MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-162G05
Chromosome	X (Build37)
Map Location	43,039,191 - 43,040,099
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Wdr40b, LOC665585, 1110059M19Rik, LOC100040038, EG385346
Downstream gene	LOC100040075, Actrt1, EG245405, LOC665632
Link	Open Mouse BAC browser

Click to get alignment info.

name	Wdr40b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245404 MGI:2444462
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665585 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665585
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	1110059M19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68800 MGI:1916050
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 15 ESTs

name	LOC100040038 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040038
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG385346 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:385346 MGI:3644449
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040075 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040075
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Actrt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73360 MGI:1920610
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG245405 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245405 MGI:3647751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 130 ESTs, 8 Proteins

name	LOC665632 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665632
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 13 Proteins pseudo : _no_value

name	Wdr40b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802765 GeneID:245404 MGI:2444462
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 40B transcript_id : NM_178739.4

name	1110059M19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407347 GeneID:68800 MGI:1916050
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 15 ESTs product : RIKEN cDNA 1110059M19 gene transcript_id : XM_978018.1

name	EG385346 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271555 GeneID:385346 MGI:3644449
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG385346 transcript_id : XM_888120.2

name	Actrt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370294 GeneID:73360 MGI:1920610
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : actin-related protein T1 transcript_id : NM_028514.2

name	EG245405 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271556 GeneID:245405 MGI:3647751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 130 ESTs, 7 Proteins product : predicted gene, EG245405 transcript_id : XM_141727.9

name	Wdr40b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559840 CCDS:CCDS30101.1 GeneID:245404 MGI:2444462
definition	codon_start : 1 exception : mismatches in translation product : WD repeat domain 40B protein_id : NP_848854.2

name	1110059M19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407348 GeneID:68800 MGI:1916050
definition	codon_start : 1 product : hypothetical protein LOC68800 protein_id : XP_983112.1

name	EG385346 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83000958 GeneID:385346 MGI:3644449
definition	codon_start : 1 product : hypothetical protein protein_id : XP_893213.1

name	Actrt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386318 CCDS:CCDS30102.1 GeneID:73360 MGI:1920610
definition	GO_component : GO:0005856 - cytoskeleton [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : actin-related protein T1 protein_id : NP_082790.1

name	EG245405 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63744454 GeneID:245405 MGI:3647751
definition	codon_start : 1 product : hypothetical protein protein_id : XP_141727.3

name	LOC665585 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665585
definition	number : 1 pseudo : _no_value

name	LOC100040038 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040038
definition	number : 2 pseudo : _no_value

name	LOC100040038 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040038
definition	number : 1 pseudo : _no_value

name	LOC100040075 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040075
definition	number : 1 pseudo : _no_value

name	LOC665632 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271529 GeneID:665632
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 13 Proteins product : similar to laminin receptor pseudo : _no_value transcript_id : XR_031534.1

