BAC Information

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BAC

Clone NameB6Ng01-157J14
Chromosome3 (Build37)X (Build37)
Map Location 7,220,781 - 7,221,32753,388,615 - 53,389,510
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100041214, LOC383818, 1700008P02Rik, LOC100039349, Olfr289-ps1, EG667801
Downstream genePkia, LOC667807, 3110050N22Rik, Il7, LOC620822, LOC633072
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157J14.bB6Ng01-157J14.g
ACCDH951788DH951789
length990897
definitionDH951788|Mus musculus domesticus DNA, BAC clone: B6Ng01-157J14, 5' end.DH951789|Mus musculus domesticus DNA, BAC clone: B6Ng01-157J14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(7,220,781 - 7,221,327)(53,388,615 - 53,389,510)
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgttgtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgattttacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctagag
cttttagatgtgttgtcagctgctagtatgtgctctctccgtttttctga
aggcactcatagctatgagttcctcttagaatgctttcat
gaattcccaaaagactctcttactttgtttcagttgaaggggctgttgtg
tgtaattctaaattgttttatttatttaactaacgtggtttttgcatgtt
tgtatttatacaacacatgcatgactggggttcgtagaaaatagaagagg
atgccaaatcccctggatctagaattaaaaatggctgtgagccatcatgt
aggtcctaggaactaaaccttggttctctccaagagcaacaagtgctctt
aatttctaagccatctttccatccctgtcctgtgtgtgtttaaggtatgc
tggatcaatttctcttgataggtgtttatttttactatacagtggacatt
ataaaaatatgacactttcctaatattgtctatttccagaaaaagaaaaa
aaacaccataattttaatggattgtgtaaatcataaaaagagattcagca
aaaatgatgtgtatacatttcagtatatgtgtgcataaggaggccagaaa
tagacatctgctatattctcaatcatattccaacttatttttttttgggg
ggggtgtttttttgagacagggtttctctatatagccctggttgtcctga
aaactcaccctgtagaccagggtggcctcaaacagagaaatccccctgcc
ttggcctctcaaatgctgagatttatggcatgtaccaccattgcctgacc
taacttacatcttgagacagggttctctctgaatctgcagctcaccaatg
ccactagcctggctagccagcaagctgacaccacctactcagcactgggc
tgcagtctgcccttttaaagtgtattctaggccccccaccttagtccaat
accttcaaggtaaactctttaccaaaagaaccatctccctagccccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_7220781_7221327
seq2: B6Ng01-157J14.b_46_592 (reverse)

seq1  TTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATCCCCTAAAGA  50

seq1  AATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGGACCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGGACCAG  100

seq1  ACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAACTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAACTCCA  150

seq1  GTTCTGCACAAACTTTTTCACAAGATAGAAGTAGAAGGTATTCTACCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGCACAAACTTTTTCACAAGATAGAAGTAGAAGGTATTCTACCCAA  200

seq1  CTCATTTTATGAAGCCACTATTACTCTGATACCTAAACCACAGAAAGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTTATGAAGCCACTATTACTCTGATACCTAAACCACAGAAAGATC  250

seq1  CAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAACATCGATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAACATCGATGCA  300

seq1  AAAATCCTTAATAAAATTCTCGCTAACCGAATCCAAGAACACATTAAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCTTAATAAAATTCTCGCTAACCGAATCCAAGAACACATTAAAGC  350

seq1  AATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATGGT  400

seq1  TTAATATACGAAAATCCATCAATGTAATCCATTATATAAACAAACTCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATACGAAAATCCATCAATGTAATCCATTATATAAACAAACTCAAA  450

seq1  GACAAAAACCACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAA  500
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAAACAACATGATCATCTCGTTAGATGCAGAAAAAGCATTTGACAA  500

seq1  GATCCAACACCCATTCATGATAAAAGTTCTGGAAAGATCAGGAATTC  547
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAACACCCATTCATGATAAAAGTTCTGGAAAGATCAGGAATTC  547

seq1: chrX_53388615_53389510
seq2: B6Ng01-157J14.g_70_966 (reverse)

seq1  GGGGGCTAGGGAGATGGCTCTTTTGGTAAAGAGCTTACCTTGAAAGTATA  50
      ||||||||||||||||| ||||||||||||||| |||||||||| |||| 
seq2  GGGGGCTAGGGAGATGGTTCTTTTGGTAAAGAGTTTACCTTGAAGGTAT-  49

