8 9 19 17 38 8 34 26 30 9 5 6 22 31 33 17 19 14 9 5 8 5 10 5 21 9 17 14 11 12 16 11 12 19 11 5 4 6 14 7 6 10 20 17 9 6 8 7 4 5 6 6 8 15	Open. Hide. 61 61 55 49 49 43 39 49 43 52 59 43 41 59 59 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 59 61 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 36 39 30 13 59 45 37 52 59 59 59 59 59 59 52 52 52 52 36 49 45 52 52 59 59 59 59 49 59 59 59 59 59 61 61 36 44 36 49 44 59 49 59 59 52 43 52 59 52 52 44 43 49 41 49 45 52 52 49 52 59 61 43 37 49 28 52 33 49 52 59 59 59 59 49 36 59 52 49 45 52 59 52 52 43 52 52 45 45 43 49 59 52 59 59 59 43 49 49 49 45 52 59 59 59 52 59 52 49 59 61 61 39 59 49 52 59 59 59 59 59 59 52 36 59 59 59 59 52 59 59 59 59 59 52 52 59 52 49 52 59 59 52 52 52 61 61 55 52 49 52 55 52 55 55 55 52 52 55 61 52 52 55 49 52 52 49 52 52 55 55 52 61 61 61 55 55 55 49 52 52 31 55 52 55 55 55 55 52 55 55 52 49 52 52 52 55 52 55 55 50 50 37 49 55 55 61 61 61 61 50 49 61 55 55 55 55 50 55 55 55 55 55 55 55 61 61 61 61 55 55 55 61 55 61 35 55 55 55 61 55 55 55 55 55 55 61 55 61 55 61 61 61 61 61 61 55 61 61 61 53 50 61 50 61 53 53 53 53 61 61 61 61 61 61 61 61 47 53 47 47 53 53 61 61 61 61 50 53 45 53 50 50 53 53 53 50 50 35 50 39 38 50 31 61 50 50 52 50 50 50 53 39 43 50 45 53 61 53 50 50 31 53 33 39 50 53 42 52 47 42 47 38 43 34 38 34 35 33 39 53 47 45 45 42 42 42 42 42 43 50 45 47 47 47 38 38 39 39 38 31 47 23 53 42 38 32 38 52 38 47 38 47 42 47 50 40 33 53 43 31 27 37 32 30 50 43 42 47 50 38 42 43 21 27 42 27 53 31 26 47 47 45 52 53 42 40 45 40 28 34 25 42 50 47 22 36 36 38 40 13 25 23 15 50 30 22 21 13 14 7 7 18 38 36 36 28 24 19 17 53 9 18 12 25 17 47 45 34 50 52 34 23 32 36 42 37 24 28 32 17 42 30 14 32 8 13 21 14 47 14 45 17 28 36 26 38 45 28 28 34 23 37 47 36 26 19 14 27 25 29 37 40 33 37 30 32 26 18 31 32 30 36 40 17 23 28 21 29 21 47 32 28 32 31 30 29 57 57 57 36 21 23 30 27 17 34 18 45 37 40 29 18 23 21 18 12 18 21 20 5 24 28 30 16 19 30 14 29 18 24 29 14 23 22 37 33 13 19 25 34 28 10 41 21 33 31 17 47 30 25 28 21 27 27 25 22 21 9 32 36 31 14 30 18 10 45 21 12 17 30 21 29 29 29 21 10 29 22 28 29 19 25 15 43 47 51 29 24 11 13 16 26 8 22 21 17 28 26 10 8 10 14 22 9 37 14 17 8 23

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_61220946_61221461
seq2: B6Ng01-156G18.g_587_787

seq1  TTTTCTTTTTTTATTATTTTTTGCTATCGAGAACAAGTATATTTGATTTT  50
                                                        
seq2  --------------------------------------------------  0

seq1  CTTTGTTGAGATGCTGAAGATGAATCCCAGTCATCACATCCTCATAGCCC  100
                                                        
seq2  --------------------------------------------------  0

seq1  ACTGCAAATATATTAATAAATGTTACTTATAAAGTTCATTTATGAAATTC  150
                                                        
seq2  --------------------------------------------------  0

seq1  TTTACTATTCAAAATATACAGAAATTAATTTCAAATATCATTTACCAAAT  200
                                                        
seq2  --------------------------------------------------  0

seq1  GACATTAATTTAGCGGTCAACATTGTTCCATACCCAACAATCAAAATAAT  250
                                                        
seq2  --------------------------------------------------  0

seq1  GTTTATCATGATACATAAATATTGACATAGATTGAAATATAAAGTCAAAC  300
                                                        
seq2  --------------------------------------------------  0

seq1  TTTGTATGGACATCATGCATTCTTTCTTTCTTTTTTCTTTATTCTTCTTT  350
                            ||| ||| ||| || ||| ||||  | |
seq2  ----------------------TTTTTTTTTTTATTATTTTTTCTCATAT  28

seq1  TTTTATTAGGTATTTTCTTCATTTACATTTCAAA--TATATCCCAAAAGT  398
      ||||||||| |||||||||||||||||||  |||    |||||  |||||
seq2  TTTTATTAGATATTTTCTTCATTTACATTAAAAAATGCTATCCTGAAAGT  78

seq1  CCCCCATACCTTCTCCCCAC-----TCCCCTACCCACCCACTCCCACTTC  443
      |||| ||||| || ||| ||     |||||||||||||||||||||||||
seq2  CCCCTATACCCTCCCCCAACCCTGTTCCCCTACCCACCCACTCCCACTTC  128

seq1  TTGGCCCTGGGGTTCCCCTGTACTGAGGCATATAAAGTTTGCAAGACCAA  493
      |||||||||| |||||||||||||  ||||||||| ||||||||||||||
seq2  TTGGCCCTGGCGTTCCCCTGTACTAGGGCATATAACGTTTGCAAGACCAA  178

seq1  TGGGCCTCTCTTCCCAATGATGG  516
       | |||||||||||||| |||||
seq2  GGAGCCTCTCTTCCCAACGATGG  201

BAC Information

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Search Result

BAC

BAC End Information

Alignment Information