clone name	MSMg01-524G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296C07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-163L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138A20
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-162G05.b	B6Ng01-162G05.g
ACC	DH955238	DH955239
length	1,227	1,182
definition	DH955238\|Mus musculus domesticus DNA, BAC clone: B6Ng01-162G05, 5' end.	DH955239\|Mus musculus domesticus DNA, BAC clone: B6Ng01-162G05, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	acccatacctaaacatagtaaacacaatatatagcaaaccaatagtcaac atcaaactaaatggagagaaacttgaagcaatcccactaaaattagggac aagacaatacagcctattctttccctatctactgaatatagctctcaaaa ttctatctagagaatttagaaaacaaaaggaggtcaaagggatacaaatt gaaaagggagaaatcaaaatatcactatttgcagatgatatgatagtata tttaagtgtcccagaaaattccaccaaagaactcctacatctggtaaaca acttcatcaaagtggttggatagaaaattaactcaaacaaatcagtagcc ttcctctactcaaaggataaatgagctgagaaagaaattaggaaaatgtc acccttcatagtagtcacaaaggatataaaatatcttgctgtgactcaac caagaaagtgaaagatctatagacaaagccttcaactccctaaaggaaaa aaaaatcaaagaaaccctcatcagatgaaaatatctccaatggtcatgga ctggcaggattaatatactaaaaatggacatcttgacaaaagcaatctat agcttcaatgcagtccccttcataattccaactccattcttcatagagtt agaaagagcaatttccaaattaatgtagaataacgaaaaacacaggatag caaaaagtatgctcaaaaataaaagaccttcttggggaaggaatcaccat acctgacctcaatctatattagagagaaatactgataaaaagtgtatgat attggtgcagagacagacaggtagatgaagggaatcaaactaaagaccca gaaatgaacccccactcctatggtcacttgatctttgacaaaggagctaa aaccattgtcttagtcaggtttctattcctgcacaaacctcagaccagaa acaagttggggaggaaagggtttattcggcttacacttccataactgctg ttcatcacagaagcagactggaactccagcagtcagaagcaggagctgat gcgagcatggagggatgttctttactgctgcctcacctgctgctcagctg ctttcttttagaccagacatacagccaagatgttccacccacaaggcctt tcctggatactaatggaaatgctacggtattcatgagcattcccactgag tccttcctagataactccagccgtggt	gaattcttcatttagctctgtaccccatttttaaattaggtatttatttc atttacatttccaatgctatcccaaaaagtcccccatatcctttcccaca ctcccttacccacccactcccacttcttggccctggcattcccctgtact gaggcatataaagtttgcaagaccaatgggcctctctttctaatgatggt cgactaggccatcttctgatacatatgcagctagaaacacgaggtctggg gggtactggttatttcatattgttgttccaactatagggttgcagacccc tttatttccttgggtactttctctagctcctccattaggggccctgtgat ccatccaatagctaactgtgagcatccatttctgtgtttgctaggcccca gcatagcctcacaagagacagctatatctgggtcctttcatcaaaatctt gctagtgtatgcaatggtgtcagcatttggaggctgattatgggatggat ctcccccgggtatggcagtctctagatggtccatcatgataagaacttca agtctctgaagaaagaaattaaagaagatctcagaagatggaaagatctc ccatgttcatggattggcagaatcaatatagtaaaaatggctatcttgac aaaagcaatctacagattcaatgcaatccccatcaaaattccaactcaac tcttcaacaaattagaaaggccaatctgcaaattcatctggaataacaaa aaacctaggatagcaaaaaatcttctcaatgcattttctttgatgtcctt cagaaaaaaattttactcagtatctcaaatgaaaatatttatttcagaat agctccctttagttcatttattactccatacttgatataaaattaaatga tataattttgtataggtgcctaagaatacagatatcaaaataaaacagaa atgatgctttttttatcaaaggaaaaaaatatttagatcactacacatag ttgtgagatgaaaggaacaaattattttaggaaacactctgtgctctgaa tatagaactttcttgtttaatttcttgcccattaaaccaagatattgcaa tatttacccaagcgactatgggaagatcaaactagaaaattgtgaaaaat aaaccaaaacattataataattatcctgacaa