seq1  TGGACTTAAGGT-GGGGGCCTAGAATACACTTTAAAAAGGCAGGCTGCAG  99
      ||||| |||||| |||||||||||||||||||||||| ||||| ||||||
seq2  TGGAC-TAAGGTGGGGGGCCTAGAATACACTTTAAAAGGGCAGACTGCAG  98

seq1  CCCAGTGCTGAGTAGGTGGTGTCAGCTTGCTGGCTAGCCAGGCTAGTGGC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGCTGAGTAGGTGGTGTCAGCTTGCTGGCTAGCCAGGCTAGTGGC  148

seq1  ATTGGTGAGCTGCAGATTCAGAGAG-ACCCTGTCTCAAGATGTAAGTTGG  198
      ||||||||||||||||||||||||| |||||||||||||||||||||| |
seq2  ATTGGTGAGCTGCAGATTCAGAGAGAACCCTGTCTCAAGATGTAAGTTAG  198

seq1  GTCAGGCAATGGTGGTACATGCCTTAAATCTCAGCATTTGAGAGGCCAAG  248
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTCAGGCAATGGTGGTACATGCCATAAATCTCAGCATTTGAGAGGCCAAG  248

seq1  GCAGGGGGGTTTCTCTGTTTGAGGCCACCCTGGTCTACAGGGTGAG-TTT  297
      |||||||| ||||||||||||||||||||||||||||||||||||| |||
seq2  GCAGGGGGATTTCTCTGTTTGAGGCCACCCTGGTCTACAGGGTGAGTTTT  298

seq1  CAGGACAACCAGGGCTATATAGAGAAACCCTGTCTCAAAAAAACACCCCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAACCAGGGCTATATAGAGAAACCCTGTCTCAAAAAAACACCCCC  348

seq1  CCCAAAAAAAAATAAGTTGGAATATGATTGAGAATATAGCAGATGTCTAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAAAAAAATAAGTTGGAATATGATTGAGAATATAGCAGATGTCTAT  398

seq1  TTCTGGCCTCCTTATGCACACATATACTGAAATGTATACACATCATTTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGCCTCCTTATGCACACATATACTGAAATGTATACACATCATTTTT  448

seq1  GCTGAATCTCTTTTTATGATTTACACAATCCATTAAAATTATGGTGTTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAATCTCTTTTTATGATTTACACAATCCATTAAAATTATGGTGTTTT  498

seq1  TTTTCTTTTTCTGGAAATAGACAATATTAGGAAAGTGTCATATTTTTATA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTTCTGGAAATAGACAATATTAGGAAAGTGTCATATTTTTATA  548

seq1  ATGTCCACTGTATAGTAAAAATAAACACCTATCAAGAGAAATTGATCCAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCACTGTATAGTAAAAATAAACACCTATCAAGAGAAATTGATCCAG  598

seq1  CATACCTTAAACACACACAGGACAGGGATGGAAAGATGGCTTAGAAATTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCTTAAACACACACAGGACAGGGATGGAAAGATGGCTTAGAAATTA  648

seq1  AGAGCACTTGTTGCTCTTGGAGAGAACCAAGGTTTAGTTCCTAGGACCTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACTTGTTGCTCTTGGAGAGAACCAAGGTTTAGTTCCTAGGACCTA  698

seq1  CATGATGGCTCACAGCCATTTTTAATTCTAGATCCAGGGGATTTGGCATC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGGCTCACAGCCATTTTTAATTCTAGATCCAGGGGATTTGGCATC  748

seq1  CTCTTCTATTTTCTACGAACCCCAGTCATGCATGTGTTGTATAAATACAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTATTTTCTACGAACCCCAGTCATGCATGTGTTGTATAAATACAA  798

seq1  ACATGCAAAAACCACGTTAGTTAAATAAATAAAACAATTTAGAATTACAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCAAAAACCACGTTAGTTAAATAAATAAAACAATTTAGAATTACAC  848

seq1  ACAACAGCCCCTTCAACTGAAACAAAGTAAGAGAGTCTTTTGGGAATTC  896
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAGCCCCTTCAACTGAAACAAAGTAAGAGAGTCTTTTGGGAATTC  897