quality values	Open. Hide. 47 31 61 47 33 61 61 61 61 61 61 61 61 55 55 61 61 61 16 20 19 23 31 14 18 12 18 18 22 31 36 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 50 55 37 44 55 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 45 61 53 61 61 61 61 61 61 53 61 61 61 61 61 39 61 61 57 53 53 57 53 57 57 57 53 53 57 57 53 53 53 47 57 42 32 51 53 57 53 57 53 57 57 57 57 57 57 47 57 47 57 57 57 53 53 57 53 53 57 57 53 53 50 57 57 57 53 53 53 53 47 57 53 53 57 57 57 57 57 57 53 31 57 53 57 53 53 53 53 53 57 47 57 57 57 53 50 45 53 53 36 47 45 45 34 57 53 53 53 41 32 46 57 53 50 57 52 45 53 52 40 57 45 37 39 45 45 53 57 57 50 57 45 52 57 47 35 57 53 50 53 32 43 42 37 52 45 53 41 37 34 53 50 57 53 38 39 53 43 38 52 57 57 57 50 39 42 53 37 52 57 35 30 53 37 52 37 57 57 57 53 33 38 40 35 40 34 52 50 29 57 57 57 36 25 37 52 57 52 25 52 23 47 40 48 48 41 40 53 38 38 36 40 36 14 41 36 37 28 47 35 39 46 30 53 36 53 53 42 53 32 24 45 41 48 31 37 37 53 40 35 40 37 41 48 41 27 53 35 45 30 33 57 31 33 35 40 37 53 32 34 26 51 51 51 47 29 30 38 28 35 29 31 41 21 30 35 38 34 31 29 34 35 25 14 46 26 32 30 23 30 34 28 29 24 36 23 35 32 26 18 28 29 30 30 51 29 28 33 28 34 34 51 29 28 37 28 51 30 18 30 21 39 39 20 22 46 51 24 23 29 29 31 26 43 43 43 41 29 29 33 29 33 34 28 29 34 29 20 34 26 35 29 32 28 28 21 29 32 51 29 26 28 22 26 51 26 18 20 35 23 33 29 26 46 51 29 27 27 29 28 24 26 17 33 20 25 29 19 29 34 7 12 11 19 51 29 25 24 28 24 27 21 25 29 24 20 17 23 17 51 29 18 19 29 26 6 5 13 19 12 32 7 29 38 23 16 19 23 27 26 16 26 44 34 20 32 12 34 22 51 19 11 51 19 17 37 14 21 15 23 25 25 19 10 26 27 16 15 17 21 28 33 20 30 15 24 7 5 6 14 30 15 26 20 9 33 16 13 25 23 12 14 8 4 3 21 12 29 10 31 8 17 22 19 14 11 15 15 9 6 11 22 9 21 5 15 5 19 9 21 7 23 18 29 15 14 9 20 7 18 25 22 29 18 23 4 2 3 6 10 10 14 24 11 25 11 36 23 23 13 14 15 15 8 20 26 5 5 9 9 17 6 12 16 12 8 11 9 5 9 19 15 27 11 16 8 7 5 3 10 5 11 7 18 7 4 24 17 5 9 13 6 4 7 6 21 6 4 3 1 18 6 6 11 4 20 6 8 11 10 4 5 4 7 4 18 4 5 20 17 4 15 22 12 3 4 6 3 4 4 7 7 9 30 7 9 4 3 3 5 12 10 5 16 4 4 4 13 6 7 4 13 13 4 9 12 14 7 3 4 3 6 6 16 5 5 6 6 12 4 10 4 5 9 2 2 2 4 12 5 6 9 16 6 6 18 4 5 2 6 7 6 4 11 12 5 6 8 4 4 7 18 6 7 6 7 3 3 5 11 3	Open. Hide. 59 59 59 59 61 61 61 19 24 12 20 24 22 10 10 18 26 44 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 59 52 59 36 55 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 44 44 44 44 55 55 59 61 61 61 59 59 61 61 55 55 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 59 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 59 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 44 52 49 52 61 61 61 61 61 52 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 59 61 59 59 59 59 59 59 59 61 61 61 59 61 59 33 43 45 37 44 35 59 59 59 61 61 59 45 39 44 36 49 44 61 49 59 59 59 52 59 59 39 49 59 52 52 59 49 52 59 61 59 59 59 59 45 39 59 59 59 59 59 59 59 59 59 59 59 55 59 59 52 52 55 44 44 49 59 59 59 59 59 59 59 59 59 52 36 49 45 52 52 59 59 45 43 49 45 45 43 59 59 59 52 59 59 59 61 52 59 59 59 59 59 52 59 59 52 49 52 52 52 37 59 59 59 49 43 52 59 41 59 59 43 52 41 52 52 52 39 61 59 59 59 52 59 52 59 59 59 59 59 59 52 52 52 55 55 55 55 55 52 39 52 55 55 61 49 61 61 55 55 52 55 49 52 43 55 37 55 52 52 52 55 55 55 55 52 55 55 55 55 55 52 52 52 55 55 55 55 55 52 55 55 55 50 55 50 50 55 50 55 61 55 61 61 50 50 61 50 50 55 55 50 50 50 50 61 47 49 55 50 55 47 55 61 50 55 55 50 55 50 55 50 55 49 50 50 50 49 50 50 55 55 55 50 55 47 53 50 53 53 53 47 50 53 50 52 53 50 61 61 50 53 47 61 61 50 50 50 50 53 61 61 61 53 52 61 53 61 61 50 61 61 50 61 61 52 53 61 43 50 53 61 52 61 47 61 61 53 45 31 24 27 50 45 61 53 61 53 61 53 43 61 53 53 52 61 53 38 40 53 53 53 53 45 61 61 45 52 34 61 53 61 40 30 61 42 31 61 22 53 53 52 42 53 45 41 27 53 53 53 53 57 47 47 57 50 50 53 34 53 57 57 35 45 53 57 47 45 53 52 57 38 42 53 42 52 53 50 45 43 38 36 47 53 47 45 45 42 53 39 38 52 42 47 53 53 53 53 33 47 24 47 53 53 24 42 19 35 45 50 40 41 50 50 53 45 23 52 38 23 52 36 57 52 43 32 39 47 45 47 43 28 50 39 52 53 53 52 33 36 33 50 24 52 47 47 36 27 34 36 41 42 38 30 30 10 28 45 28 53 45 42 43 32 24 53 47 32 32 47 25 53 30 36 42 50 38 45 30 37 53 34 35 33 40 23 35 33 37 53 39 37 39 30 28 40 34 21 50 57 53 53 40 19 34 25 36 16 37 31 18 32 33 29 22 52 53 53 52 53 36 38 14 57 40 36 42 25 37 37 37 31 19 18 57 57 36 41 28 57 40 20 33 23 30 27 36 31 19 19 31 27 6 43 57 53 53 53 53 35 21 57 57 34 25 20 11 24 20 31 35 31 33 37 34 27 35 38 36 31 36 33 44 37 9 8 26 29 30 27 17 17 47 6 23 14 18 32 39 29 33 16 32 37 35 51 31 26 30 30 36 25 30 14 29 27 27 47 32 27 25 15 21 35 28 29 31 12 16 18 44 28 29 30 15 10 26 29 34 46 48 38 31 34 32 45 30 23 29 37 23 21 24 13 27 26 51 46 29 18 9 29 23 23 31 23 13 18 15 36 20 28 46 20 30 41 26 19 29 14 23 34 17 20 29 28 43 51 51 41 27 20 29 29 25 19 12 7 22 39 26 28 38 31 22 31 12 5 39 51 51 46 51 29 15 25 29 15 32 7 6 8 17 5 5 9 17 46 27 19 31 6 51 33 33 6 29 29 20 15 22 17 23 28 9 24 5 8 8 30 26 5 7 7 15 29 23 20 9 13 5 10 8 38 28 17 19 26 16 31 18 6 6 13 19 38 34 32 6 10 10 28 38 25 15 8 20 23 20 12 24 10 12 8 12 33 9 31 33 8 6 6 12 5 4 8 24 8 17 35 9 8 21 5 14 5 18 8 9 6 16 19 9 20 7 26 26 21 6 3 4 6 10 15 29 14 9 13 9 5 6 16 9 8 21 25 17 5 16 8 5 6 29 33 6 5 5 25 7 13 4 7 4 4 5 20 13 15 29 7 20 11 6 4 4 3 15 5 5 5 4 5 10 10 7 24 27 26 9 5 6 9 5 8 14 25 36 26 10 5 17 8 6 5 3 4 26 27 8 8 4 17 8 8 5 11 3 4 4 6 11 4 10 5 17 13 7 10 6 6 9 23

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_43039191_43040099
seq2: B6Ng01-162G05.g_347_1249

seq1  AACTATAGGGTTGCAGACCCCTTTATTTCCTTGGGTACTTTCTCTAGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATAGGGTTGCAGACCCCTTTATTTCCTTGGGTACTTTCTCTAGCTC  50

seq1  CTCCATTAGGGGCCCTGTGATCCATCCAATAGCTAACTGTGAGCATCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTAGGGGCCCTGTGATCCATCCAATAGCTAACTGTGAGCATCCAT  100

seq1  TTCTGTGTTTGCTAGGCCCCAGCATAGCCTCACAAGAGACAGCTATATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGTTTGCTAGGCCCCAGCATAGCCTCACAAGAGACAGCTATATCT  150

seq1  GGGTCCTTTCATCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCTTTCATCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCATTTG  200

seq1  GAGGCTGATTATGGGATGGATCTCCCCCGGGTATGGCAGTCTCTAGATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGATTATGGGATGGATCTCCCCCGGGTATGGCAGTCTCTAGATGG  250

seq1  TCCATCATGATAAGAACTTCAAGTCTCTGAAGAAAGAAATTAAAGAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCATGATAAGAACTTCAAGTCTCTGAAGAAAGAAATTAAAGAAGAT  300

seq1  CTCAGAAGATGGAAAGATCTCCCATGTTCATGGATTGGCAGAATCAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAGATGGAAAGATCTCCCATGTTCATGGATTGGCAGAATCAATAT  350

seq1  AGTAAAAATGGCTATCTTGACAAAAGCAATCTACAGATTCAATGCAATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAAATGGCTATCTTGACAAAAGCAATCTACAGATTCAATGCAATCC  400

seq1  CCATCAAAATTCCAACTCAACTCTTCAACAAATTAGAAAGGCCAATCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAAAATTCCAACTCAACTCTTCAACAAATTAGAAAGGCCAATCTGC  450

seq1  AAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAAATCTTCTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAAATCTTCTCAA  500

seq1  TGCATTTTCTTTGATGTCCTTCAGAAAAAAATTTTACTCAGTATCTCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTTCTTTGATGTCCTTCAGAAAAAAATTTTACTCAGTATCTCAAA  550

seq1  TGAAAATATTTA-TTCAGAATAGCTCCCTTTAGTTCATTTATTACTCCAT  599
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGAAAATATTTATTTCAGAATAGCTCCCTTTAGTTCATTTATTACTCCAT  600

seq1  ACTTGATATAAAATTAAATGATATAATTTTGTATAGGTGCCTAAGAATAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATATAAAATTAAATGATATAATTTTGTATAGGTGCCTAAGAATAC  650

seq1  AGATATCAAAAATAAAACAGAAATGATGC-TTTTTTATCAAAGGGACAAA  698
      ||||||| ||||||||||||||||||||| |||||||||||| ||| |||
seq2  AGATATC-AAAATAAAACAGAAATGATGCTTTTTTTATCAAA-GGAAAAA  698

seq1  AATAATTTAGATCACTACACATAGTTGTGAGATGTAAGGAACAAAATTAT  748
      ||| |||||||||||||||||||||||||||||| |||||||||| |  |
seq2  AAT-ATTTAGATCACTACACATAGTTGTGAGATGAAAGGAACAAATTATT  747

seq1  TTAGGAAACACTCTGTGCTCCTGAATAT-GAACTTTCTTG-TTATTTCCT  796
      ||||||||||||||||||| |||||||| ||||||||||| ||| || ||
seq2  TTAGGAAACACTCTGTGCT-CTGAATATAGAACTTTCTTGTTTAATTTCT  796

seq1  TGCCACATTAAACCAAGATATTGCAATTATTACCAAAAGGCACTATTGGA  846
      |||| ||||||||||||||||||||||  |||||  |||  ||||| |||
seq2  TGCC-CATTAAACCAAGATATTGCAATATTTACC-CAAGCGACTATGGGA  844

seq1  TGTATCAACACTAG-AAATTGTGAAAAATAAACACAAATCATT-TAATAT  894
       | ||||| ||||| |||||||||||||||||| |||| |||| ||||| 
seq2  AG-ATCAA-ACTAGAAAATTGTGAAAAATAAAC-CAAAACATTATAATA-  890

seq1  ATATAATCCTGACAA  909
        || ||||||||||
seq2  --ATTATCCTGACAA  903

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information